G140433


Basic Information

Item Value
gene id G140433
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 1519888 ~ 1521398 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU189379
GTAATAACTTAGTTGAACAGCTAATGGAAAGTTCAATTTTGCTACAACTATTAGCAGAATATATGTTATTAttacagaaaatgttttttttttccttttagcaAGAAGCTCAAGCTGTCAGCCTGGTGCTTAatctattcatttaaaaaaagttttaaagcaGGATAAAGTCCCAACATGAGCATTTTTGTCACTGGCCCTGGAATTCTTGGAAAAGATTAAACGTTTTGAGAGTATAGTCCCAATATAAGAAATGAAagctcctccacacagttgctagtagccaaggaggacacggaggattaaaaaaccatgacggactcttcagaagaagtCATTATCTTcagaaagtcgccggacgccccaatcttctgaacatagtcatactgagaaatccagagagagttgggtGGAGCTGATTGAATTCGATTTGATTCTGAAtaagctttgtagcaacttattaggcaatggcttgaatgtaacggatgttcattaatatcaaaaagttacacaccaAAGCTTTAACATGAATTTAACACATTCTATGTAGAAATTGGGGGAATATTCTACTGTAGATGAAAGTTGGAGGGTAGCTAAGGACAGCGgtaaacaaaagagaaaatgtgTTCAGCCAATGGAAAAAATAGTCGTTTCTAACTTCTGATTGGGTGGGCAGCctacagcccacctccacggtcGCCCACTGCCCCTCTTCGCATCCCGTTTAGGCACAAAGAGTTTGCAAGCAGCGGTCTGTTTCCTGGGTTAGGGTTGGAGTCCAATCCTAGACCTAACCAGATTAATCATGTTGCCCAGGGTTGCTTATGCCATGACAACTGTCTCTGTAGAAAATGAAGCAGAGCAGCGTGGCTTCAGTTGATCCTTTTCCTTTCCATATTAAGTCGTCTGATCATCAGCTGTCCACTCTGCAGCTAGAGTCCCAGCTAGggacaaacaaaacacagttaTAGAAATTTTAAGAGTGCAAATCTTCATTGTAATAGATGGATAgagtactttattaatcccaacaGGGCATatttgtgttgcagcagcaaacaagaagtaaaatacagaatataaactacaataaaaacagagaCTTGACTTAAATATGTGCTAAATATCCACACTGTGGTGCCCACTGTAGGACCAGACTCTGAATGGATACATGTATGGTACAGGCAGATATTATGTTGTCCTGTGTTGGTGACcaatcagaagaaaaaaaaaaagtgtgtgcgtACGTACATACGTTTCCTATcaaggcttttattgtgaaacattaGCACGGTTCCCATAATGGTGCATCAGATGCAGCTGCTGTCATCTTGTAGCACTGGTACGTCACTTCTGATTTACTAATAATTTATTCTTAGTTGGCACGCACATTCTTTATATCAAAGTTTATCAGACTTGTTTTCTGTTCTGTATCTGAAACTATGTTTATAcagtaaaataacagatttagAAGCAGCATCATGTTCAGAGAATTAAAATGCATTCTGACT

Function

GO:

id name namespace
GO:0035265 organ growth biological_process

KEGG:

id description
ko03008 Ribosome biogenesis in eukaryotes

RNA

RNA id representative length rna type GC content exon number start site end site
TU189379 True 1511 lncRNA 0.39 1 1519888 1521398

Neighbor

gene id symbol gene type direction distance location
trmt10a trmt10a coding upstream 323 1508801 ~ 1519565 (+)
ccdc96 NA coding upstream 14234 1488484 ~ 1505654 (+)
grpel1 grpel1,LOC102799061 coding upstream 41447 1468364 ~ 1478441 (+)
LOC120573524 NA coding upstream 629592 863318 ~ 890296 (+)
LOC120573671 LOC107990212,LOC107990219,LOC107990208 coding upstream 704679 812543 ~ 815209 (+)
spata6l NA coding downstream 1598 1522996 ~ 1543886 (+)
rap1gds1 rap1gds1 coding downstream 61331 1582729 ~ 1620850 (+)
paqr9 paqr9 coding downstream 217925 1739323 ~ 1742369 (+)
LOC120572142 NA coding downstream 517572 2038970 ~ 2102372 (+)
LOC120572444 NA coding downstream 688810 2210208 ~ 2210559 (+)
G140419 NA non-coding upstream 37216 1481701 ~ 1482672 (+)
G140392 NA non-coding upstream 83144 1436494 ~ 1436744 (+)
G140384 NA non-coding upstream 120223 1349055 ~ 1399665 (+)
G140376 NA non-coding upstream 149860 1321305 ~ 1370028 (+)
G140388 NA non-coding upstream 159224 1360323 ~ 1360664 (+)
G140435 NA non-coding downstream 2352 1523750 ~ 1524151 (+)
G140463 NA non-coding downstream 53191 1574589 ~ 1574860 (+)
G140516 NA non-coding downstream 209984 1731382 ~ 1788374 (+)
G140518 NA non-coding downstream 227449 1748847 ~ 1751285 (+)
G140537 NA non-coding downstream 271665 1793063 ~ 1793372 (+)
LOC120572292 NA other upstream 896853 621116 ~ 623035 (+)
G140263 NA other upstream 1183712 335882 ~ 336176 (+)
frem1a frem1,LOC106908230,LOC105925506,LOC101079287,LOC108244244 other downstream 155812 1677210 ~ 1725468 (+)
G140582 NA other downstream 408225 1929623 ~ 2030627 (+)
G140594 NA other downstream 501194 2022592 ~ 2032225 (+)
G140613 NA other downstream 534041 2055439 ~ 2059367 (+)
ablim2 ablim2 other downstream 1306654 2828052 ~ 2954690 (+)

Expression


Co-expression Network