LOC120572089


Basic Information

Item Value
gene id LOC120572089
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 33961255 ~ 33965336 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005641352.1
TATTACTGTCTCATTTATATCAGTATCTTTACGTTAGTACGTAATTGTATTGTTAGCTTTTAGGATATCAGTAACTATAGTCATTTGTTTAACACTGGATGTCACTGTGCTGAACTGACTCAATTTCTGTGAATGGCTGTACAAATATTCAtgtgaacatactgtatacctGAAGCCTTATCTTACTCCTGTCTAGATAATTACGTTGTTACCTCACTCCATATCAACAAGCATAATCTTATTGTGCCTTACTGGTTAATTAATGAtaatttctccctttttctacACAAGATTTCAACTGAGGCAGAGGGTTACCATGCGGTCTTGGCATCTGACAGCCTCAAATATGTTGAAAAGATTTCAACTGAGGCAGAGGGTTACCATGCGGTCTTGGCATCTGACAGCCTCAAAGATGTTGAAAAGAGGATCATCATGGTACCGTgataatctgacagctttaaagATGTTGAAAAGGTGACTTAATCTCTATTTAATTTTGATAT

Function

GO: NA

KEGG:

id description
ko04024 cAMP signaling pathway

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005641352.1 True 503 lncRNA 0.36 3 33961255 33965336

Neighbor

gene id symbol gene type direction distance location
LOC120572085 NA coding upstream 59733 33891128 ~ 33901522 (+)
LOC120572043 NA coding upstream 73358 33876644 ~ 33887897 (+)
LOC120572041 NA coding upstream 110327 33825830 ~ 33850928 (+)
LOC120572040 NA coding upstream 141388 33811365 ~ 33819867 (+)
LOC120572062 NA coding upstream 238349 33722399 ~ 33722906 (+)
LOC120570950 NA coding downstream 61332 34026668 ~ 34110018 (+)
LOC120572052 NA coding downstream 76491 34041827 ~ 34049150 (+)
LOC120572050 NA coding downstream 120707 34086043 ~ 34094245 (+)
LOC120570951 NA coding downstream 146759 34112095 ~ 34124992 (+)
LOC120571616 NA coding downstream 192509 34157845 ~ 34162056 (+)
LOC120572088 NA non-coding upstream 36692 33922662 ~ 33924563 (+)
G138364 NA non-coding upstream 49630 33884509 ~ 33911625 (+)
G138366 NA non-coding upstream 51843 33894930 ~ 33909412 (+)
G138359 NA non-coding upstream 97319 33860772 ~ 33863936 (+)
G138323 NA non-coding upstream 214943 33600507 ~ 33746312 (+)
G138375 NA non-coding downstream 5682 33971018 ~ 33979179 (+)
LOC120570947 NA non-coding downstream 12173 33977509 ~ 33979950 (+)
LOC120570948 NA non-coding downstream 21443 33986779 ~ 33998600 (+)
G138444 NA non-coding downstream 185262 34150598 ~ 34150826 (+)
G138450 NA non-coding downstream 199047 34164383 ~ 34165543 (+)
LOC120572044 NA other upstream 14292 33890732 ~ 33946963 (+)
LOC120572054 deptor other upstream 87961 33861199 ~ 33873294 (+)
LOC120572071 NA other upstream 183779 33774507 ~ 33777476 (+)
LOC120572057 NA other upstream 211900 33697312 ~ 33749355 (+)
G138335 NA other upstream 238405 33715311 ~ 33722850 (+)
LOC120571618 NA other downstream 198254 34163590 ~ 34178546 (+)
LOC120571788 LOC103147980,LOC106964283,LOC107396830,LOC103369207 other downstream 574741 34540077 ~ 34573377 (+)
LOC120570959 NA other downstream 1274959 35240295 ~ 35290255 (+)
mllt11 NA other downstream 1333951 35299287 ~ 35316864 (+)
LOC120570961 NA other downstream 1406631 35371967 ~ 35377206 (+)

Expression


Co-expression Network