LOC120571426


Basic Information

Item Value
gene id LOC120571426
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 34718115 ~ 34792462 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039820370.1
GCCTGCCGGCGCCAGCCACCATCCTCCTCACAGTTGTTGTTCGAaggcagagaggagagacaaggCGCGGCGCAGCGAGCAGAGTGGAAGACgcttttctctctcgctctctctccctccctctctctctctctctctcgccaaaataaaacccaacgaaataaaagaaaagacgGCTGGCTACTCCCCGTTTCTGCGTTGCAACCTGCGGAGAGGAAACGACAGGATGAGAGGATGATGACAACTTGTTCGCCCAGGAACTCGGCCGTGTTGAAGTGAAGGCGCGCTGACCCCCGACGCCGCCAACGAGACGGACGCCGCCGCTAAAGGGCGTCTCCTCTCAAACTCCGACCGTCTCCTCCGACAAAGACGAAGCTTTCCTGTCGACGCTCTCTCATCGGACAGACGGAAAGGATCGGCTCAACCGCCGGGCCGTCTTTCGTCTGACGGCATCTCCTCTCAAACTCCGACAAAGACGAAGCCGTCCTGTCGACGCGCTCTCattggacagacagagagaatcGGCCGAGCCACCCGGCCATCTTTCTTCTGACGGAGCAACGGAGGTCTAAACCGACCGTCCCGACATGGCTGACGACCTCTACAGCAGCACCTTCTCTGCTTCTGAATCGGACTTCTCTTCCTCGTCTTCGCCACTGTCCTCCGCCACGGCGTCCGCTTCCTTCCTCACGCTGGAGCAGAGGGCGGCTTTCATCTTCGTCCTCATCCTCTTCATCTTCCTGGGCTTGCTGATCGTGCGCTGTTTCCGGATCCTCCTGGACCCGTACCGCAGCATGCCATCCTCCACCTGGACCGACTACATGGAGAAGGACACCTTTGACTACCGCATTTCCTGACAGGCGGCCTGAGaggcagctaaccctaaccacCAACAAACTAAACTGAGGCGACGATCACACTGAGAGAGTAAAGCAGAGACACAAGCGCACGTTTCCCCTCCAACGGTTTACGTAGAAACCGAAAAGTTAGGAATTCTTTGGCAGATAGTCTGTCTACCCGAGTAGCTACTTGAAGGTTACGTAGAAACTTAAAATTATGGGTTCTTTGGCAGAAACATGTCTTACCGAGTAGCTACTTTAACGTTACGTACAAACCTGAAGTTTAGGGATCTTTGGaagatcaatcaatcaaaatttatttatatagcacttgacaacaaccagcaggtatccaaagtgcttaacatcagaaacacatgtcatacaatagaaacaatgaacatagaaaacagtaaaatcagaaaaggttacaaagaaacaaaagaatgaaattgtcacaccactgctgCGTATTAAAGGCCAGACGTAACAGATAAGTTTTGAGTTTGAacctaaaaagagctacatctgtaaTGTGCGAATATcggggggtaacttgttccagagtctcggggcaacAACTGCAAAGTTTGTCTACCAGAGTATCTACTTTACTTTAATGTTACTTACCCTCGAACGGTTATGATGgtgacaaagagacagaaacgTTAGTCTGAAACATCGACACACCAACCCAATTAtcagccgtcggacagtctggcgaggtcggtgactcgagtctgttcggtgtgtgttctgtgccgtcgtccttcatttgggccgatttgacttgttgaattggccagtgggcagtcggactcaattaccaatctgattggtggagcgctagCCCTGAAATGACGAGCAGGAAGAGCGggacgaacgcctctcaaaatctgacgaaaatctgtTGACCTTGGTCGATCTGAagtgaagacagattcagcaactgcatcacggcctatttctcgcttaaaatgttttcagaaacacgtt

Function

GO: NA

KEGG:

id description
ko04020 Calcium signaling pathway

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039820370.1 True 1835 mRNA 0.50 4 34718115 34792462

Neighbor

gene id symbol gene type direction distance location
LOC120570955 NA coding upstream 34389 34674665 ~ 34683726 (+)
LOC120571392 NA coding upstream 68829 34642831 ~ 34649286 (+)
LOC120571600 NA coding upstream 79821 34630044 ~ 34638294 (+)
LOC120571789 NA coding upstream 109386 34602707 ~ 34608729 (+)
LOC120571785 NA coding upstream 129001 34578457 ~ 34589114 (+)
LOC120570956 NA coding downstream 17042 34809504 ~ 34815593 (+)
LOC120571417 NA coding downstream 26403 34818865 ~ 34834462 (+)
LOC120571416 NA coding downstream 44808 34837270 ~ 34843241 (+)
LOC120571394 NA coding downstream 53190 34845652 ~ 34866518 (+)
LOC120571415 NA coding downstream 108140 34900602 ~ 34904608 (+)
G138510 NA non-coding upstream 256176 34461681 ~ 34461939 (+)
G138477 NA non-coding upstream 264352 34445122 ~ 34453763 (+)
G138465 NA non-coding upstream 408584 34308579 ~ 34309531 (+)
G138456 NA non-coding upstream 511383 34206319 ~ 34206732 (+)
G138454 NA non-coding upstream 514380 34202931 ~ 34203735 (+)
LOC120571427 NA non-coding downstream 27943 34820405 ~ 34824367 (+)
LOC120571431 NA non-coding downstream 91833 34884295 ~ 34887973 (+)
G138586 NA non-coding downstream 164421 34956883 ~ 35006398 (+)
G138599 NA non-coding downstream 238552 35031014 ~ 35031789 (+)
G138646 NA non-coding downstream 336443 35128905 ~ 35129153 (+)
LOC120571788 LOC103147980,LOC106964283,LOC107396830,LOC103369207 other upstream 144738 34540077 ~ 34573377 (+)
LOC120571618 NA other upstream 539569 34163590 ~ 34178546 (+)
LOC120572044 NA other upstream 771152 33890732 ~ 33946963 (+)
LOC120572054 deptor other upstream 844821 33861199 ~ 33873294 (+)
LOC120572071 NA other upstream 940639 33774507 ~ 33777476 (+)
LOC120570959 NA other downstream 447833 35240295 ~ 35290255 (+)
mllt11 NA other downstream 506825 35299287 ~ 35316864 (+)
LOC120570961 NA other downstream 579505 35371967 ~ 35377206 (+)
mindy1 fam63a other downstream 586377 35378839 ~ 35444328 (+)
LOC120571398 NA other downstream 610974 35403436 ~ 35517319 (+)

Expression


Co-expression Network