G140418 (grpel1,LOC102799061)


Basic Information

Item Value
gene id G140418
gene name grpel1,LOC102799061
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 1468232 ~ 1478813 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU189362
cgtggagataccGACCCTACGCCAGACCCTACgtcgtagcctgacgtgcacctctcgaaaaactTAACTACACGTGGCTCGGCCGTGTCCTGGTAGTGTTGCATTctcgttctcgcgatagtacggcacgttctcacgataacacgccacgtgtaGGTTTACAgccactgtatacagcgtagacattcacgtggatagctcaaaatgcgtacagataacacgccatttggctttaggaaagtagccgtgtatgtttacgcaaagtcatgatgtcatgttggactctagagtcgctactcactctgaagataatcaccatcactctctcaacCACATATTTAAAGACGtgtgaaagaaaaacattaaaccaAGCTGCTTTAATCAGTTTAATCTGATGCCGTGACGTAATTACCCCAATGGTTTACAGATAAGATGTGACATCACCGTCAGGCACCACTGAGCCAATTCGAAGCGTGAGAACCTTACAATTACCGACGCGGTCTTACCGGAGCCTGATCGCATCCAAAAATAAAcaaggaaaagatgttttttactCAGAAGGAACTCCGTACAAAGTGCAATTTTTCTTTAACTCCTCAAGTACGGTTCCCTGCTATATTCACAGAATGAAAACACAACTCACAAACAGGACAGGAGTCAAGTTATTATAACATTATTAGGGCTTTAGCAAAAGTCCGGAATGATCCCAGCAgttcagaatcagctttatggGGATGAATTTTACATCATAGCTCACCCAAAACATTAGAGGGGGTTTACGGTCActtgttttaactttttctgAAACATCATATTTCTCTTTCGTTAAGATTAACTGACTCTGACACTGAAATTCTATTGGAAGGACTGTGAGCCAGACAAAGCGTGTGTGTAAATGCGTCTGTTAAAAACTGGGTGGATACCGTCCGGATATAAAGTTCGGTTCAGTTGGGCTCCCGTCTCTTTTGAGCCTGGACCAGCGTGCTGGACCCGAGCTCGTCCAGCACTCAGGGCAACCGAGCTGATCCCGCTTGGTCACAGTCGCGTCAGCACTTCTAGGAGGCTTTGGCCACGCCCACCAATGCTGGCCTGAGGGTTCGACCGTGAAGCTTGTAGCCCACTTTGGTTACTACGGCGACGGTGCCGGGCTCCTTGCCCTCCACGGGGGCATGGAAGAGGGCCTCGTGCTCGTAGGGGTCAAACTTCTGCCCGTCGGGGTTGAGCTTGACCAGGCCATGCTTGGTGAAGACCTTCTGGATCTGGACCTCGGTCATCACCAGGCCGTCGTACAGGTTCTTCAGGTGGGGGTTCTGGCTCGTCACCTCCTCCTTGGGCACGCTCTCCGTGGCCTTCTCTAAGATGTCGGCCACTTCCAGCAGGTCCTTACAGAAGCCCTGGATCCCGTATAGTTTAGCATCTTCGATCATCTTCTGACTCCTGGTCCTGAGGTTCTCCGTGTCGGCTAAGGCCCTCTTGTACTTTTCCGTCATGTCTTTGAGCTGTTCCTCCAGCTGGGTCTCTGCTGCACTCTGCTCCGGCTTCTCAGCCTCCTCCTCTGACCCGTGGCCGTTCTTCTGCTGGGTGGCCGTGCATAACAATCGTGGAGACGCTCTTATCAGCGCTGGCGAAGATACAATTGAGTAGCTCTGTCTCACTGCCCGCACACACCAGCTCGCCATTTTTTCAGACTGTAACACACGCTGAACATGTATTGGAGGAGCGCTGAGGCACGAAGGGACGCACAATGATGACGGCAGGCGGCAGCGTACGGTCTGAGCCAATCAGGAGTCAGTAAGAAGACCACCTCTTCCATTTGACAAATCCGATTCAAAGAAGAGTTTGACGACAAGTTGTAGTTTGGTTGAGTTGACGTTAAAGGTGAAAGCTGCACGTGAC

Function

symbol description
grpel1 Predicted to enable adenyl-nucleotide exchange factor activity and unfolded protein binding activity. Predicted to be involved in protein import into mitochondrial matrix. Predicted to act upstream of or within protein folding. Predicted to be located in mitochondrion. Predicted to be part of PAM complex, Tim23 associated import motor. Orthologous to human GRPEL1 (GrpE like 1, mitochondrial).

NR:

description
PREDICTED: grpE protein homolog 1, mitochondrial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU189362 True 1896 lncRNA 0.50 4 1468232 1478813

Neighbor

gene id symbol gene type direction distance location
sorcs2 sorcs2 coding downstream 38515 1018258 ~ 1429717 (-)
LOC120573525 mrps28 coding downstream 554552 906545 ~ 913680 (-)
LOC120573590 NA coding downstream 861514 600634 ~ 606718 (-)
LOC120573587 NA coding downstream 1329995 135443 ~ 138237 (-)
LOC120573289 NA coding upstream 13461 1492274 ~ 1500316 (-)
slc1a1 slc1a1 coding upstream 71715 1550528 ~ 1574124 (-)
LOC120573508 LOC103361692 coding upstream 181324 1660137 ~ 1664945 (-)
aco1 aco1 coding upstream 270706 1749519 ~ 1774918 (-)
LOC120573473 NA coding upstream 405089 1883902 ~ 1885687 (-)
G140413 NA non-coding downstream 5367 1461638 ~ 1462865 (-)
G140404 NA non-coding downstream 148657 1290908 ~ 1319575 (-)
G140401 NA non-coding downstream 313290 1154243 ~ 1154942 (-)
G140400 NA non-coding downstream 313521 1116986 ~ 1154711 (-)
G140398 NA non-coding downstream 400326 1067457 ~ 1067906 (-)
G140437 NA non-coding upstream 2925 1481738 ~ 1482705 (-)
G140451 NA non-coding upstream 41008 1519821 ~ 1521839 (-)
G140454 NA non-coding upstream 51422 1530235 ~ 1530950 (-)
G140492 NA non-coding upstream 184208 1663021 ~ 1663252 (-)
G140514 LOC106908230,LOC105925506,LOC101079287,LOC100690429 non-coding upstream 241112 1719925 ~ 1725333 (-)
G140274 NA other downstream 1016562 443550 ~ 451670 (-)
tada2b tada2b other upstream 3976 1482789 ~ 1488426 (-)
tspan5a LOC100711712,LOC102299272,LOC102195201,LOC105938388,LOC103480072 other upstream 144446 1623259 ~ 1649432 (-)
LOC120573528 NA other upstream 448319 1927132 ~ 2032506 (-)
G140615 NA other upstream 572668 2051481 ~ 2058191 (-)
camk2d1 LOC100695450,LOC101472930 other upstream 975253 2454066 ~ 2573483 (-)

Expression


Co-expression Network