G140291



Basic Information


Item Value
gene id G140291
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 556402 ~ 556667 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU189213
AAAATAGgggcccatctaaagctgctgatcttgcatcacttgacataaaagggCCACTAGTGAAGTGACGCACCGCAGAATactggctgaaggaagcctattactgctcaaagtctaacactgcaaaactccagctcttcttatcaaacgtaacagtcacttacctcatggttacaaatgtaaaccagcacaacaatgacaattaccaggcaacaaaacattacattctaagcagacacgtttaataaacgaattcataaagttac

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU189213 True 266 lncRNA 0.40 1 556402 556667

Neighbor


gene id symbol gene type direction distance location
LOC120573587 NA coding downstream 418165 135443 ~ 138237 (-)
LOC120573590 NA coding upstream 43967 600634 ~ 606718 (-)
LOC120573525 mrps28 coding upstream 349878 906545 ~ 913680 (-)
sorcs2 sorcs2 coding upstream 461591 1018258 ~ 1429717 (-)
LOC120573289 NA coding upstream 935607 1492274 ~ 1500316 (-)
slc1a1 slc1a1 coding upstream 993861 1550528 ~ 1574124 (-)
LOC120572316 NA non-coding downstream 33344 500240 ~ 523058 (-)
G140285 NA non-coding downstream 56786 499258 ~ 499616 (-)
G140275 NA non-coding downstream 113387 442656 ~ 443015 (-)
trnal-aag_5 NA non-coding downstream 128918 427403 ~ 427484 (-)
LOC120573351 LOC106511981,LOC106522237,LOC106533251 non-coding downstream 134873 420927 ~ 421529 (-)
LOC120573382 NA non-coding upstream 68546 625213 ~ 626442 (-)
G140307 NA non-coding upstream 76060 632727 ~ 632947 (-)
G140308 NA non-coding upstream 76979 633646 ~ 633845 (-)
G140314 NA non-coding upstream 189921 746588 ~ 746860 (-)
G140338 NA non-coding upstream 319155 875822 ~ 876346 (-)
G140274 NA other downstream 104732 443550 ~ 451670 (-)
tada2b tada2b other upstream 926122 1482789 ~ 1488426 (-)
tspan5a LOC100711712,LOC102299272,LOC102195201,LOC105938388,LOC103480072 other upstream 1066592 1623259 ~ 1649432 (-)
LOC120573528 NA other upstream 1370465 1927132 ~ 2032506 (-)
G140615 NA other upstream 1494814 2051481 ~ 2058191 (-)
camk2d1 LOC100695450,LOC101472930 other upstream 1897399 2454066 ~ 2573483 (-)

Expression



Co-expression Network