LOC120571790 (LOC103369207)


Basic Information

Item Value
gene id LOC120571790
gene name LOC103369207
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 34524270 ~ 34536470 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039820878.1
GCTAATTAAACTATTCTTACTCTGTTTTTAAGTCCCGTAATCTAGGTAGGGTTGCTGCGTTGATTTGCCATTCGAGTCAGACATAGAGAGGGGAAATGAGAGCTGGAGACCCATGACACACTTTTCTCTAACTGAGAAACGAAGACGCCCTGTTCACGCAGTGGAGACGTACTGGAAACCAATTGTAGAGAACATTACGGACGCCATATACGGCAGCAGGAAGACCATCTGTGTGATCACCCGGCGTTACCTGCAGAGCGAGTGGTGCTCCAGAGAGATCCAGATGGCCAGCTTCCGTCTGTTTGACGAGCAGAAGGATGTGTTGATCCTGCTATTTCTGGAGGAGATCCCGGCCCACCAGCTGTCTCCGTACTACCGCATGAGGAAGCTGGTGAAGAAACGCACCTACCTGAGTTGGCCCCAGGCCGGCCATCACACGGGACTCTTCTGGCAGAACGTAGGGAGAGCTCTGGAGACGGGGGATGCTCCCACCGAGACCGCTGACCTGCTCACTGGACCGGCAGGATGCTGAGATACATCGGTtggaaaaaagctacaa

Function

NR:

description
PREDICTED: toll-like receptor 13

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039820878.1 True 559 mRNA 0.53 4 34524270 34536470

Neighbor

gene id symbol gene type direction distance location
LOC120571787 NA coding upstream 2880 34513837 ~ 34521390 (+)
LOC120570953 NA coding upstream 96180 34413357 ~ 34428090 (+)
LOC120571619 NA coding upstream 335845 34180802 ~ 34188425 (+)
LOC120571616 NA coding upstream 362214 34157845 ~ 34162056 (+)
LOC120570951 NA coding upstream 399278 34112095 ~ 34124992 (+)
LOC120571785 NA coding downstream 41987 34578457 ~ 34589114 (+)
LOC120571789 NA coding downstream 66237 34602707 ~ 34608729 (+)
LOC120571600 NA coding downstream 93574 34630044 ~ 34638294 (+)
LOC120571392 NA coding downstream 106361 34642831 ~ 34649286 (+)
LOC120570955 NA coding downstream 138195 34674665 ~ 34683726 (+)
G138510 NA non-coding upstream 62331 34461681 ~ 34461939 (+)
G138477 NA non-coding upstream 70507 34445122 ~ 34453763 (+)
G138465 NA non-coding upstream 214739 34308579 ~ 34309531 (+)
G138456 NA non-coding upstream 317538 34206319 ~ 34206732 (+)
G138454 NA non-coding upstream 320535 34202931 ~ 34203735 (+)
LOC120571427 NA non-coding downstream 283935 34820405 ~ 34824367 (+)
LOC120571431 NA non-coding downstream 347825 34884295 ~ 34887973 (+)
G138586 NA non-coding downstream 420413 34956883 ~ 35006398 (+)
G138599 NA non-coding downstream 494544 35031014 ~ 35031789 (+)
G138646 NA non-coding downstream 592435 35128905 ~ 35129153 (+)
LOC120571618 NA other upstream 345724 34163590 ~ 34178546 (+)
LOC120572047 NA other upstream 551827 33755237 ~ 33972443 (+)
LOC120571788 LOC103147980,LOC106964283,LOC107396830,LOC103369207 other downstream 3607 34540077 ~ 34573377 (+)
LOC120570959 NA other downstream 703825 35240295 ~ 35290255 (+)
mllt11 NA other downstream 762817 35299287 ~ 35316864 (+)
LOC120570961 NA other downstream 835497 35371967 ~ 35377206 (+)
mindy1 fam63a other downstream 842369 35378839 ~ 35444328 (+)

Expression


Co-expression Network