LOC120571393


Basic Information

Item Value
gene id LOC120571393
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 35197333 ~ 35214312 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039820323.1
gagagtttGAGAATAAAAAGCTGCTGCTCTGTTTGAGAGGAAATCAGAAACTCAGTTCTGTGAAATCTGTTTGCTGTCGACCTGAAGAACCAGAAAAATGCTCCAACGgtGTGTTTTGTTGCTGCTCGTTGCCATTGCAGCAGTTTCTCTCGCAGCTCCAGTCCCAGAGGGAACAACAGCTGACGATAGAAGTGCACCGCTGCTGGATCACATAAACAAcgATGCTACTGAGAGCCCAAGATCTGATGGACAGACTCAagCTGCTGCTCCTGTGAGCCCAGAGACTCAAGATGTTGCTGACAGCGGCGCCTCTGATGAAGaTTCAGCTGCAGCAACTCAAGCACAAGATCCCGAGGACGATTCTGCTAAAAGTGACGACAACAGTGACGAGAAGTTGATCACTGACTCTGACTCTGAGACAGACTCTGACTCTGACTCTAAGACAGAGACTGACGATGACTCTGAGGAAGACTTACTAAAACCAGATGATAGCATCAGCAAAGATGATGACAGCCAGGAGGTGGAGGGGGATGACATAGGGAGTGATGAACAAGCAGATGAGAAGGAAGTGAAGGAAGAGGGAGATAACTCTGATGCTAAGACTGATTCTGAGGATGAGTCTAACGGTAagactgattctgattctgatgaagGGTCTGACACCAAGACTGATGCTAAGACTGATTCTGATGAAGGGTCTGACACCAAGACTGATGCTAAGACTGATTCTGATGAAGGGTCTGACACCAAGACTGATGCTAAGACTGATTCTGATGAAGGGTCTGATGCTAAGACTGATGCTAAGACTGATTCTGATGAAGGGTCTGATGCTGAGACTGATGCTAAGACTGATTTTGATGAAGGGTCTGATACTAAGACTGATGCTAAGACTGATTCTGATGAAGGGTCTGATGCTAAGACTGATGCTAAGACTGATTCTGATGAAGGGTCTGACACCAAGACTGATGCTAagactgattctgattctgacgaTGATTCTGATGAAGGGTCTGATACTAAGACTGATGCTAAGACTGATTCTGATGAAGGGTCTGATGCTAAGACTGATGCTAAGACTGATTCTGATGAAGGGTCTGACACTAAGACTGATGCTAAGACTGAGACTGATTCTGATGATGATTCTGATGAAGGATCTGACTCTCTGGTTGGTGATGATTCTGACGCTAAGACTGATTCTGACGATGATTCTGATGCTAAGACTGATTCTGGGGAAGTGTCTGACGCTAAGACAGGGTCTGACTCTCTGGTTGACGATGATTCTGACGCTAAGACAGGGTCTGACTCTCTGGTTGATGATGATTCTGATGCTAAGACAGGGTCTGACTCTCTGGTTGATGATGATTCTGATGCTAAGACAGGGTCTGACTCTCTGGTTGAAGATGATTCTGACGCTAAGATAGATTCTGACGATCAGACTGATGCTGAGGCTGACGTACTAAAACCAGATGATAGCATCAGCCAGGACACTAACAGCCAGATGGAGGGGGGCGAAGCAGGGAGTGAGGAACCAGCAGAGGTGGTAGGGGAAGATAAGGTAGAGGGAGGTGAAATTGATCCTATAATGTCAGATGATGACAGCATAAGCGATGACAAAGACGTTACTCTGAGTGACGAAGACAGTCAGACTAATGGTGAAAACGGCAAACCTGGGCCAGAGAACAAGGGCATCAATGACACACAAGACTCTGTGGAGGTGATTCAGGACAACTATGCAAACTCGGACACTGTGGAACCAAAGGAGCAGAGTCCAGAAACTCCCATCTCCACTAAAGAGCCATCTGTCGACCAACCAGACAAACCGGACAACTCCACCTCCACCACCGCAAAGGcTGTGAATTAGACGCCCAGCCTCTGAACTGTGGAAGCTCACCGACTGCAGAGTCGAGTCCGCAGTGGAACACAGTTGCAACATCTTGAACAAGCTAAACTGCAACTAAACTTCGACCTTAAGCTTCCTGGTTTCACCTCTGCTCCTTCCTGATTGGTTGTCTCCGCTTTCTTCAAACTCTGGCTTTGGTTTAGAAAAATCTGTCTTCCACCAATCAAATCTCTGTCTgtaatctgtctgtctgtctatctgtctgtctgtctgtctgtctgtctgcccatCTGTCcccctctctgcctgtctgtctgcccgtgtgtctctctgtctgcccaTCTGTCcccctctctgcctgtctgtctgcctgtctgtctgtctgcccgtCTGTcgctctgtctgcctgtctgtctgtccctctgtgtcACATTAAACCatctgttctgtttttgtgttcAGAAGAATTGCTAATAAAGTTTGAACTGTCAAAACTTCTCTCACTGC
