si:dkeyp-120h9.1 (LOC103376020,LOC104947060,LOC101167380)


Basic Information

Item Value
gene id si:dkeyp-120h9.1
gene name LOC103376020,LOC104947060,LOC101167380
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 18277779 ~ 18291741 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039820680.1
ATTAAATCTGAAATGAGTATTTATTGAGTAATGTTAAGGGTTTATTTCTTAGTCTTGGTGCCATTGTTTGGTCTGCACCACAGTTCAATTGACAGCTTTCACAGCACCCTAAACAAAATTTGTTTTATGCTCTATAGTCTCTCCTCATTTCTTGTCATGCAGGGGGTTCTTAAGTACACAGGCTCGTTTGGCCTGTCCCTGGTAGTGTGGGCCATTGGAGGGATATTTTCAGTGTTTGGAGCGCTATGCTATGCTGAGCTGGGTACTACCATCCGTAAATCTGGTGCTTCCTATGCCTACATCCTGGAGGCTTTTGGAGGTTTCTTGGCTTTTATTCGATTGTGGACGTCGTTGTTGATAGTTGAGCCTGCTTGTCAGGCAGTGATAGCTCTGACCTTCTCCAACTACCTGGTTAAGCCCTTCTACCCCAGCTGTCCAGCGCCCTATGTCGCCGTCCGCCTCATCGCTGCTGTCATcatatGTCTGCTGACCTGTGTGAACTGTATGAAAGTGAAATGGGGTGCTATTCTTCAGGTCATCTCCACTGTAGCCAAGGTCCTAGCTCTCATTGTCATCATTATTACTGGCCTGGTAAAGCTGGGACAAGGTTTTGACCAGAACTTTGAGGACTCATTCAAAGGCTCCAAACTGGACCCTGGTAACATGGCCTTGGCCCTCTATTCAGCACTCTATTCATACTCTGGCTGGGACACACTCAACTTCATCACGGAGGAGATCAAAAACCCAGAGAGGAATCTGCCCTTGGCCATCGCTATTTCCATGCCCATTGTCACTGTGATCTACATCTTGACAAATGTAGCTTACTACGTTGTCATGGATGCAGACAAAGTGCTCAGCAGCGAAGCCGTTGCTGTGACATTTGCAGATGAGGTGCTGGGCTGGGGTCGATGGCTGATCCCTCTGTCTGTGGCCATTTCCTGCTACGGAGGCCTCAACTCCTCCATCATCGCTGCCTCCAGgttgttttttgttggtTCCAGAGAAGGCCACCTGCCTAATGTGCTGTGCATGATCCACATAAAGCGTTTCACACCAATTCCTGCCCTGCTTTTCAACGGTGGCATGTCTCTGTTCTTCCTGTCTGTGCCTGATGTTTTCCAGTTGATCAACTACTTCAGTTTCAACTACTGGTTGTTCATCGGCCTGTCAATAGCCAGCCTGATCTACCTTCGCGTCAAAGCTCCTGATATGCATCGACCAGTAAAGCTGTCTTTGTTCTTCCCGATCGTCTACTGCTTGTGCAGCGTATTCCTTGTAGTGGTTCCCCTCTACAGCGACACCATCAACTCTCTGGTGGGAATTGCTGTGGCGCTGTCTGGTGTACCAGTCTACTTCATTTGCATCCACCTGCCACCCAGCTCCAGACCAGCCTTCCTCAGTGAAATGCTCAATAAGCTCTCTCTGTACACCCAAAAactgtgcatgtgttgtgtggcCTCGCCTGATATCGACCTGGACAATATAGACCCAGACAAGATGGAATGATGGAGCAACAAAGGCCTTGTGTGAAATGCTGTATGGAGGGATGGGAGAGGAAGAATGAACACAAAGGAAGCTGTGAGCTGCAGACAATCAGGATTTGGATAAGTACAGTCTGATCGATTTTAAAGAAGAATGAAGAAACCGGAGAGGTGAGCTCAACACACATCCTCTCCCCTCACACATGAGCCATATGTACAAAGGAGAAGGCTTTTGCTCTGAATAAATAGTGTACATGATAACCCCAACAACTTGGTGAAAGCTGAGCACATTCACATGTTTACACAatgcagcaacacacacacacacacacacacacgcgcaagtTGAAGGAAAACCTTAGGGGGACACTGCGACAAATGGAAATTAACAACCCGATCCAGAAGGTACTGACTCAGCAAAGATGCCTGAGCTGATATATTTACAAACAGGAGGTTGTTAAGGAAAACACACAGAGGTGGATTTGAAAACTGCCATGCTTTACATGTGTTGCATCACATGGATGGATGGTTAAAACCTTGTGACCCTTTTTGAAATGATGCTTGTGAACCCTCAATCACAGGTTGCAAACggtgatttttcttttccttcttattTGAACTTTTTTAGGGGCCTTAAGATtgtaaaatgaattaataattcacaagcaaagaaaaaaaaaacattgattagaaaaaaagtcagaaaaagaagCATTTTCATGTTTGATTACACGCAACCCAATGGGGTGGGTCTGTAAAGGTTTTAATTGGTGTGCATCAACATCAGACGGGTAATTTGGCAGTGTGTGGTACTCATAAAACTAAGAGTTTAAACATCAACTTTATTGGTGAGGCAGTCAGACGATGTCCAAAAATATTGTTTTCAGACTTATTGACAGACCTCTCCAGCAAATTTGCACATCAcatttgtattttctgttttgtttgacaacTACCTTGGTTATAGAAAGGCTTTATTCTGATCTATTATAGAACTGGACCAAATGGAAAGATGTTTAGAGAGATTATTtacaaaagtgctgtttttccTTGCTGTTTGAACAAGCCTGTTCTGATGCGTCCGTTGAATAGGAGTATGATGATACATCCGTCACTATATGCTTCCTGCTTTTCTTTCCACCTCAGTAATGCATGTGAAATGTTTTCAATCCTTTGATGCATCAGGGCTGTATTTGATTTCTGGTGCCTTCTAGTGGTAGCTAATAATAACTTCCAGGGATAAGCAATGAGATAAAGTGTCATTCCAGTCCATCTACAATTTGCATGTTTTTGTTTATGCTGTTGTCATATTGTCACCTTGTTCTCTCttttcaaacaaacacaaactggTGAGAGGAATGTAACTGTAATGTAAGTGTtggatatataaaaaatgttttaaaaatatgtgatTGTTTCTGGATTTAACAAATGTACCTGCCAGACTCCTAGGTAATGTTTGTCGTCAGTATGCAGTCTTTGTTGAAACAAGCCTCAGGATCAACCATGCTGATGGGCACATGTTGCTGATATTTatgatctttatttttttagccgCTCTTGTCTTTAGAGTTTGTATCACAAATGGGAGATTTAATGTAATTGTTGCCTTGTGAATATATCACCAACTTGGACCATTTAGTCACCGTGCATAGCCAAAGGTCTTAAACAAGCTGATAGTTGGAACATCTTTCTGCTCACAGAGTGCAGTGGGCCCGTAGCAAAATGTCTACTTTTTAGTGAGAAAATTATAGCTGTAGTGTGCTGAGCTACAGATAGAAATGAGTCAAACTTTGGTGTTTGTACTGTAGTCCTTATGAGCTGTATGTGCCTTCTGTTAGTGTGGTCTGCCAAAGGCCCTGTCTATTTTTGATATTGTAACGTACGTAGCTCTTGAGCACAATCATTGACTCGTGGGTTTGCCAAATGTTTTTCAGGTGGttgagcagcttcacatcttaGCAAAGGTCGGTTAACTCTCAACTAGACATAATCGGGCCTTTAGATTGAACCATATGCAGTGTCTTGAGTCAAGCACTTTCACAACACCAGCCAATAGAAGCACACCGATATCTGTTTAATGTTGCTTTCTCTCTGTCATCATTTAAACacacttttgtgtgtgttgtgtgtgtgaagaaaaCTACCATATATCTGCAGTAAaccatttaaatgtattttcatataTTGCCATGTTATGAACTCATATATACTTACATGACTTGAATGTTGCAGTATATTTGATGTGTTTCATTGGGTACCAAATactgaatgtgtgtttttgtgcttgGTTCGTGTTTGACAAAGTTGTATATTTGTAGAATTGTTTAAGTGCTTGCTTTGttgactgtttttttatttaaaccaaaTGGCAAGAGATGCTATACAGTGAAGGGCTGAGACAGAAggttgctgtgttttatttgaataaagGCAAGTACAGAATGTT

