G140309


Basic Information

Item Value
gene id G140309
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 659708 ~ 659918 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU189231
CATATATGGCATGTGTTCCTTCGACCCACCTAATGTGACCAGGATCTCGCATCGGGACGGGGTGCCGCCTATGTGCAAGTTTACCAAGCTCACCTGTCCTGAGAACAGAGCTAACTCTAACAGACTCATTTCGGCCAGCGGCATACTGAACCCACTCCTCAGCGCACGGGTAGAACACGGAGAGCTAGATCTCACTCAATGTGGAGAGTCG

Function

GO:

id name namespace
GO:0005201 extracellular matrix structural constituent molecular_function

KEGG:

id description
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU189231 True 211 lncRNA 0.54 1 659708 659918

Neighbor

gene id symbol gene type direction distance location
LOC120573607 NA coding upstream 115266 543129 ~ 544442 (+)
LOC120573509 NA coding upstream 344257 314019 ~ 315451 (+)
LOC120573670 NA coding upstream 589042 69341 ~ 70666 (+)
LOC120573513 NA coding downstream 88726 748644 ~ 751655 (+)
LOC120573672 LOC105024657,LOC106023958 coding downstream 130940 790858 ~ 793879 (+)
LOC120573671 LOC107990212,LOC107990219,LOC107990208 coding downstream 152625 812543 ~ 815209 (+)
LOC120573524 NA coding downstream 203400 863318 ~ 890296 (+)
grpel1 grpel1,LOC102799061 coding downstream 808446 1468364 ~ 1478441 (+)
G140292 rubcnl non-coding upstream 94831 564301 ~ 564877 (+)
G140286 NA non-coding upstream 155976 503461 ~ 503732 (+)
G140271 NA non-coding upstream 238194 420894 ~ 421514 (+)
G140265 NA non-coding upstream 297407 362063 ~ 362301 (+)
G140261 NA non-coding upstream 336000 323306 ~ 323708 (+)
G140313 NA non-coding downstream 86672 746590 ~ 746890 (+)
LOC120573673 NA non-coding downstream 136790 796708 ~ 801154 (+)
LOC120572243 NA non-coding downstream 166070 825988 ~ 833455 (+)
G140341 NA non-coding downstream 219182 879100 ~ 879497 (+)
G140343 NA non-coding downstream 220459 880377 ~ 880855 (+)
LOC120572292 NA other upstream 36673 621116 ~ 623035 (+)
G140263 NA other upstream 323532 335882 ~ 336176 (+)
frem1a frem1,LOC106908230,LOC105925506,LOC101079287,LOC108244244 other downstream 1017292 1677210 ~ 1725468 (+)
G140582 NA other downstream 1269705 1929623 ~ 2030627 (+)
G140594 NA other downstream 1362674 2022592 ~ 2032225 (+)
G140613 NA other downstream 1395521 2055439 ~ 2059367 (+)
ablim2 ablim2 other downstream 2168134 2828052 ~ 2954690 (+)

Expression


Co-expression Network