>XM_039820324.1
gagagtttGAGAATAAAAAGCTGCTGCTCTGTTTGAGAGGAAATCAGAAACTCAGTTCTGTGAAATCTGTTTGCTGTCGACCTGAAGAACCAGAAAAATGCTCCAACGgtGTGTTTTGTTGCTGCTCGTTGCCATTGCAGCAGTTTCTCTCGCAGCTCCAGTCCCAGAGGGAACAACAGCTGACGATAGAAGTGCACCGCTGCTGGATCACATAAACAAcgATGCTACTGAGAGCCCAAGATCTGATGGACAGACTCAagCTGCTGCTCCTGTGAGCCCAGAGACTCAAGATGTTGCTGACAGCGGCGCCTCTGATGAAGaTTCAGCTGCAGCAACTCAAGCACAAGATCCCGAGGACGATTCTGCTAAAAGTGACGACAACAGTGACGAGAAGTTGATCACTGACTCTGACTCTGAGACAGACTCTGACTCTGACTCTAAGACAGAGACTGACGATGACTCTGAGGAAGACTTACTAAAACCAGATGATAGCATCAGCAAAGATGATGACAGCCAGGAGGTGGAGGGGGATGACATAGGGAGTGATGAACAAGCAGATGAGAAGGAAGTGAAGGAAGAGGGAGATAACTCTGATGCTAAGACTGATTCTGAGGATGAGTCTAACGGTAagactgattctgattctgatgaagGGTCTGACACCAAGACTGATGCTAAGACTGATTCTGATGAAGGGTCTGACACCAAGACTGATGCTAAGACTGATTCTGATGAAGGGTCTGACACCAAGACTGATGCTAAGACTGATTCTGATGAAGGGTCTGATGCTAAGACTGATGCTAAGACTGATTCTGATGAAGGGTCTGATGCTGAGACTGATGCTAAGACTGATTTTGATGAAGGGTCTGATACTAAGACTGATGCTAAGACTGATTCTGATGAAGGGTCTGATGCTAAGACTGATGCTAAGACTGATTCTGATGAAGGGTCTGACACCAAGACTGATGCTAagactgattctgattctgacgaTGATTCTGATGAAGGGTCTGATACTAAGACTGATGCTAAGACTGATTCTGATGAAGGGTCTGATGCTAAGACTGATGCTAAGACTGATTCTGATGAAGGGTCTGACACTAAGACTGATGCTAAGACTGAGACTGATTCTGATGATGATTCTGATGAAGGATCTGACTCTCTGGTTGGTGATGATTCTGACGCTAAGACTGATTCTGACGATGATTCTGATGCTAAGACTGATTCTGGGGAAGTGTCTGACGCTAAGACAGGGTCTGACTCTCTGGTTGACGATGATTCTGACGCTAAGACAGGGTCTGACTCTCTGGTTGATGATGATTCTGATGCTAAGACAGGGTCTGACTCTCTGGTTGAAGATGATTCTGACGCTAAGATAGATTCTGACGATCAGACTGATGCTGAGGCTGACGTACTAAAACCAGATGATAGCATCAGCCAGGACACTAACAGCCAGATGGAGGGGGGCGAAGCAGGGAGTGAGGAACCAGCAGAGGTGGTAGGGGAAGATAAGGTAGAGGGAGGTGAAATTGATCCTATAATGTCAGATGATGACAGCATAAGCGATGACAAAGACGTTACTCTGAGTGACGAAGACAGTCAGACTAATGGTGAAAACGGCAAACCTGGGCCAGAGAACAAGGGCATCAATGACACACAAGACTCTGTGGAGGTGATTCAGGACAACTATGCAAACTCGGACACTGTGGAACCAAAGGAGCAGAGTCCAGAAACTCCCATCTCCACTAAAGAGCCATCTGTCGACCAACCAGACAAACCGGACAACTCCACCTCCACCACCGCAAAGGcTGTGAATTAGACGCCCAGCCTCTGAACTGTGGAAGCTCACCGACTGCAGAGTCGAGTCCGCAGTGGAACACAGTTGCAACATCTTGAACAAGCTAAACTGCAACTAAACTTCGACCTTAAGCTTCCTGGTTTCACCTCTGCTCCTTCCTGATTGGTTGTCTCCGCTTTCTTCAAACTCTGGCTTTGGTTTAGAAAAATCTGTCTTCCACCAATCAAATCTCTGTCTgtaatctgtctgtctgtctatctgtctgtctgtctgtctgtctgtctgcccatCTGTCcccctctctgcctgtctgtctgcccgtgtgtctctctgtctgcccaTCTGTCcccctctctgcctgtctgtctgcctgtctgtctgtctgcccgtCTGTcgctctgtctgcctgtctgtctgtccctctgtgtcACATTAAACCatctgttctgtttttgtgttcAGAAGAATTGCTAATAAAGTTTGAACTGTCAAAACTTCTCTCACTGC
