G140249


Basic Information

Item Value
gene id G140249
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 280547 ~ 280863 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU189170
aacaaaaacaactattagtgtgtttatgcacctggctctagagaaggagacagacctggagcaaagagaaggagccttaatcttccagccaactgcaggactcatctgaagatgacacaagtttctggtcTGACAAAATGgccactggtgtcctccaactctgtgagtgcctctaaccttcctctgaaagtggagaggacactgaagatcctgtccatcctaacattgaatggacagtgaagaattggcaagtctggtctccatctaatactgagacgctgcgcaacattcaagcaccgaccggcatgatgtcagag

Function

GO:

id name namespace
GO:0044421 obsolete extracellular region part cellular_component
GO:0005615 extracellular space cellular_component

KEGG:

id description
ko04610 Complement and coagulation cascades
ko05150 Staphylococcus aureus infection

RNA

RNA id representative length rna type GC content exon number start site end site
TU189170 True 317 lncRNA 0.47 1 280547 280863

Neighbor

gene id symbol gene type direction distance location
LOC120573587 NA coding downstream 142310 135443 ~ 138237 (-)
LOC120573590 NA coding upstream 319771 600634 ~ 606718 (-)
LOC120573525 mrps28 coding upstream 625682 906545 ~ 913680 (-)
sorcs2 sorcs2 coding upstream 737395 1018258 ~ 1429717 (-)
LOC120573289 NA coding upstream 1211411 1492274 ~ 1500316 (-)
slc1a1 slc1a1 coding upstream 1269665 1550528 ~ 1574124 (-)
G140240 NA non-coding downstream 61648 218502 ~ 218899 (-)
G140238 NA non-coding downstream 108879 171459 ~ 171668 (-)
G140237 NA non-coding downstream 109167 171174 ~ 171380 (-)
G140236 NA non-coding downstream 109544 170572 ~ 171003 (-)
G140234 NA non-coding downstream 111386 168949 ~ 169161 (-)
G140254 NA non-coding upstream 28521 309384 ~ 309621 (-)
G140264 NA non-coding upstream 56679 337542 ~ 337763 (-)
LOC120572356 NA non-coding upstream 87475 368338 ~ 369120 (-)
G140268 NA non-coding upstream 92974 373837 ~ 374216 (-)
trnam-cau_27 NA non-coding upstream 98648 379511 ~ 379582 (-)
G140274 NA other upstream 162687 443550 ~ 451670 (-)
tada2b tada2b other upstream 1201926 1482789 ~ 1488426 (-)
tspan5a LOC100711712,LOC102299272,LOC102195201,LOC105938388,LOC103480072 other upstream 1342396 1623259 ~ 1649432 (-)
LOC120573528 NA other upstream 1646269 1927132 ~ 2032506 (-)
G140615 NA other upstream 1770618 2051481 ~ 2058191 (-)

Expression


Co-expression Network