LOC120571417


Basic Information

Item Value
gene id LOC120571417
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 34818865 ~ 34834462 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039820356.1
gtgttttattgtgtagCTTTCACACGGTATAGCATCATGAATCTGTGGCTCAGCGCTCACTTCCTGGTAGCGGGGCTGTTCCTGAGCTGCTCGGCTCTCACGAGCGAAGAATGCCAACCCTTGGTCACGCCTCTGTCCCTGGTCGACCCCTCCATGatgTACGGAAGGTCGAACTTCCTTGTGGGTTACGTTGACCGTGACATCTATAGAGGCATCCTGAAGACGACTGAGAGCTCCTGGATGAATTTTACCGCGTCACCAAGCGCCAATGAGGTGGTTATGTCTCAGACAAACAAGATGAATGAAACCTGCTTGGCCTCATCTGTCAAGGTAACCATTGACGGCAACACCGCAACTACGTCAATCGCCAACACCACCTCTGTGTTCCACTTCCTGCCGAGCTGCGACGGCTGTCTGGTCATGAGCATCAACGCCACCGTCAGAGACCTCGACAAGTTCGCTACCATGTTGAAACTCAACGTGGATGTTTCGGGGGAAGAGGTCAACGTCCGTGCTCTTTATCTGTTAGgcAGAGAGGCGACCCTGAAGGACTCGGACCTGGAACGTTTCAAGCAGCAGGCAAGCTGCCTCGGCTTCTCCGGAGAGCCAGACTTCCTCTATGACCCCAAAAAAGGTTTCTGTGCTGAAGGTGAAGGCATAAAGTTGGAACTTTGAAGTTAACAACAACTTTGGTGAATATTTCAAACTGTAACTGAGAAAGTTATAGAGACAAAAGGTGACTCATCAAAAGTGGGGTCCGTATTTTGTATTCACGATCTAATAAAATGGTGTAGCACCAAGGTTttcaa
>XM_039820357.1
acttttgtgttttattgtgtagCTTTCACACGGTATAGCATCATGAATCTGTGGCTCAGCGCTCACTTCCTGGTAGCGGGGCTGTTCCTGAGCTGCTCGGCTCTCACGAGCGAAGAATGCCAACCCTTGGTCACGCCTCTGTCCCTGGTCGACCCCTCCATGatgTACGGAAGGTCGAACTTCCTTGTGGGTTACGTTGACCGTGACATCTATAGAGGCATCCTGAAGACGACTGAGAGCTCCTGGATGAATTTTACCGCGTCACCAAGCGCCAATGAGGTGGTTATGTCTCAGACAAACAAGATTCGCCAACACCACCTCTGTGTTCCACTTCCTGCCGAGCTGCGACGGCTGTCTGGTCATGAGCATCAACGCCACCGTCAGAGACCTCGACAAGTTCGCTACCATGTTGAAACTCAACGTGGATGTTTCGGGGGAAGAGGTCAACGTCCGTGCTCTTTATCTGTTAGgcAGAGAGGCGACCCTGAAGGACTCGGACCTGGAACGTTTCAAGCAGCAGGCAAGCTGCCTCGGCTTCTCCGGAGAGCCAGACTTCCTCTATGACCCCAAAAAAGGTTTCTGTGCTGAAGGTGAAGGCATAAAGTTGGAACTTTGAAGTTAACAACAACTTTGGTGAATATTTCAAACTGTAACTGAGAAAGTTATAGAGACAAAAGGTGACTCATCAAAAGTGGGGTCCGTATTTTGTATTCACGATCTAATAAAATGGTGTAGCACCAAGGTTttcaagc

Function

GO:

id name namespace
GO:0005507 copper ion binding molecular_function

KEGG:

id description
ko04141 Protein processing in endoplasmic reticulum
ko04610 Complement and coagulation cascades
ko05020 Prion disease

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039820356.1 True 809 mRNA 0.50 6 34818871 34834460
XM_039820357.1 False 752 mRNA 0.50 5 34818865 34834462

Neighbor

gene id symbol gene type direction distance location
LOC120570956 NA coding upstream 3272 34809504 ~ 34815593 (+)
LOC120571426 NA coding upstream 26403 34718115 ~ 34792462 (+)
LOC120570955 NA coding upstream 135139 34674665 ~ 34683726 (+)
LOC120571392 NA coding upstream 169579 34642831 ~ 34649286 (+)
LOC120571600 NA coding upstream 180571 34630044 ~ 34638294 (+)
LOC120571416 NA coding downstream 2808 34837270 ~ 34843241 (+)
LOC120571394 NA coding downstream 11190 34845652 ~ 34866518 (+)
LOC120571415 NA coding downstream 66140 34900602 ~ 34904608 (+)
LOC120571407 NA coding downstream 73142 34907604 ~ 34921116 (+)
LOC120570957 NA coding downstream 111262 34945724 ~ 34951476 (+)
G138510 NA non-coding upstream 356926 34461681 ~ 34461939 (+)
G138477 NA non-coding upstream 365102 34445122 ~ 34453763 (+)
G138465 NA non-coding upstream 509334 34308579 ~ 34309531 (+)
G138456 NA non-coding upstream 612133 34206319 ~ 34206732 (+)
G138454 NA non-coding upstream 615130 34202931 ~ 34203735 (+)
LOC120571431 NA non-coding downstream 49833 34884295 ~ 34887973 (+)
G138586 NA non-coding downstream 122421 34956883 ~ 35006398 (+)
G138599 NA non-coding downstream 196552 35031014 ~ 35031789 (+)
G138646 NA non-coding downstream 294443 35128905 ~ 35129153 (+)
G138652 NA non-coding downstream 313165 35147627 ~ 35148541 (+)
LOC120571788 LOC103147980,LOC106964283,LOC107396830,LOC103369207 other upstream 245488 34540077 ~ 34573377 (+)
LOC120571618 NA other upstream 640319 34163590 ~ 34178546 (+)
LOC120572044 NA other upstream 871902 33890732 ~ 33946963 (+)
LOC120572054 deptor other upstream 945571 33861199 ~ 33873294 (+)
LOC120572071 NA other upstream 1041389 33774507 ~ 33777476 (+)
LOC120570959 NA other downstream 405833 35240295 ~ 35290255 (+)
mllt11 NA other downstream 464825 35299287 ~ 35316864 (+)
LOC120570961 NA other downstream 537505 35371967 ~ 35377206 (+)
mindy1 fam63a other downstream 544377 35378839 ~ 35444328 (+)
LOC120571398 NA other downstream 568974 35403436 ~ 35517319 (+)

Expression


Co-expression Network