>XM_039820325.1
gagagtttGAGAATAAAAAGCTGCTGCTCTGTTTGAGAGGAAATCAGAAACTCAGTTCTGTGAAATCTGTTTGCTGTCGACCTGAAGAACCAGAAAAATGCTCCAACGgtGTGTTTTGTTGCTGCTCGTTGCCATTGCAGCAGTTTCTCTCGCAGCTCCAGTCCCAGAGGGAACAACAGCTGACGATAGAAGTGCACCGCTGCTGGATCACATAAACAAcgATGCTACTGAGAGCCCAAGATCTGATGGACAGACTCAagCTGCTGCTCCTGTGAGCCCAGAGACTCAAGATGTTGCTGACAGCGGCGCCTCTGATGAAGaTTCAGCTGCAGCAACTCAAGCACAAGATCCCGAGGACGATTCTGCTAAAAGTGACGACAACAGTGACGAGAAGTTGATCACTGACTCTGACTCTGAGACAGACTCTGACTCTGACTCTAAGACAGAGACTGACGATGACTCTGAGGAAGACTTACTAAAACCAGATGATAGCATCAGCAAAGATGATGACAGCCAGGAGGTGGAGGGGGATGACATAGGGAGTGATGAACAAGCAGATGAGAAGGAAGTGAAGGAAGAGGGAGATAACTCTGATGCTAAGACTGATTCTGAGGATGAGTCTAACGGTAagactgattctgattctgatgaagGGTCTGACACCAAGACTGATGCTAAGACTGATTCTGATGAAGGGTCTGACACCAAGACTGATGCTAAGACTGATTCTGATGAAGGGTCTGATGCTAAGACTGATGCTAAGACTGATTCTGATGAAGGGTCTGATGCTGAGACTGATGCTAAGACTGATTTTGATGAAGGGTCTGATACTAAGACTGATGCTAAGACTGATTCTGATGAAGGGTCTGATGCTAAGACTGATGCTAAGACTGATTCTGATGAAGGGTCTGACACCAAGACTGATGCTAagactgattctgattctgacgaTGATTCTGATGAAGGGTCTGATACTAAGACTGATGCTAAGACTGATTCTGATGAAGGGTCTGATGCTAAGACTGATGCTAAGACTGATTCTGATGAAGGGTCTGACACTAAGACTGATGCTAAGACTGAGACTGATTCTGATGATGATTCTGATGAAGGATCTGACTCTCTGGTTGGTGATGATTCTGACGCTAAGACTGATTCTGACGATGATTCTGATGCTAAGACTGATTCTGGGGAAGTGTCTGACGCTAAGACAGGGTCTGACTCTCTGGTTGACGATGATTCTGACGCTAAGACAGGGTCTGACTCTCTGGTTGATGATGATTCTGATGCTAAGACAGGGTCTGACTCTCTGGTTGATGATGATTCTGATGCTAAGACAGGGTCTGACTCTCTGGTTGAAGATGATTCTGACGCTAAGATAGATTCTGACGATCAGACTGATGCTGAGGCTGACGTACTAAAACCAGATGATAGCATCAGCCAGGACACTAACAGCCAGATGGAGGGGGGCGAAGCAGGGAGTGAGGAACCAGCAGAGGTGGTAGGGGAAGATAAGGTAGAGGGAGGTGAAATTGATCCTATAATGTCAGATGATGACAGCATAAGCGATGACAAAGACGTTACTCTGAGTGACGAAGACAGTCAGACTAATGGTGAAAACGGCAAACCTGGGCCAGAGAACAAGGGCATCAATGACACACAAGACTCTGTGGAGGTGATTCAGGACAACTATGCAAACTCGGACACTGTGGAACCAAAGGAGCAGAGTCCAGAAACTCCCATCTCCACTAAAGAGCCATCTGTCGACCAACCAGACAAACCGGACAACTCCACCTCCACCACCGCAAAGGcTGTGAATTAGACGCCCAGCCTCTGAACTGTGGAAGCTCACCGACTGCAGAGTCGAGTCCGCAGTGGAACACAGTTGCAACATCTTGAACAAGCTAAACTGCAACTAAACTTCGACCTTAAGCTTCCTGGTTTCACCTCTGCTCCTTCCTGATTGGTTGTCTCCGCTTTCTTCAAACTCTGGCTTTGGTTTAGAAAAATCTGTCTTCCACCAATCAAATCTCTGTCTgtaatctgtctgtctgtctatctgtctgtctgtctgtctgtctgtctgcccatCTGTCcccctctctgcctgtctgtctgcccgtgtgtctctctgtctgcccaTCTGTCcccctctctgcctgtctgtctgcctgtctgtctgtctgcccgtCTGTcgctctgtctgcctgtctgtctgtccctctgtgtcACATTAAACCatctgttctgtttttgtgttcAGAAGAATTGCTAATAAAGTTTGAACTGTCAAAACTTCTCTCACTGC