Function

NR:

description
PREDICTED: Y+L amino acid transporter 2-like

GO:

id name namespace
GO:0003333 amino acid transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0015171 amino acid transmembrane transporter activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039820680.1 True 3930 mRNA 0.42 10 18277779 18291741

Neighbor

gene id symbol gene type direction distance location
ripor2 fam65b coding downstream 16516 18200876 ~ 18261263 (-)
c13h6orf62 clg22h6orf62,LOC108240366,LOC102228185,LOC101464686,LOC104924567,LOC107087843,LOC103135136,LOC106515831,LOC104947055 coding downstream 83752 18191093 ~ 18194027 (-)
tdp2b tdp2,LOC102195294 coding downstream 87991 18186218 ~ 18189788 (-)
necab1 necab1 coding downstream 116107 18116387 ~ 18161672 (-)
si:ch211-57n23.1 LOC104947050,LOC103376119 coding downstream 182104 18092592 ~ 18095675 (-)
hey1 hey1,LOC103376003 coding upstream 17338 18309079 ~ 18312003 (-)
zbtb10 zbtb10 coding upstream 75277 18367018 ~ 18383413 (-)
znf704 znf704 coding upstream 124880 18416621 ~ 18464516 (-)
pag1 pag1 coding upstream 173835 18465576 ~ 18515333 (-)
gmpr gmpr coding upstream 386178 18677919 ~ 18687547 (-)
G134546 NA non-coding downstream 77719 18197888 ~ 18200060 (-)
G134544 NA non-coding downstream 82706 18194085 ~ 18195073 (-)
LOC120571945 NA non-coding downstream 121656 18152470 ~ 18156123 (-)
G134535 NA non-coding downstream 163347 18114205 ~ 18114432 (-)
G134528 NA non-coding downstream 201348 18075047 ~ 18076431 (-)
G134622 NA non-coding upstream 42 18291783 ~ 18294923 (-)
G134623 NA non-coding upstream 5646 18297387 ~ 18303527 (-)
G134632 NA non-coding upstream 40881 18332622 ~ 18332932 (-)
G134629 NA non-coding upstream 118206 18409947 ~ 18412997 (-)
G134652 NA non-coding upstream 168405 18460146 ~ 18470374 (-)
rbm24a rbm24 other downstream 260751 18006128 ~ 18017028 (-)
si:ch211-199g17.9 LOC104947036 other downstream 333305 17938792 ~ 17944474 (-)
LOC120572101 NA other downstream 335679 17941968 ~ 17942100 (-)
snrpd1 snrpd1,LOC107655105,LOC107559756 other downstream 384350 17886458 ~ 17893429 (-)
si:ch211-215i13.3 baalc,LOC103376370,LOC104947028,LOC102079175,LOC102207491,LOC101482105,LOC103394441 other downstream 435545 17837572 ~ 17842234 (-)
G134893 LOC104963956 other upstream 1172604 19464345 ~ 19473111 (-)
tshz1 LOC103358534 other upstream 1232437 19524178 ~ 19690006 (-)
csmd3b LOC102796854,LOC102292540,LOC101468178 other upstream 1401314 19693055 ~ 20076540 (-)
G134942 NA other upstream 1946643 20238384 ~ 20239260 (-)
LOC120571828 NA other upstream 2656357 20948098 ~ 20953106 (-)

Expression


Co-expression Network