LOC120571543


Basic Information

Item Value
gene id LOC120571543
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 36306650 ~ 36317353 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039820545.1
ACACCAATCCACCATACTTTAacctgtaaaaataataataaaagttttaacagaagacaagactttggcctttattgggctAAATGTGCCTTCTGATATGAAGCACGTTTTTTTACGaaatcacagtttatgtatCGTCCAGTTATCAGATGGTTTCGTATTTTACGTTAATCAATCAAAACATCTGTGTCTGTTTTCTCAGCCTCCACCCTGAGATGTCACGTGTGTTCCGAGGGAGACCCGGTACAGAATGCCCTCAGGGTCAACAGTGTGCTGCAACGAAAATCGTTTCATACGAAGGTGGTTCAAAAGTTGAAATAAACTCACAAAAATGTCTCAAAGCTGAAGAGTGTGTCGATCACTCGATCAACTATGGACTCTCCCAAACCAAAGTTACCACCAAGTGTTGCAACACCCCTGACCTCTGCAACAAAGATCTGCTGGCCCCAGAACTCCAATCCAAACCAAACGGTAGACTGTGCTACTACTGCGATGATCATTCTTGCACCAACACCCTAATGTGTGAGGGGATTGAGCAATACTGCATCTCACTTACAGGCACCCAAGGAGGACAAAAGGTGACCGAGAAGGGCTGCGCCTCCAACTACATTTGCACTGCGAAGGATAAATTCTGGCCCGCAGAAATAACAACTAGCTGTTGCCAGGGCAACCTCTGCAACGGCGCCAGTAACCACGGCGCCGGCCTGGTTCTGCTGGTCGCCCCGCTGCTCTCTCTGCTCGTGACCTCTTATTAACTCCTGGAGATGCTGGAACCAGGGAGGGAAAGATGTAATTGagattatttttgactgatactGCGATTGTGATATGAGTCACGATATTGGAGGTTAATGACcaattttgtatcattattctcatttcattgaaatattgaagtgtgatatttttttttgcatgaatCTGTAGCAAGCAAAGATGATTTCTGTAGTTTGTAGGAGAGGATTTGTAGGCCtggatgtctctgcagcaccataatactttattttagaacggtttgacacatattgcactagtccatattgcgatttcgataaaattatgattaattgtgcagccctaactggacctttttcacagcagacatgttaacttgtcatagcaggaaaagcacagctgagattgatcaccttaacgatggctcagttccatcaagtgtcccagtaagatattacAGTGATAGTGAACTATATTTCTGtcagttaaagctatagtgcacacacacacacacacacagacacacacacacacaaatacacacacagacccacagaaacacacaca
>XM_039820546.1
tacacacagattcacagacccacacacacacatacacaaacacacacacacacatacattattttCTACATTATTCAGAAGTCTACTAACTGAACATCTTTCAATGAGAGAATTTTATACAACAGGCCAAACAGGAAATATTCTGTATTTTACCTGTAGCTACAgacaacatttatatttttaaattacgGGGCAAAGTCCGGTTAACCAGCTGCTCCCCTCCCCCCGTCACACATCCGGGCGGTATGAGCGAGTTTTTACGATGAAGACAACGCCTCCTCAGGAGAACTAAAGCCGTAACACATCAAACTAAAACTCAGTTGTATCCCTCCGTCAACATGTATCTCCTGGCGCTGATGTTCGGGATTCTGCTTCTACCTGAAGCCTCCACCCTGAGATGTCACGTGTGTTCCGAGGGAGACCCGGTACAGAATGCCCTCAGGGTCAACAGTGTGCTGCAACGAAAATCGTTTCATACGAAGGTGGTTCAAAAGTTGAAATAAACTCACAAAAATGTCTCAAAGCTGAAGAGTGTGTCGATCACTCGATCAACTATGGACTCTCCCAAACCAAAGTTACCACCAAGTGTTGCAACACCCCTGACCTCTGCAACAAAGATCTGCTGGCCCCAGAACTCCAATCCAAACCAAACGGTAGACTGTGCTACTACTGCGATGATCATTCTTGCACCAACACCCTAATGTGTGAGGGGATTGAGCAATACTGCATCTCACTTACAGGCACCCAAGGAGGACAAAAGGTGACCGAGAAGGGCTGCGCCTCCAACTACATTTGCACTGCGAAGGATAAATTCTGGCCCGCAGAAATAACAACTAGCTGTTGCCAGGGCAACCTCTGCAACGGCGCCAGTAACCACGGCGCCGGCCTGGTTCTGCTGGTCGCCCCGCTGCTCTCTCTGCTCGTGACCTCTTATTAACTCCTGGAGATGCTGGAACCAGGGAGGGAAAGATGTAATTGagattatttttgactgatactGCGATTGTGATATGAGTCACGATATTGGAGGTTAATGACcaattttgtatcattattctcatttcattgaaatattgaagtgtgatatttttttttgcatgaatCTGTAGCAAGCAAAGATGATTTCTGTAGTTTGTAGGAGAGGATTTGTAGGCCtggatgtctctgcagcaccataatactttattttagaacggtttgacacatattgcactagtccatattgcgatttcgataaaattatgattaattgtgcagccctaactggacctttttcacagcagacatgttaacttgtcatagcaggaaaagcacagctgagattgatcaccttaacgatggctcagttccatcaagtgtcccagtaagatattacAGTGATAGTGAACTATATTTCTGtcagttaaagctatagtgcacacacacacacacacacagacacacacacacacaaatacacacacagacccacagaaacacacaca
>XM_039820547.1
gaatgtgttggaaaagctggagacaggaaaggggggagagagcggagggaagacatgcagcaaagggtcacaGCTCGGATTCAGACCCTTGGCCGCTgcagtaaggactgagccttggcaCATCATGGTGCTCAACCAGCCTCCACCCTGAGATGTCACGTGTGTTCCGAGGGAGACCCGGTACAGAATGCCCTCAGGGTCAACAGTGTGCTGCAACGAAAATCGTTTCATACGAAGGTGGTTCAAAAGTTGAAATAAACTCACAAAAATGTCTCAAAGCTGAAGAGTGTGTCGATCACTCGATCAACTATGGACTCTCCCAAACCAAAGTTACCACCAAGTGTTGCAACACCCCTGACCTCTGCAACAAAGATCTGCTGGCCCCAGAACTCCAATCCAAACCAAACGGTAGACTGTGCTACTACTGCGATGATCATTCTTGCACCAACACCCTAATGTGTGAGGGGATTGAGCAATACTGCATCTCACTTACAGGCACCCAAGGAGGACAAAAGGTGACCGAGAAGGGCTGCGCCTCCAACTACATTTGCACTGCGAAGGATAAATTCTGGCCCGCAGAAATAACAACTAGCTGTTGCCAGGGCAACCTCTGCAACGGCGCCAGTAACCACGGCGCCGGCCTGGTTCTGCTGGTCGCCCCGCTGCTCTCTCTGCTCGTGACCTCTTATTAACTCCTGGAGATGCTGGAACCAGGGAGGGAAAGATGTAATTGagattatttttgactgatactGCGATTGTGATATGAGTCACGATATTGGAGGTTAATGACcaattttgtatcattattctcatttcattgaaatattgaagtgtgatatttttttttgcatgaatCTGTAGCAAGCAAAGATGATTTCTGTAGTTTGTAGGAGAGGATTTGTAGGCCtggatgtctctgcagcaccataatactttattttagaacggtttgacacatattgcactagtccatattgcgatttcgataaaattatgattaattgtgcagccctaactggacctttttcacagcagacatgttaacttgtcatagcaggaaaagcacagctgagattgatcaccttaacgatggctcagttccatcaagtgtcccagtaagatattacAGTGATAGTGAACTATATTTCTGtcagttaaagctatagtgcacacacacacacacacacagacacacacacacacaaatacacacacagacccacagaaacacacaca

