c13h6orf62 (clg22h6orf62,LOC108240366,LOC102228185,LOC101464686,LOC104924567,LOC107087843,LOC103135136,LOC106515831,LOC104947055)


Basic Information

Item Value
gene id c13h6orf62
gene name clg22h6orf62,LOC108240366,LOC102228185,LOC101464686,LOC104924567,LOC107087843,LOC103135136,LOC106515831,LOC104947055
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 18191093 ~ 18194027 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039820417.1
TGTTGATTTCAGTAACATTCTCAGAAGAAAAGTTAGTCACATTTGAGTTGCTCTTTAATTTAAATCTCTGTTGTAAACCCATGTCGATGGCAGGTTGAAAAAAGCTCATTTGGCTTAAATGTCATGTCTTAAAACATGGATTCCTGAACAAGTAATAAGGAGATGTAGTCTTAGCTTGTTGACCATTCCCCTCCTCAACGCTGCCCttttacacaaattaaaaatgACGTAGTTTTGTTTCCGATTTGTTGACCTTCTCAGTTGGTAGTTAGGGGGTATTTTACAGATCTAGTTTTTGAGTCGTTTGATGCGTTGTTTCTGCAAAGGGTAGCTAGCTCCATCCTTTATCCAACGTATAAATACAAAAGTAGAGTGTAGCCAAAATATTCTGTACAAGAAGACCCTACCATCAAAATCTAACCATGGGGGACCCAACTTCACGAAGAAATCAAACAAGAAATCGACTACGAGCTCAACTTCGGAAGAAAAGGGAATCTTTGGCTGATCAGTTTGACTTCAAGATTTATATAGCCTTCGTTTTCAAAGAAAAGaaGAAGAAGTCTGCACTTTTTGAGGTAGCTGAAGTGGTGCCAGTGATGACCAACAACTATGAAGAAAACATCCTACGAGGTGTGCGAGATTCCAGCTACTCTCTCGAGAGTTCGATAGAACTCCTGCAAAAAGATGTTGTGCAACTGCACGCCCCCAGATATCAGTCAATGCGAAGGGATGTGATAGGCTGCACACAGGAGATGGACTTCATCCTTTGGCCACGCAACGATATTGAGAagattgtctgtctgctgttctCCAGATGGAAGGGGGCTGAAGATGAACCCTTTAGGCCTGTTCAGGCcaagtttgaatttcatcatgGAGACTACGAGAAGCAGTGCTTGCATGCTTTGGGTCGTAAAGACAAGGCTGGAATGGTCATGAACAACCCAACGCAGTCTGTATTTCTCTTCATGGATAGACAGCACTTACAGACTCCTAAAACCAAGGCCACAGTGTTCAAGTTGTGCAGCCTCTGCCTTTACTTGCCCCAGGACCAGCTGACCTGCTGGGGTGTGGGAGACATCGAGGATCACCTCCGCCCATACATGCCTGATTAAGGCTCCCTGCAACACCCAGCCACATAGGGAAAagtcctccccctctctccagcCTAAGCCTTCAGAAGCAAATTGATGTACTCATCTCCACCCGTTTCCTTTTAAAAGATTTGAACTTGTGCTTGGATCTCTCCTTTTTTGTTACCTACTCAGTCTCCCCTCCCTGACCTGAAGCTGATTTAGTTCCcatccttgttttttttccctcacgctcccaatgttccttctcttctctcttccatTTTTGGAGTGGTTCCCCCATTTCTTTTGTTACTCCCTCTTCATTCCCTCCTACTCACTCATCCATTTTTGTTCATTTGAACCTGCACGAACATTGATTTTGAGTGGTTGGTTGTTCTCTTGGAGCCGCACTGTCAACAGCACCGGTCATTGAAGGAACTCTTTATGTTGCATCAAAACAGGAACAAACAATACACAGGTCTTCACGGTGGTTCTCAGATGGACATGTTTTATATCCTTGTTGTCATAAGAAAGGATTGCTAAAGCTTGTTTGTAATGGCAATGGGGTTTCTAGAACTTTACACAATCTTTTGACCAAGGATAGGTGTGAATAGGTGTTATAAAACCTGTATAAGTAAAGAAAACAAGATGAACAATATTTGTCAAATCATATGGTGTAGGTATTGCTTCTTAAAAACCGCCTTAGTTTTTTTGCtggactttgaaaaaaaaaattgttgctgTCATTTGCTTTCCTCTGAAACATGCTAGGCAGGCCTTTGCTAAAATCTTGAGTGACTTGAAAGGCATTGTACACAAAGTTGAGACATGTTGGTTAGATGTTGAAGGTCATTGTCACCATTCATGCTCCATTTGTTTAAGCTActgaaatctgatgttttatgttttgttttatttgggaTGTGGGTTGCTGATAAACTGAAATGGTGACATACTTAATGTTAAACTTGCCTAACAAAAGTTGCTGAAAGATAACTGATTTGTTTAATTTGACCTACTAAAATGAAGATAATTTGCTTCCATGCTCATCAAATTAAAATTGGGTTTTGCAGGCTTGCTTGTCAAAGAATATGAAGTACATGGCATATAATTTTGCTCCTTGTTGATTCAGTGTGTTCAGTTAAAAGGGTATAAGGTGTGTAACTTctggttttttttctgttgaatCTCAAATCAATACTGCTGAGCATATCCCAATACAATGCAAATTCTGAAAGCATAA