Function

GO: NA

KEGG:

id description
ko00140 Steroid hormone biosynthesis
ko04913 Ovarian steroidogenesis
ko04927 Cortisol synthesis and secretion

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039820323.1 True 2347 mRNA 0.47 12 35197333 35214312
XM_039820324.1 False 2305 mRNA 0.47 13 35197333 35214312
XM_039820325.1 False 2305 mRNA 0.47 13 35197333 35214312

Neighbor

gene id symbol gene type direction distance location
si:ch211-133n4.6 NA coding upstream 19974 35161800 ~ 35177359 (+)
rfx5 rfx5 coding upstream 166796 35020790 ~ 35030537 (+)
psmb4 psmb4 coding upstream 177151 35013313 ~ 35020182 (+)
LOC120571430 NA coding upstream 232053 34964583 ~ 34965280 (+)
LOC120571414 NA coding upstream 238973 34951936 ~ 34958360 (+)
LOC120571418 NA coding downstream 103266 35317578 ~ 35327015 (+)
LOC120571423 fam63a coding downstream 118600 35332912 ~ 35336421 (+)
LOC120570960 LOC106675582 coding downstream 126760 35341072 ~ 35341767 (+)
LOC120571395 NA coding downstream 233462 35447774 ~ 35467170 (+)
LOC120571399 NA coding downstream 243235 35457547 ~ 35459609 (+)
G138652 NA non-coding upstream 48792 35147627 ~ 35148541 (+)
G138646 NA non-coding upstream 68180 35128905 ~ 35129153 (+)
G138599 NA non-coding upstream 165544 35031014 ~ 35031789 (+)
G138586 NA non-coding upstream 190935 34956883 ~ 35006398 (+)
LOC120571431 NA non-coding upstream 309360 34884295 ~ 34887973 (+)
G138764 NA non-coding downstream 70365 35284677 ~ 35285583 (+)
G138769 NA non-coding downstream 107613 35321925 ~ 35322254 (+)
G138670 NA non-coding downstream 112017 35326329 ~ 35389253 (+)
G138721 NA non-coding downstream 122821 35337133 ~ 35373572 (+)
G138770 NA non-coding downstream 125120 35339432 ~ 35349572 (+)
LOC120571788 LOC103147980,LOC106964283,LOC107396830,LOC103369207 other upstream 623956 34540077 ~ 34573377 (+)
LOC120571618 NA other upstream 1018787 34163590 ~ 34178546 (+)
LOC120572044 NA other upstream 1250370 33890732 ~ 33946963 (+)
LOC120572054 deptor other upstream 1324039 33861199 ~ 33873294 (+)
LOC120572071 NA other upstream 1419857 33774507 ~ 33777476 (+)
LOC120570959 NA other downstream 25983 35240295 ~ 35290255 (+)
mllt11 NA other downstream 84975 35299287 ~ 35316864 (+)
LOC120570961 NA other downstream 157655 35371967 ~ 35377206 (+)
mindy1 fam63a other downstream 164527 35378839 ~ 35444328 (+)
LOC120571398 NA other downstream 189124 35403436 ~ 35517319 (+)

Expression


Co-expression Network