G140343


Basic Information

Item Value
gene id G140343
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 880377 ~ 880855 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU189271
ttctgattccatggtgcggagccgtgactcaaattcactaagccttgcctccaaaacagcgaatatactacatttattacatgtatcgttatcactaaaggaggcagaggaatagctaaacatttgacacacagagcaagagagagcaggagagggagaggaattagccattgctaatggctaagctaaagtagctaacagtgttttaacaattgtaaattcagcgagtcagtcgctgtaagtgaagctaagtataagtgcttgagtaaaacaattgtaattcaaatgcaatccaggcaaatagctgctaatttaaacagtgaagcagagttcagtaagtttttgccggagcagcaaactagcgtttgtaacacgggaacaccggaagtgacacaatacgctcaccttacacgtcggcacgtCGTCTCCACAGCCTACAAGACCGCCGCACACACGTCTCAATcaaaaaatcagaaaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU189271 True 479 lncRNA 0.43 1 880377 880855

Neighbor

gene id symbol gene type direction distance location
LOC120573671 LOC107990212,LOC107990219,LOC107990208 coding upstream 65168 812543 ~ 815209 (+)
LOC120573672 LOC105024657,LOC106023958 coding upstream 86498 790858 ~ 793879 (+)
LOC120573513 NA coding upstream 128722 748644 ~ 751655 (+)
LOC120573607 NA coding upstream 335935 543129 ~ 544442 (+)
LOC120573509 NA coding upstream 564926 314019 ~ 315451 (+)
grpel1 grpel1,LOC102799061 coding downstream 587509 1468364 ~ 1478441 (+)
ccdc96 NA coding downstream 607629 1488484 ~ 1505654 (+)
trmt10a trmt10a coding downstream 627946 1508801 ~ 1519565 (+)
spata6l NA coding downstream 642141 1522996 ~ 1543886 (+)
rap1gds1 rap1gds1 coding downstream 701874 1582729 ~ 1620850 (+)
G140341 NA non-coding upstream 880 879100 ~ 879497 (+)
LOC120572243 NA non-coding upstream 46922 825988 ~ 833455 (+)
LOC120573673 NA non-coding upstream 79223 796708 ~ 801154 (+)
G140313 NA non-coding upstream 133487 746590 ~ 746890 (+)
G140309 NA non-coding upstream 220459 659708 ~ 659918 (+)
G140354 NA non-coding downstream 71400 952255 ~ 952469 (+)
G140359 NA non-coding downstream 130312 1011167 ~ 1012178 (+)
G140371 NA non-coding downstream 273397 1154252 ~ 1154979 (+)
G140376 NA non-coding downstream 440450 1321305 ~ 1370028 (+)
G140384 NA non-coding downstream 468200 1349055 ~ 1399665 (+)
LOC120572292 NA other upstream 257342 621116 ~ 623035 (+)
G140263 NA other upstream 544201 335882 ~ 336176 (+)
frem1a frem1,LOC106908230,LOC105925506,LOC101079287,LOC108244244 other downstream 796355 1677210 ~ 1725468 (+)
G140582 NA other downstream 1048768 1929623 ~ 2030627 (+)
G140594 NA other downstream 1141737 2022592 ~ 2032225 (+)
G140613 NA other downstream 1174584 2055439 ~ 2059367 (+)
ablim2 ablim2 other downstream 1947197 2828052 ~ 2954690 (+)

Expression


Co-expression Network