si:ch211-133n4.6


Basic Information

Item Value
gene id si:ch211-133n4.6
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 35161800 ~ 35177359 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039820361.1
AAGGTTTCTGCAGAGTTGCACTCACCTGCCGAACGGATCCAGGGCCCAATCAGAACGCATCATGCTCACCAGgaACGTTGTTCTTCTGTTCTCGCTGTTCGTCCTGCTGGTGATGGGAGACCTCGACTCCAACGATGCTGGAATACAAGCCATGTCAACAGATAAAGACTCCACGTCTGATGAAGCCCCCACAGAGAGCATGAACGCAGTCTCGCCTGATCAGCCTGATGAGTCCCAGTATTACGGAGGAGGACCTGCAGATATGAGCAGCTCCAGTTCAGAGACTGCAGACGCTCAATCAGCCAATCAGGTGACAGCACCCGAACCTGTAGCTGCTGCAAAGAgtgaagaggaagaagatgAAGATGAGACCTCTGACTCTGAAGAAGAAGGGAAGAACAAGTTCAACTCTCGTTCCGCCAAACCTCAGAGCCCCGTCCTCCCCCAGCAAAGCCCCGTCCTCCCTCAGCTAAGCACTGGCCACATTATAATAAGCCCCGCCCATGCCCTCCCCCCTCAGCCAATCATTCCTCAGCCCAAAGCTCTGGTGAGAAACAGGATGTCCAAGAGACGATCCCGAACCAACCGCCGCCAGatataaacatatacatttaGACTCACggagacacaaacatacatatacatatatatatatttactccaTTAAACATTTAGACTCATGGAGCCACAATGgcagactcacacacatgcacacagacacacaacggcggactcacacatgcacacagagacacaacggcagac
>XM_039820362.1
AAGGTTTCTGCAGAGTTGCACTCACCTGCCGAACGGATCCAGGGCCCAATCAGAACGCATCATGCTCACCAGgaACGTTGTTCTTCTGTTCTCGCTGTTCGTCCTGCTGGTGATGGGAGACCTCGACTCCAACGATGCTGGAATACAAGCCATGTCAACAGATAAAGACTCCACGTCTGATGAAGCCCCCACAGAGAGCATGAACGCAGTCTCGCCTGATCAGCCTGATGAGTCCCAGTATTACGGAGGAGGACCTGCAGATATGAGCAGCTCCAGTTCAGAGACTGCAGACGCTCAATCAGCCAATCAGGTGACAGCACCCGAACCTGTAGCTGCTGCAAAGAgtgaagaggaagaagatgATGAGACCTCTGACTCTGAAGAAGAAGGGAAGAACAAGTTCAACTCTCGTTCCGCCAAACCTCAGAGCCCCGTCCTCCCCCAGCAAAGCCCCGTCCTCCCTCAGCTAAGCACTGGCCACATTATAATAAGCCCCGCCCATGCCCTCCCCCCTCAGCCAATCATTCCTCAGCCCAAAGCTCTGGTGAGAAACAGGATGTCCAAGAGACGATCCCGAACCAACCGCCGCCAGatataaacatatacatttaGACTCACggagacacaaacatacatatacatatatatatatttactccaTTAAACATTTAGACTCATGGAGCCACAATGgcagactcacacacatgcacacagacacacaacggcggactcacacatgcacacagagacacaacggcagac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039820361.1 True 765 mRNA 0.51 10 35161800 35177359
XM_039820362.1 False 762 mRNA 0.51 10 35161800 35177359

Neighbor

gene id symbol gene type direction distance location
rfx5 rfx5 coding upstream 131263 35020790 ~ 35030537 (+)
psmb4 psmb4 coding upstream 141618 35013313 ~ 35020182 (+)
LOC120571430 NA coding upstream 196520 34964583 ~ 34965280 (+)
LOC120571414 NA coding upstream 203440 34951936 ~ 34958360 (+)
LOC120570957 NA coding upstream 210324 34945724 ~ 34951476 (+)
LOC120571393 NA coding downstream 19974 35197333 ~ 35214312 (+)
LOC120571418 NA coding downstream 140219 35317578 ~ 35327015 (+)
LOC120571423 fam63a coding downstream 155553 35332912 ~ 35336421 (+)
LOC120570960 LOC106675582 coding downstream 163713 35341072 ~ 35341767 (+)
LOC120571395 NA coding downstream 270415 35447774 ~ 35467170 (+)
G138652 NA non-coding upstream 13259 35147627 ~ 35148541 (+)
G138646 NA non-coding upstream 32647 35128905 ~ 35129153 (+)
G138599 NA non-coding upstream 130011 35031014 ~ 35031789 (+)
G138586 NA non-coding upstream 155402 34956883 ~ 35006398 (+)
LOC120571431 NA non-coding upstream 273827 34884295 ~ 34887973 (+)
G138764 NA non-coding downstream 107318 35284677 ~ 35285583 (+)
G138769 NA non-coding downstream 144566 35321925 ~ 35322254 (+)
G138670 NA non-coding downstream 148970 35326329 ~ 35389253 (+)
G138721 NA non-coding downstream 159774 35337133 ~ 35373572 (+)
G138770 NA non-coding downstream 162073 35339432 ~ 35349572 (+)
LOC120571788 LOC103147980,LOC106964283,LOC107396830,LOC103369207 other upstream 588423 34540077 ~ 34573377 (+)
LOC120571618 NA other upstream 983254 34163590 ~ 34178546 (+)
LOC120572044 NA other upstream 1214837 33890732 ~ 33946963 (+)
LOC120572054 deptor other upstream 1288506 33861199 ~ 33873294 (+)
LOC120572071 NA other upstream 1384324 33774507 ~ 33777476 (+)
LOC120570959 NA other downstream 62936 35240295 ~ 35290255 (+)
mllt11 NA other downstream 121928 35299287 ~ 35316864 (+)
LOC120570961 NA other downstream 194608 35371967 ~ 35377206 (+)
mindy1 fam63a other downstream 201480 35378839 ~ 35444328 (+)
LOC120571398 NA other downstream 226077 35403436 ~ 35517319 (+)

Expression


Co-expression Network