LOC120571395


Basic Information

Item Value
gene id LOC120571395
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 35447774 ~ 35467170 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039820328.1
TCATATTTCCTTGTTCCCTCCCCTTCACAGCTACAGTTTGCAGATGGGTGTAACCAACATGCTGGGGCAAGTACAACAGCGTATCACATGCTGTTATTACATCAGAGCTCAGACTCATTTCACTTCTCAGGAAGTGAGCCAcaagacagtcagacagtcgTTGTTACTGagcgagaggtgaaatggcgcagaatggagttcagctggaccgggaaaccttctcttgttccatctgtctggatctactgaaggatccggtggctattccctgtggacacagctactgcatgaactgtattaaaggCTTCTGGGATGAAAGGGATGAGAAGGAAATCTACAGCTGCCCTCAGTGCAGGCAGAGcttcacaccgaggcctgtcctgctgaaaaacaccatgttagcagctttagtggaggagctgaagaagactggactccaagctgctcctgctgatcactgctatgctggagctgaagatgtggcctgtgatttCTGCAACGGGAGAAAACTCAAAGCCATCAAATCCTGTCTGCAATGTCTGGCTTCTTTCTGTGAGAAACATCTTCAGCCTCATTTTGAATCAGAGACAttcaagaaacacaagctggtggagccgtccaagaagctccaggagaacgtctgctctCGTCACGATGAGGTAATGAAGATTTTCTGCcgtactgatcagcagcttatctgttatctctgcttaatGGACAAACATAAAGGCCACGATACAGTCTCGGCTGCAGAAGAAAGGACTGAGAGGCAGGAAAAGCTCGAGGGGAGTCGACAgaccatccagcagagaatccaggacagagagaaagatgtaaagctgcttcaacagcaggcggAGGCCATCGATCGCGCCGCcgataaagcagtggaggacagcgagaagatcttcaccgagctgatccgtctcctggagaaaagaagctctgatgtgaagcagcaggtcagatcccagcagaaaagggaagagagtcgagtcaaagagcttcaggagaagctggagcaggagatcactgagctgaagagggaagacgctgagctgaagaagctctcacacacagaggatcacagccagtttctacacaactacccctcactgtcaccactcagccaatcagcatccagcatccatatcagccctctgagctgctttgaggacgtgacagcggccgtgtcagaagtcagagataaactacaggaTGTCCTGAGAGAGGAGTGGACAACCgtctcactgacagggactgaagtggacgttttactgccacaaccagagcccaagaccagagctggattcttaaaatattcacgtgaaatcacactggatccaaatacagcaaacacacatctgttattatctgaggggaacaggaaagcaacatTCATGAGTCAACAACAGtcttattctagtcacccagacagattcactgGCTGGTCGTATCAGGTCCTGAGTAGCGtgagtctgactggacgttgttactgggaggtggagaggagaggagaagtttctgtagcagtcgcatacaagaatatcagcagagcagagGGGTCGGGTGAATGTTTATTTGGACaaaatgacaaatcttgggcATTGTATTGTGACAACAACAGTTATACATTTTGGTCCAACAAAGTCCAAACTCCCGTCTCAGGTcctgagtcctccagagtaggagtgtacctggatcacagtgcaggtattctgtccttctacagcgtctctgaaaccatgactctcctccacagagtccagaccacattcactcagcccctCTATGCTGGACTTTGGGTTTATTGGCCTCATGGAaactctgctgagttgtgtaaactgaaatagacagaagtcattttaagggttaaattctgtCATTCtgagtcatttatttatttaaaaaaaggaaaacttctctaaattgcagcttgttaaatgagaatattttctGGTTCCTTCACTCCTCGAggcttttttctgcattttgatgcttttttttaattttttgactCATTCAAGGCTTTTGTTGAtgctttttgatacattttcaatatttttttaacgGTAGTTTTTATTGAAAGCTTTTTGACGCTCGcttgctacaacacacacaca
>XM_039820329.1
TCATATTTCCTTGTTCCCTCCCCTTCACAGCTACAGTTTGCAGATGGGTGTAACCAACATGCTGGGGCAAGTACAACAGCGTATCACATGCTGTTATTACATCAGAGCTCAGACTCATTTCACTTCTCAGGAAGTGAGCCAcaagacagtcagacagtcgTTGTTACTGagcgagaggtgaaatggcgcagaatggagttcagctggaccgggaaaccttctcttgttccatctgtctggatctactgaaggatccggtggctattccctgtggacacagctactgcatgaactgtattaaaggCTTCTGGGATGAAAGGGATGAGAAGGAAATGTACAGCTGCCCTCAGTGCAGGCAGAGcttcacaccgaggcctgtactggtgaaaaacaccatgttagcagctttagtggaggagctgaagaagactggactccaagctgctcctgctgatcactgctatgctggagctgaagatgtggcctgtgatttCTGTACCGGGAGAAAACTCAAAGCCATCAAATCCTGCCTGTTGTGTCTGATCTCTTATTGTGAGAAACACCTTCAGCCTCATTACGATGTAGCTCAgttaaagaaacacaagctggtggagccgtccaagaagctccaggagaacgtctgctctCGTCACGATGAGGTAATGAAGATTTTCTGCcgtactgatcagcagcttatctgttctctctgctctgtggaCGAACATAAAGGTCACGACAAaatctcagctgcagcagaaaggactgagaggcagaaaaagcTCGAGGGGAGTCGACAGACCATCCAacagagaatccaggacagagagaaagatgtgaagctgcttcaacagcaggcggAGGCCATCGATCGCGCCGCcgataaagcagtggaggacagcgagaagatcttcaccgagctgatccgtctcctggagaaaagaagccctgatgtgaagcagcaggtcagatcccagcagaaaagtgaagtgagtcgagtcaaagagcttcaggagaagctggagcaggagatcactgagctgaagagggaagacgctgagctgaagaagctctcacacacagaggatcacaaccagtttctacacaactacccctcactgtcaccactcagccaatcaacatccagcatccatatctgtcctctgagctgctttgaggacgtgacagcgaccgtgtcagaagtcagagataaaATACAGGACGTCCTGAGAGAGGAGTGGACAAATGTCTCAATGAcagagcccaagaccagagctggattcttaaaatattcacgtgaaatcacactggatccaaacacagtaaacacacagctgTCATTATCTGAAGGCAACAGGAAAGCAACATTAATGAGTCAACAACAGTCTTATTCTggtcacccagacagattcactaACATGTggcaggtcctgagtagagagggtctgactggacgttgttactgggaggtggagaggagaggaggaggagtttatgtagcagtcgcatacaagaatatcagcagagcaggggggTCAGAGGAATGTGGATTTGGACaaaatgacaaatcttgggcATTAGATTGTATcaacaacaaatatacattttggtccaacaaagtccaaactcccgtctcaggtcctgagtcctccagagtaggagtgtacctggatcacagtgcaggtattctgtccctctacagcgtctctgaaaccatgactctcctccacagagtccagaccacattcactcagcccctCTATGCTGGACTTTGGGTTTATTGGCCTCATGGAaactctgctgagttgtgtaaactgaaatagacagaagtcattttaagggttaaattctgtCATTCtgagtcatttatttatttaaaaaaaggaaaacttctctaaattgcagcttgttaaatgagaatattttctGGTTCCTTCACTCCTCGAggcttttttctgcattttgatgcttttttttaattttttgactCATTCAAGGCTTTTGTTGAtgctttttgatacattttcaatatttttttaacgGTAGTTTTTATTGAAAGCTTTTTGACGCTCGcttgctacaacacacacacatg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039820328.1 True 2123 mRNA 0.47 2 35447774 35467168
XM_039820329.1 False 2092 mRNA 0.46 2 35447774 35467170