Function

GO:

id name namespace
GO:0006508 proteolysis biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039820545.1 False 1302 mRNA 0.43 4 36311330 36317353
XM_039820546.1 True 1484 mRNA 0.44 5 36307227 36317353
XM_039820547.1 False 1239 mRNA 0.46 5 36306650 36317353

Neighbor

gene id symbol gene type direction distance location
LOC120571542 NA coding upstream 13914 36282283 ~ 36292736 (+)
LOC120570973 NA coding upstream 28834 36274913 ~ 36277816 (+)
LOC120571441 NA coding upstream 50529 36195350 ~ 36256121 (+)
LOC120570972 NA coding upstream 153424 36148521 ~ 36153226 (+)
riok1 riok1 coding upstream 302416 35979893 ~ 36004234 (+)
LOC120570974 NA coding downstream 10333 36327686 ~ 36335190 (+)
anp32e anp32e,LOC103368512 coding downstream 44972 36362325 ~ 36372221 (+)
LOC120570975 LOC103373434,LOC108250522 coding downstream 241507 36558860 ~ 36605823 (+)
LOC120571059 NA coding downstream 340021 36657374 ~ 36659184 (+)
LOC120571067 NA coding downstream 412040 36729393 ~ 36731238 (+)
G138842 NA non-coding upstream 15932 36274432 ~ 36290718 (+)
G138838 NA non-coding upstream 47684 36258032 ~ 36258966 (+)
G138837 NA non-coding upstream 48839 36257537 ~ 36257811 (+)
G138755 NA non-coding upstream 57602 36235670 ~ 36249048 (+)
G138731 LOC106675582 non-coding upstream 59930 36229118 ~ 36246720 (+)
G138844 NA non-coding downstream 12633 36329986 ~ 36353148 (+)
G138662 NA non-coding downstream 38765 36356118 ~ 36360099 (+)
G138742 NA non-coding downstream 50674 36368027 ~ 36413303 (+)
LOC120571615 NA non-coding downstream 55199 36372552 ~ 36373009 (+)
G138847 NA non-coding downstream 56657 36374010 ~ 36375755 (+)
G138676 NA other upstream 49331 36065371 ~ 36257319 (+)
G138693 NA other upstream 59566 36229330 ~ 36247084 (+)
LOC120571442 LOC106675582,LOC106676446 other upstream 90823 36106717 ~ 36215827 (+)
G138711 LOC106675582,LOC106676000 other upstream 90979 36138147 ~ 36215671 (+)
LOC120571445 LOC106675582,LOC106676976 other upstream 202113 36009987 ~ 36104537 (+)
gabpb2a gabpb2,LOC102789669 other downstream 21043 36338396 ~ 36354102 (+)
G138883 NA other downstream 175750 36493103 ~ 36505934 (+)
G138668 NA other downstream 195253 36512606 ~ 36516582 (+)
LOC120571613 NA other downstream 209176 36526529 ~ 36532535 (+)
LOC120571069 NA other downstream 670600 36987953 ~ 36989697 (+)

Expression


Co-expression Network