G140235


Basic Information

Item Value
gene id G140235
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 170753 ~ 170973 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU189156
tggctgtaatgttttccattttggatgttgaagattaagaacaagactttcaaaggagttataatttaatttaggtttaggagtaattaacaggcttgcatcaaagatggctgcaactccccctcctcggcctgagcctctaggaatttgagtattaatatgactgggaggagtggcttcatttagactaacatagtcttcatggcccagccaggtttcag

Function

GO:

id name namespace
GO:0004690 cyclic nucleotide-dependent protein kinase activity molecular_function
GO:0004692 cGMP-dependent protein kinase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU189156 True 221 lncRNA 0.41 1 170753 170973

Neighbor

gene id symbol gene type direction distance location
LOC120573670 NA coding upstream 100087 69341 ~ 70666 (+)
LOC120573509 NA coding downstream 143046 314019 ~ 315451 (+)
LOC120573607 NA coding downstream 372156 543129 ~ 544442 (+)
LOC120573513 NA coding downstream 577671 748644 ~ 751655 (+)
LOC120573672 LOC105024657,LOC106023958 coding downstream 619885 790858 ~ 793879 (+)
LOC120573671 LOC107990212,LOC107990219,LOC107990208 coding downstream 641570 812543 ~ 815209 (+)
G140218 NA non-coding upstream 3487 166954 ~ 167266 (+)
G140217 NA non-coding upstream 8085 162242 ~ 162668 (+)
G140203 NA non-coding upstream 125323 45061 ~ 45430 (+)
G140261 NA non-coding downstream 152333 323306 ~ 323708 (+)
G140265 NA non-coding downstream 191090 362063 ~ 362301 (+)
G140271 NA non-coding downstream 249921 420894 ~ 421514 (+)
G140286 NA non-coding downstream 332488 503461 ~ 503732 (+)
G140292 rubcnl non-coding downstream 393328 564301 ~ 564877 (+)
G140263 NA other downstream 164909 335882 ~ 336176 (+)
LOC120572292 NA other downstream 450143 621116 ~ 623035 (+)
frem1a frem1,LOC106908230,LOC105925506,LOC101079287,LOC108244244 other downstream 1506237 1677210 ~ 1725468 (+)
G140582 NA other downstream 1758650 1929623 ~ 2030627 (+)
G140594 NA other downstream 1851619 2022592 ~ 2032225 (+)

Expression


Co-expression Network