LOC120571423 (fam63a)


Basic Information

Item Value
gene id LOC120571423
gene name fam63a
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 35332912 ~ 35336421 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039820367.1
CTCCTATCACGGTCTGTGTGAACTCAACACGACGGCCAAGGAGGGAGAGATCTCTGTGTTCTTCAGAAACAACCACTTCAGTACCATGATCAAACACAagGGCCACCTGTACCTGCTGGTGACCGACCAGGGCTTCCTGCAGGAGGACAGTCTGGTCTGGGAGTCTCTTCACAACGTCGAGGGAGACGGGAACTTCTGCGACTCCGACTTCAGGCTGTGTCATCCTCCGCAGAGAGCGCCGCCGAACGCCACCAGCCTGGCGCCCAGCGCCCAGGACCAGCAGAGACAGATCGACCAGGACTACCTGGTGGCGGTgtccctgcagcagcagcagggcggGGCCCCGGGGCCCCTCAGTGACCTGGAGTTGGCCCGACAGCTCCAACAGGAAGAAtaccagcaacagcagcagcaactacagcagcaacagcaacagcaaccaCAGCAACAACAGGGATCGCCTGCTGCAGCAACGCAGgtcagaggtcaggggtCACAGCAGGGCGCAGCACGCAGAAGAGAGAAGGACTCGGACTGTGTCGTCCTATAGActccttttattattattgtaatctattgagacgcacacacacacacacacacacacacac

Function

NR:

description
PREDICTED: ubiquitin carboxyl-terminal hydrolase MINDY-1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039820367.1 True 611 mRNA 0.58 4 35332912 35336421

Neighbor

gene id symbol gene type direction distance location
LOC120571418 NA coding upstream 5897 35317578 ~ 35327015 (+)
LOC120571393 NA coding upstream 118600 35197333 ~ 35214312 (+)
si:ch211-133n4.6 NA coding upstream 155553 35161800 ~ 35177359 (+)
rfx5 rfx5 coding upstream 302375 35020790 ~ 35030537 (+)
psmb4 psmb4 coding upstream 312730 35013313 ~ 35020182 (+)
LOC120570960 LOC106675582 coding downstream 4651 35341072 ~ 35341767 (+)
LOC120571395 NA coding downstream 111353 35447774 ~ 35467170 (+)
LOC120571399 NA coding downstream 121126 35457547 ~ 35459609 (+)
LOC120571424 LOC106633724 coding downstream 178700 35515121 ~ 35515782 (+)
LOC120570967 LOC106675582 coding downstream 617434 35953855 ~ 35955159 (+)
G138769 NA non-coding upstream 10658 35321925 ~ 35322254 (+)
G138764 NA non-coding upstream 47329 35284677 ~ 35285583 (+)
G138652 NA non-coding upstream 184371 35147627 ~ 35148541 (+)
G138646 NA non-coding upstream 203759 35128905 ~ 35129153 (+)
G138599 NA non-coding upstream 301123 35031014 ~ 35031789 (+)
G138721 NA non-coding downstream 712 35337133 ~ 35373572 (+)
G138770 NA non-coding downstream 3011 35339432 ~ 35349572 (+)
G138772 NA non-coding downstream 10611 35347032 ~ 35356478 (+)
G138776 NA non-coding downstream 55019 35391440 ~ 35816515 (+)
G138666 NA non-coding downstream 55665 35392086 ~ 35541529 (+)
mllt11 NA other upstream 16048 35299287 ~ 35316864 (+)
LOC120570959 NA other upstream 42657 35240295 ~ 35290255 (+)
LOC120571788 LOC103147980,LOC106964283,LOC107396830,LOC103369207 other upstream 759535 34540077 ~ 34573377 (+)
LOC120571618 NA other upstream 1154366 34163590 ~ 34178546 (+)
LOC120572044 NA other upstream 1385949 33890732 ~ 33946963 (+)
LOC120570961 NA other downstream 35546 35371967 ~ 35377206 (+)
mindy1 fam63a other downstream 42418 35378839 ~ 35444328 (+)
LOC120571398 NA other downstream 67015 35403436 ~ 35517319 (+)
G138692 LOC106676976,LOC106675582 other downstream 102870 35439291 ~ 35497618 (+)
LOC120571400 LOC106675582,LOC106676976,LOC106675585,LOC101480093 other downstream 102926 35439347 ~ 35516617 (+)

Expression


Co-expression Network