Function

NR:

description
PREDICTED: uncharacterized protein C6orf62 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039820417.1 True 2319 mRNA 0.41 5 18191093 18194027

Neighbor

gene id symbol gene type direction distance location
tdp2b tdp2,LOC102195294 coding downstream 1305 18186218 ~ 18189788 (-)
necab1 necab1 coding downstream 29421 18116387 ~ 18161672 (-)
si:ch211-57n23.1 LOC104947050,LOC103376119 coding downstream 95418 18092592 ~ 18095675 (-)
gatad1 gatad1 coding downstream 100175 18088391 ~ 18090918 (-)
LOC120571527 NA coding downstream 104050 18079544 ~ 18087043 (-)
ripor2 fam65b coding upstream 6849 18200876 ~ 18261263 (-)
si:dkeyp-120h9.1 LOC103376020,LOC104947060,LOC101167380 coding upstream 83752 18277779 ~ 18291741 (-)
hey1 hey1,LOC103376003 coding upstream 115052 18309079 ~ 18312003 (-)
zbtb10 zbtb10 coding upstream 172991 18367018 ~ 18383413 (-)
znf704 znf704 coding upstream 222594 18416621 ~ 18464516 (-)
LOC120571945 NA non-coding downstream 34970 18152470 ~ 18156123 (-)
G134535 NA non-coding downstream 76661 18114205 ~ 18114432 (-)
G134528 NA non-coding downstream 114662 18075047 ~ 18076431 (-)
G134499 NA non-coding downstream 124491 18066316 ~ 18066602 (-)
G134495 NA non-coding downstream 137381 18053245 ~ 18053712 (-)
G134544 NA non-coding upstream 58 18194085 ~ 18195073 (-)
G134546 NA non-coding upstream 3861 18197888 ~ 18200060 (-)
G134622 NA non-coding upstream 97756 18291783 ~ 18294923 (-)
G134623 NA non-coding upstream 103360 18297387 ~ 18303527 (-)
G134632 NA non-coding upstream 138595 18332622 ~ 18332932 (-)
rbm24a rbm24 other downstream 174065 18006128 ~ 18017028 (-)
si:ch211-199g17.9 LOC104947036 other downstream 246619 17938792 ~ 17944474 (-)
LOC120572101 NA other downstream 248993 17941968 ~ 17942100 (-)
snrpd1 snrpd1,LOC107655105,LOC107559756 other downstream 297664 17886458 ~ 17893429 (-)
si:ch211-215i13.3 baalc,LOC103376370,LOC104947028,LOC102079175,LOC102207491,LOC101482105,LOC103394441 other downstream 348859 17837572 ~ 17842234 (-)
G134893 LOC104963956 other upstream 1270318 19464345 ~ 19473111 (-)
tshz1 LOC103358534 other upstream 1330151 19524178 ~ 19690006 (-)
csmd3b LOC102796854,LOC102292540,LOC101468178 other upstream 1499028 19693055 ~ 20076540 (-)
G134942 NA other upstream 2044357 20238384 ~ 20239260 (-)
LOC120571828 NA other upstream 2754071 20948098 ~ 20953106 (-)

Expression


Co-expression Network