LOC120571065


Basic Information

Item Value
gene id LOC120571065
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 37507022 ~ 37508696 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039819769.1
tgaacctgagactgatgacagtgctgattggaaggagaccagagaacctcagtcagctttaaactctctgaaacatgattcaacatgtaagaaaacattcagttGCTCTGAGTGTGAGAAAAGATTTGGGACCAAGGCACACCTGAAgacacacatgagaactcatacaggagagaaaacttttagctgctctgagtgtgggagaagATTTGGCCACAAGCAAcatctgaagagacacatgataactcacacaggagagaaaacattcagctgttcTAAGTGTGGGAGAAGGTTTGGCCAAAGGGGACacctgaagagacacatgataactcacacaggagagaaacctttcagctgcccAGTCTGCAAGAAATCttttacagagagaggaagtgtaaagacacacatgagaatccacacaggagagaaaccttttaTTTGTTCTGAGTGTGGGAAACAATTTAGCTACAAGTCATATTTGAAGACTCACAtgataactcacacaggagagaaagctttcagctgctcagtctgtaagaaatctttgGCAGATAGGAGAAGTGTAAAggcacacatgagaatccacacaggggaggaaccatttagctgctctgagtgtggaaACAGATTTGGGACCAAGGAATACCTGAAGACACACTTGATGACTcatacaggagaaaaacctttcagctgctcggTCTGTAAGAAATCATTTACACGCAGTGGAAGTTTAAAGATGCACATGATAACTCATACAGGAGAGAAAAcgttcagctgctctgagtgtgggagaagATTTGGCTACAAGACACacctgaagagacacatgagaactcacacaggagagaaacctttcagctgctcggTTTGTGATCAAAGATTTAACCTCAACGCAAATCTGAAGActcacatgagaactcacacaggagagaaagctttcagctgctcagtctgtaagaaatcttttagaCAGAGGAGCCATTTAAAATATCACATGAAACAACACACAGGAGAGGAACCGTCTACTTCCTGTGTTAGTGacatcagagagcagcagaaGTGGAGCTCCAGTGGGGACCAGGAGCAGCCAGAGAATCTCAGCCAGGTTGGAACTTCAGTATAAGCCGACTTCTGGCGAGTCGCGGAGCTGAGGCTAAATGAGTCACATTAACTTCATccttcatccacacaaagcacactgCTATCACCACGACTAACCGCTTTATTGGGCTCGTTTTCTGTGAACGATGTGGCGAGTTGGTGACATTAAagcggagttagcaagctaatgttagccaaaTAACAAGTTGTTCTCCGGCTGGCTGGTTCTGCCGTGCTGTCATGCTGCATCggttacagagaatgagctgaacagcgggctgggtGACCGCTGACCCGTTGTCGCTGGGTCTGACTGCCCCCCCTCGCTCCCCGCAACTCTGAGAACATCTCCCGAGCTGCGTTGGGCGGCTCTCCTCCCAGCGAGCTGCGACACCGTTTACGGCCTCACTGACGCGTATTGTCACCATGGCAACTTACAACAATGGCCATTTCGTTGTGTACCAATCAAATGACCAAGGGAAACAGTTCactggcctttctatccattttaatCTATGCTCTGAACGCTGTAATCTGTAAACTGTGGATGCTGATCTCTAcgtaaagcgtaact

Function

GO: NA

KEGG:

id description
K09191 GTF3A; general transcription factor IIIA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039819769.1 True 1675 mRNA 0.46 1 37507022 37508696

Neighbor

gene id symbol gene type direction distance location
LOC120570988 NA coding upstream 14479 37478550 ~ 37492543 (+)
LOC120570987 NA coding upstream 30431 37458588 ~ 37476591 (+)
LOC120571071 NA coding upstream 69664 37436256 ~ 37437358 (+)
LOC120570985 NA coding upstream 106822 37385242 ~ 37400200 (+)
LOC120571051 NA coding upstream 128255 37375792 ~ 37378767 (+)
LOC120570990 NA coding downstream 19009 37527705 ~ 37551898 (+)
LOC120570991 NA coding downstream 104425 37613121 ~ 37616487 (+)
LOC120571056 NA coding downstream 829741 38338437 ~ 38340755 (+)
LOC120571002 NA coding downstream 929976 38438672 ~ 38440490 (+)
LOC120571053 NA coding downstream 954313 38463009 ~ 38465285 (+)
G139307 NA non-coding upstream 57767 37446714 ~ 37449255 (+)
G139308 NA non-coding upstream 91823 37414348 ~ 37415199 (+)
G139160 NA non-coding upstream 123050 37306166 ~ 37383972 (+)
G139140 NA non-coding downstream 33543 37542239 ~ 37543053 (+)
G139165 NA non-coding downstream 44795 37553491 ~ 37554500 (+)
G139326 NA non-coding downstream 46055 37554751 ~ 37555980 (+)
LOC120571095 NA non-coding downstream 48116 37556812 ~ 37565069 (+)
G139327 NA non-coding downstream 50811 37559507 ~ 37559854 (+)
G139164 NA other upstream 60438 37443392 ~ 37446584 (+)
LOC120571062 NA other upstream 84595 37400292 ~ 37422427 (+)
G139141 NA other upstream 131315 37117386 ~ 37375707 (+)
G139152 LOC104963332,LOC104942256,LOC104953734,LOC104948352 other upstream 390551 37067758 ~ 37116471 (+)
G139139 NA other upstream 450300 37047001 ~ 37056722 (+)
G139586 LOC104948352 other downstream 177842 37686538 ~ 38256966 (+)
G139581 NA other downstream 918054 38426750 ~ 38430454 (+)
G139594 NA other downstream 1084879 38593575 ~ 38594662 (+)
LOC120571012 cct3,LOC102778987,LOC105012686 other downstream 1428050 38936746 ~ 38957569 (+)
G139838 NA other downstream 1464014 38972710 ~ 38999473 (+)

Expression


Co-expression Network