G140536



Basic Information


Item Value
gene id G140536
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 1791040 ~ 1791662 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU189522
gtggaatgcagccatcagtaatggtttaataccagggtctctcctaagtggaatgcagccatcagtaatggtttaataccagggtatatcctaagtggaatgcagccatcagtaatggtttaataccatggtctctcctaagtggaatgcagccatcagtaatggtttaataccagggtctctcctaagtggaatgcagccatcattaatggtttaataccaggacctctcctaagtggaatgcagccatcattaatggtttaataccaggacctctcctaagtggaatgcagccatcattaatggtttaataccagggcctctcctaagtggaatgcagccatcattaatggtttaataccagggcctctcctaagtggaatgcagccatcattaatggtttaataccagggcctctcctaagtggaatgcagccatcattaatggtttaataccaggacctctcctaagtggaatgcagccatcattaatggtttaataccagggcctctcctaagtggaatgcagccatcattaatggtttaataccaggacctctcctaagtggaatgcagccatcagtaatggtttaataccagggtctctcctaagtggaatgcagc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU189522 True 623 lncRNA 0.44 1 1791040 1791662

Neighbor


gene id symbol gene type direction distance location
aco1 aco1 coding downstream 16122 1749519 ~ 1774918 (-)
LOC120573508 LOC103361692 coding downstream 126095 1660137 ~ 1664945 (-)
slc1a1 slc1a1 coding downstream 216916 1550528 ~ 1574124 (-)
LOC120573289 NA coding downstream 290724 1492274 ~ 1500316 (-)
sorcs2 sorcs2 coding downstream 361323 1018258 ~ 1429717 (-)
LOC120573473 NA coding upstream 92240 1883902 ~ 1885687 (-)
LOC120572242 NA coding upstream 227950 2019612 ~ 2022367 (-)
pde5ab pde5a coding upstream 887283 2678945 ~ 2797531 (-)
si:dkey-219e21.4 NA coding upstream 1020893 2812555 ~ 2818659 (-)
c14h4orf54 NA coding upstream 1325572 3117234 ~ 3128616 (-)
G140535 NA non-coding downstream 98 1790710 ~ 1790942 (-)
G140534 NA non-coding downstream 2951 1787304 ~ 1788089 (-)
LOC120573239 NA non-coding downstream 8444 1775837 ~ 1782596 (-)
G140514 LOC106908230,LOC105925506,LOC101079287,LOC100690429 non-coding downstream 65707 1719925 ~ 1725333 (-)
G140492 NA non-coding downstream 127788 1663021 ~ 1663252 (-)
G140548 NA non-coding upstream 20858 1812520 ~ 1839129 (-)
G140553 NA non-coding upstream 38150 1829812 ~ 1835425 (-)
G140559 NA non-coding upstream 42937 1834599 ~ 1882455 (-)
G140552 NA non-coding upstream 83696 1875358 ~ 1882805 (-)
G140572 NA non-coding upstream 101747 1893409 ~ 1893793 (-)
tspan5a LOC100711712,LOC102299272,LOC102195201,LOC105938388,LOC103480072 other downstream 141608 1623259 ~ 1649432 (-)
tada2b tada2b other downstream 302614 1482789 ~ 1488426 (-)
G140274 NA other downstream 1339370 443550 ~ 451670 (-)
LOC120573528 NA other upstream 135470 1927132 ~ 2032506 (-)
G140615 NA other upstream 259819 2051481 ~ 2058191 (-)
camk2d1 LOC100695450,LOC101472930 other upstream 662404 2454066 ~ 2573483 (-)
arsj arsj other upstream 806172 2597834 ~ 2622100 (-)
LOC120573530 NA other upstream 1347459 3139121 ~ 3143189 (-)

Expression



Co-expression Network