LOC120571394


Basic Information

Item Value
gene id LOC120571394
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 34845652 ~ 34866518 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039820327.1
CTGTCCTCACTGTTCAGTGACCAACAGATCCCAGAGAGAGCAGAGGGTGCGTTTGATTTTTGTCTCAGAGCAGGATGAGTGTTGTGAAGAGAGCCGTGCTGCTGACGCTGCTGCTGGCGGCGATCGGCAGCTCCGCCGCAGCGGGCCCCGAAGACTGCCACGGTGTGAACGAAAAGCTGCAAACTAAAGACATTCACAAGATTTTCGGGGACTGGGTCCTGGTCTGGTCCGTCACTGACCACGACAAAGGCAACGCGCTGCTTCAAAACGTCACCAGCTCCCACGTCGAGTTAAGACTCCGCGATGACAAGAAGACGGTCATGTTCACAGAGAGGAACATCTACACACACCAGTCATGTGTCACCTACATCATCAACATGACGATGCCCACTGACCCACTGGACAGCACCATGACCACCTTTCCTGGTTccatGGAGAAGGACGAACTTCTTGAATTGTACAACGAGACAGCGACTGTGACTTTCTTCGAGACCTGCCCCGACTGTCTGTCGATGGTCTTCAAGGACAGCGAGGGACGATTCCTGCTCAACTACAggaaGGATGGGCATCACCTTAATGTTGAGAAGTTGAAAGCAGACCACAGCGATCACCACAAACTGGCCGCCTGTCTGGGATTCCCCGCCAACGCCAAGCCGTTCAACTACGACGGAGCTGCAGATTTCTGTCATAAGAAATCAACTGACTGCCAAGGTCTGGACGTAAAGCTGCAAACAGAAGACATTCACAAGATTTTCGGGGACTGGGTCCTGGTCTGGTCCGTCACTGATCACGAGAAAGGCAACGCGCTGCTTCCAAAAGTCACCAGCTCCCACGTCGAGTTCAAAATCCGCGATGACGAAAAGACGGTCATGTTCACAGAGAGGAACGCTTACACACACCAGCCGTGTGTCACCTACATCATCAACATGACGATGCCCACTGACCCGCTGGACAGCACCATGACCACCTTTCCTGGTTCCATGGAGAAGGACGGACTTCTTGAGGTGTACAATGAGACAGCATCTGTGACTTTCTTCGAGACCTGCCCCGACTGTCTGTCGATGGTCTTCAAGGACAGCGAAGGACGATTCCTGCTCAACTACAggagGGATGGGCATCACCTTAATGTTCATAAGTTGAAAGCAGACCACAGCGATCACCACAAACTGGCCGCCTGTCTGGGATTCCCCACCGACGCCAACCCGTTCAACTACGATGGAGCTGCAGATTTCTGTCATAAGAAATCAACTGACTGCCAAGGTCTGGACGTAAAGCTGCAAACAGAAGACAttcccaggaTTTTCGGGGAATGGGTCCTGGTCTGGTCCGTCACTGACCACGAAAAAGGCAACGCACTGCTTCCAAAAGTCACCAGCTCCCACGTCGAGTTCAGACTCCGCGATGACGAAAAGACGGTCATGTTCACAGAGAGGAACGCTTACACACACCAGGCCTGTGTCACCTACATCATCAACATGACGATGCCCACTGACCCGCTGGACAGCACCATGACCACCTTTCCTGGTTCCATGGAGAAGGACGGACTTCTTGAGGTGTACAACGAGACAGCGACTGTGAATTTCTTCGAGACCTGCCCCGACTGTCTGTCGATTGTCTTCAAGGACAGCGAGGGACGATTCCTGCTCAactacaggagGGAGGGGCATCACCAGGATGTTCATAAATTGAAAGCAGACCACACCAATCACCACAAACTGGCCGCCTGTCTGGGATTCCCCGGCAACGTCGACCCGTTCAACTACGACGGAGCTGCAGATTTCTGTCATAAGAAATCATCCCCGGAGGTGAAGCCAGAAGCGTCCTGAGTGAAGACGTTGGAGCAAAACAATCATATTTCAGATATGTCCTCCACCAATACAATAAAAGCAAATACTAAAACATG

Function

GO: NA

KEGG:

id description
ko04610 Complement and coagulation cascades

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039820327.1 True 1903 mRNA 0.52 16 34845652 34866518

Neighbor

gene id symbol gene type direction distance location
LOC120571416 NA coding upstream 2411 34837270 ~ 34843241 (+)
LOC120571417 NA coding upstream 11190 34818865 ~ 34834462 (+)
LOC120570956 NA coding upstream 30059 34809504 ~ 34815593 (+)
LOC120571426 NA coding upstream 53190 34718115 ~ 34792462 (+)
LOC120570955 NA coding upstream 161926 34674665 ~ 34683726 (+)
LOC120571415 NA coding downstream 34084 34900602 ~ 34904608 (+)
LOC120571407 NA coding downstream 41086 34907604 ~ 34921116 (+)
LOC120570957 NA coding downstream 79206 34945724 ~ 34951476 (+)
LOC120571414 NA coding downstream 85418 34951936 ~ 34958360 (+)
LOC120571430 NA coding downstream 98065 34964583 ~ 34965280 (+)
LOC120571427 NA non-coding upstream 21285 34820405 ~ 34824367 (+)
G138510 NA non-coding upstream 383713 34461681 ~ 34461939 (+)
G138477 NA non-coding upstream 391889 34445122 ~ 34453763 (+)
G138465 NA non-coding upstream 536121 34308579 ~ 34309531 (+)
G138456 NA non-coding upstream 638920 34206319 ~ 34206732 (+)
LOC120571431 NA non-coding downstream 17777 34884295 ~ 34887973 (+)
G138586 NA non-coding downstream 90365 34956883 ~ 35006398 (+)
G138599 NA non-coding downstream 164496 35031014 ~ 35031789 (+)
G138646 NA non-coding downstream 262387 35128905 ~ 35129153 (+)
G138652 NA non-coding downstream 281109 35147627 ~ 35148541 (+)
LOC120571788 LOC103147980,LOC106964283,LOC107396830,LOC103369207 other upstream 272275 34540077 ~ 34573377 (+)
LOC120571618 NA other upstream 667106 34163590 ~ 34178546 (+)
LOC120572044 NA other upstream 898689 33890732 ~ 33946963 (+)
LOC120572054 deptor other upstream 972358 33861199 ~ 33873294 (+)
LOC120572071 NA other upstream 1068176 33774507 ~ 33777476 (+)
LOC120570959 NA other downstream 373777 35240295 ~ 35290255 (+)
mllt11 NA other downstream 432769 35299287 ~ 35316864 (+)
LOC120570961 NA other downstream 505449 35371967 ~ 35377206 (+)
mindy1 fam63a other downstream 512321 35378839 ~ 35444328 (+)
LOC120571398 NA other downstream 536918 35403436 ~ 35517319 (+)

Expression


Co-expression Network