Neighbor

gene id symbol gene type direction distance location
LOC120570960 LOC106675582 coding upstream 106007 35341072 ~ 35341767 (+)
LOC120571423 fam63a coding upstream 111353 35332912 ~ 35336421 (+)
LOC120571418 NA coding upstream 120759 35317578 ~ 35327015 (+)
LOC120571393 NA coding upstream 233462 35197333 ~ 35214312 (+)
si:ch211-133n4.6 NA coding upstream 270415 35161800 ~ 35177359 (+)
LOC120571424 LOC106633724 coding downstream 47951 35515121 ~ 35515782 (+)
LOC120570967 LOC106675582 coding downstream 486685 35953855 ~ 35955159 (+)
LOC120571435 NA coding downstream 489247 35956417 ~ 35958468 (+)
riok1 riok1 coding downstream 512723 35979893 ~ 36004234 (+)
LOC120570972 NA coding downstream 681351 36148521 ~ 36153226 (+)
G138670 NA non-coding upstream 58521 35326329 ~ 35389253 (+)
G138721 NA non-coding upstream 74202 35337133 ~ 35373572 (+)
G138772 NA non-coding upstream 91296 35347032 ~ 35356478 (+)
G138770 NA non-coding upstream 98202 35339432 ~ 35349572 (+)
G138769 NA non-coding upstream 125520 35321925 ~ 35322254 (+)
G138715 NA non-coding downstream 16240 35483410 ~ 35527783 (+)
G138781 NA non-coding downstream 21437 35488607 ~ 35490914 (+)
G138748 LOC106676976 non-coding downstream 83599 35550769 ~ 36011779 (+)
G138719 NA non-coding downstream 91543 35558713 ~ 35566787 (+)
G138725 NA non-coding downstream 149490 35616660 ~ 35704687 (+)
mindy1 fam63a other upstream 3446 35378839 ~ 35444328 (+)
LOC120570961 NA other upstream 70568 35371967 ~ 35377206 (+)
mllt11 NA other upstream 130910 35299287 ~ 35316864 (+)
LOC120570959 NA other upstream 157519 35240295 ~ 35290255 (+)
LOC120571788 LOC103147980,LOC106964283,LOC107396830,LOC103369207 other upstream 874397 34540077 ~ 34573377 (+)
LOC120570962 LOC106676000,LOC106675582 other downstream 29707 35496877 ~ 35551155 (+)
LOC120570963 fam63a,LOC107589430 other downstream 51746 35518916 ~ 35614565 (+)
G138806 NA other downstream 239730 35706900 ~ 35724402 (+)
LOC120571439 LOC106675582 other downstream 336134 35803304 ~ 35818966 (+)
LOC120571445 LOC106675582,LOC106676976 other downstream 542817 36009987 ~ 36104537 (+)

Expression


Co-expression Network