G140314



Basic Information


Item Value
gene id G140314
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 746588 ~ 746860 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU189236
agaagaagatttatttatttatattaggacaatgcacattaatgaacatttctgtaaatgcgccagtgttagccagtcggctaattttcaactgtagtcctagttgcgtgcatgtctttatggtgggaagaaaccggagcacccggaggaaacccacgcaagcacggggagaacatgcaaactccacacagaaaggtccGGGACGACCTgggttcgaacccagaaccttcttgctgtgaggcagaagtgctaaccactgagccaccgtgctgc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU189236 True 273 lncRNA 0.48 1 746588 746860

Neighbor


gene id symbol gene type direction distance location
LOC120573590 NA coding downstream 139870 600634 ~ 606718 (-)
LOC120573587 NA coding downstream 608351 135443 ~ 138237 (-)
LOC120573525 mrps28 coding upstream 159685 906545 ~ 913680 (-)
sorcs2 sorcs2 coding upstream 271398 1018258 ~ 1429717 (-)
LOC120573289 NA coding upstream 745414 1492274 ~ 1500316 (-)
slc1a1 slc1a1 coding upstream 803668 1550528 ~ 1574124 (-)
LOC120573508 LOC103361692 coding upstream 913277 1660137 ~ 1664945 (-)
G140308 NA non-coding downstream 112743 633646 ~ 633845 (-)
G140307 NA non-coding downstream 113641 632727 ~ 632947 (-)
LOC120573382 NA non-coding downstream 120146 625213 ~ 626442 (-)
G140291 NA non-coding downstream 189921 556402 ~ 556667 (-)
LOC120572316 NA non-coding downstream 223530 500240 ~ 523058 (-)
G140338 NA non-coding upstream 128962 875822 ~ 876346 (-)
G140348 NA non-coding upstream 156548 903408 ~ 903639 (-)
G140349 NA non-coding upstream 163598 910458 ~ 910675 (-)
G140355 NA non-coding upstream 205296 952156 ~ 952472 (-)
G140360 NA non-coding upstream 266105 1012965 ~ 1013182 (-)
G140274 NA other downstream 294918 443550 ~ 451670 (-)
tada2b tada2b other upstream 735929 1482789 ~ 1488426 (-)
tspan5a LOC100711712,LOC102299272,LOC102195201,LOC105938388,LOC103480072 other upstream 876399 1623259 ~ 1649432 (-)
LOC120573528 NA other upstream 1180272 1927132 ~ 2032506 (-)
G140615 NA other upstream 1304621 2051481 ~ 2058191 (-)
camk2d1 LOC100695450,LOC101472930 other upstream 1707206 2454066 ~ 2573483 (-)

Expression



Co-expression Network