LOC120571051


Basic Information

Item Value
gene id LOC120571051
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 37375792 ~ 37378767 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039819752.1
TCCTTCTACCcttccctgtgaagagtgaagatgatgaagaggaagGGCTTCATCGGAGACAAActgaacacatggaaacagaagctgatggagaggactgtggaggaccagaaccagccaggaactcacatccacttttacaaccagagactgatgATAGTGTTGATAGCGATTTCTGGAAGGAGAGCAGAAAACGTCCGACATGTTTGAACTCTCTGGAACATGAGGAAGTTCCTGTCAGTGCTGACAAAGAAAAAgattcaagatgtaagaaaacattcagctgctctgagtgtgggaaaagatttggcCGCAAGACACGCCTAAATAGACACATGAAAtgtcacacaggagaaaaacctttcagctgctcagtttgtaaaaaATCTTTTTCAGAGAATGGAagtttacagaaacacatgcgagtccacacaggagagaaaccattcacctgctcagtttgtaagagACATTTTGCATGGAAAGGACATTTTCAGAgtcacatgagaatccacactggagagaaaccTTACAGCTGCTCATTCTGTGATAAAGCTTTCCGTGAAAGTGGAAATCTTAAGAGACACATGGCcctccacacaggagagaaaaaataCGCCTGCAGTTTTTGTGACGAAAAATTCACCTGGCCTCAACAGCTCAAAACCCATCAGTGTGTTAGTCGACATCTGCAACCAGAGACTggagaccagactggagactcttctgaacctgagactgatgacagtgctgattggaaggagaccagagaacctcagtcagctttaaactctctgaaacatgaatCAAGATGTAAGAAaccattcagctgctctgagtgtgggaaaagatttggcACCAACGCACAtttgaagagacacatgataaCTCATACAGGTGAGAAagctttcagctgctctgattGTGGGAGAAGATTTGGCCGTAAGGCACATCTGCAAGAACACATGATGACTCACACAGGGGAGAAACCATTCAGCTGCTCAGATTGTGGGAAATCTTTTGTGTGGCGAGGACGTTTGTTGAAACACATGAGCATCCACACAGGCGAGATCCCTTTTGGCTGCTCATTTTGTGATAAAAGATGTTGGCACAAGTCGgatctgaagagacacatgatgactcacacgggagaaaaacctttcagctgctcagagTGTGGAAAAAGATTTATACAGAGGGCGCAGCTGACTCAACACGTTACGGTTCACACAGGGGAGAAAAATTACAGCTGCAGCGTTTGCGATAAAACATTTGCCTGGGCTTCGCAGATCAAAAGACACAAATGTGTCGGCCGTCAGTCGTCACAGCTTCGTCAAACTGAGGAGAACAGAGAGGCAGAGCCTCCGGCCAGCAGAGACCCTGAGAGCTGCAGCTCATAACACTTATCTGATAGCTCCTTGACTCCTAGGTCCttggctgaaccggaagttgttccgtccctcctcggtgagggccgtctcaaagctcttatttctgcccagAGGACCaaggagggatcatcgaggagctatacgcgaggatacagagagcagccttcctggaagccatgcagctgaaggagttgctaactccgcccaatcAGCTGACGTATTCATGTTggcgcttcagaggaaaggaggtCTCATCTCCttttgcctctctcctcccgcGATTTCCTCGCGTCTCTCCCATGCCTCCtcgtgggagggactaagacgcgaggaagggaggcaagtggaggactcgAGGAGGCAATATAAGGGACATAAGAAGCACcttatatccttgacgttccaagtccgggattgctccggtgccgcaggaaattccgccggatgcacgtcttttcggccggatgtccgtccccttcctcttcctttgtgttggcgttctaacctctggtggatttgtgaggactatggttaactgctcctcagatctctgcagggtaaatccagacagctagctagactatctgtccaatctgagttttctgttgcgcgACTACAACTACAAAGCAAGTTCAACATCCTCAGGATATCTTTGCATTGTCACGCTTCACTGaccctttttttcataaatttggtTCAACGGGatttatattgtattatgtGTTTTATTATGAGTTATTTAACATAAATCAACATCTAACTGTGAACTGATGTGTCTGAATCTTCCAGCGGCATTAAATAACACAGGGAATCCCTGCGGGGAAagagactggagactcttctgatcctgagactgatgacagtgctgattggaaggagaccagagaacctcagtcagctttaaactatGGAAATAAATCCATGTGTGAAGAAAGACTGGcagcagagagacacaaactgTCCACTGGTGTCACTAGCTGCTTTTGAGTGATATCTATTTAGGCCGTTTACACGTAcgtggttattttgaaaaacggagacatttcccttcgtttgtgcccttcgtttacacgcaaacggagaattcacctctgaaaacgagtctt

Function

GO: NA

KEGG:

id description
ko04139 Mitophagy - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039819752.1 True 2497 mRNA 0.47 2 37375792 37378767

Neighbor

gene id symbol gene type direction distance location
LOC120570984 NA coding upstream 45332 37327579 ~ 37330460 (+)
LOC120570982 NA coding upstream 95058 37279721 ~ 37280734 (+)
LOC120571054 NA coding upstream 115364 37259271 ~ 37260428 (+)
LOC120571061 NA coding upstream 150339 37207712 ~ 37225453 (+)
LOC120570980 NA coding upstream 188614 37152032 ~ 37187178 (+)
LOC120570985 NA coding downstream 6475 37385242 ~ 37400200 (+)
LOC120571071 NA coding downstream 57489 37436256 ~ 37437358 (+)
LOC120570987 NA coding downstream 79821 37458588 ~ 37476591 (+)
LOC120570988 NA coding downstream 99783 37478550 ~ 37492543 (+)
LOC120571065 NA coding downstream 128255 37507022 ~ 37508696 (+)
G139303 NA non-coding upstream 27398 37346709 ~ 37348394 (+)
LOC120571081 NA non-coding upstream 54897 37309014 ~ 37320895 (+)
G139292 NA non-coding upstream 122229 37253029 ~ 37253563 (+)
LOC120571082 NA non-coding upstream 126171 37228845 ~ 37249621 (+)
LOC120571093 NA non-coding upstream 155859 37211896 ~ 37219933 (+)
G139308 NA non-coding downstream 35581 37414348 ~ 37415199 (+)
G139307 NA non-coding downstream 67947 37446714 ~ 37449255 (+)
G139140 NA non-coding downstream 163472 37542239 ~ 37543053 (+)
G139165 NA non-coding downstream 174724 37553491 ~ 37554500 (+)
G139326 NA non-coding downstream 175984 37554751 ~ 37555980 (+)
G139141 NA other upstream 85 37117386 ~ 37375707 (+)
G139152 LOC104963332,LOC104942256,LOC104953734,LOC104948352 other upstream 259321 37067758 ~ 37116471 (+)
G139139 NA other upstream 319070 37047001 ~ 37056722 (+)
LOC120571069 NA other upstream 386095 36987953 ~ 36989697 (+)
LOC120571613 NA other upstream 843257 36526529 ~ 36532535 (+)
LOC120571062 NA other downstream 21525 37400292 ~ 37422427 (+)
G139164 NA other downstream 64625 37443392 ~ 37446584 (+)
LOC120570989 NA other downstream 118867 37497634 ~ 37523132 (+)
G139586 LOC104948352 other downstream 307771 37686538 ~ 38256966 (+)
G139581 NA other downstream 1047983 38426750 ~ 38430454 (+)

Expression


Co-expression Network