G140540


Basic Information

Item Value
gene id G140540
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 1817120 ~ 1839560 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU189526
acagacacacacacacacacacacagacacacacacacacacagagacacacacacacagacacacacacacacacacagacacacagacacacacagacacacacacacacagacacagacacacacacacacacacacacacacacacacacacacacacacacacatacacacacacacacacacacacacacacagacacacacacacacacacacacacacacacacacacacagacaaacacacacacacacagacacacacacacaaacacacacacacacacacacacacacagacacacacacacagatatacacagacacacacacacacacacacaaacacacacacacacacacacagacacacacacacacacacacacacacacagacacacaacacacacacacacacacccaacagacacacacacatacaacaacacacagacacaacacacacagacacacacagacacacacagacacacacacacacacagatatacacacacacacacacacagacacacacagacacacacacagacacacacacagacacacacagacacacacacacacacacacagacacacaacacacagacacacacacacacaacacacacacacacacacacacacagacacacacacacacacacacagacacacacagacacacacacacacacacacaaacacacacacacacacacacagacacacacacacacacacacagacacacacacacaaacacacacacacacacacacacacagacacacacacacacagacacacac
>TU189527
cgaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagacacacagacacacacacacacacacacacacacacagacacacagacacacacacacacacacagacacacacacagacacacacacacacagagacacacagacacacagacacacacacacacagacacacagacacacacacacacacacagacacacacacacacacacacacacacacacacacagagagacacacacacagacacacacacagacacacagacacacacacacacagacacacacacacacacagagacacacac
>TU189530
cgaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagacacacagacacacacacacacacacacacacacacagacacacagacacacacacacacacacagacacacacacagacacacacacacacagagacacacagacacacagacacacacacacacagacacacagacacacacacacacacacagacacacacacacacacacacacacacacacacacagagagacacacacacagacacacagacacacacacacacagacacacacacacacacacacagacacacacacacacacagagacacacagacacaaacacacacacacacagacacacagacacacacacacacacagacacacagacacacacacacacacacacacacacacatagagacacacacacagacacacagacacacacacacagacacacacacacacagacacagacacacacacacacacacacacacacacacacacacacacacacacacatacacacacacacacacacacacacacacagacacacacacacacacacacacacacacacacacacacagacaaacacacacacacacagacacacacacacaaacacacacacacacacacacacacacagacacacacacacagatatacacagacacacacacacacacacacagatatacacagacacacacacacacaca
>TU189534
cgaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagacacacagacacacacacacacacacacacacacacagacacacagacacacacacacacacacagacacacacacagacacacacacacacagagacacacagacacacagacacacacacacacagacacacagacacacacacacacacacagacacacacacacacacacacacacacacacacagacacaaacacacacacacacagacacacagacacacacacacacacagacacacagacacacacacacacacacacacacacacatagagacacacacacagacacacagacacacacacacacagacacacacacacacacagagacacacacacacacagacacacacacacacacagagacacacacacacagac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU189526 True 819 lncRNA 0.48 2 1817551 1839530
TU189527 False 339 lncRNA 0.50 2 1817120 1823441
TU189530 False 750 lncRNA 0.49 4 1817120 1839560
TU189534 False 455 lncRNA 0.50 3 1817120 1823605

Neighbor

gene id symbol gene type direction distance location
paqr9 paqr9 coding upstream 74751 1739323 ~ 1742369 (+)
rap1gds1 rap1gds1 coding upstream 196270 1582729 ~ 1620850 (+)
spata6l NA coding upstream 273234 1522996 ~ 1543886 (+)
trmt10a trmt10a coding upstream 297555 1508801 ~ 1519565 (+)
ccdc96 NA coding upstream 311466 1488484 ~ 1505654 (+)
LOC120572142 NA coding downstream 199410 2038970 ~ 2102372 (+)
LOC120572444 NA coding downstream 370648 2210208 ~ 2210559 (+)
ank2b ank2,LOC103361685,LOC107384730 coding downstream 439374 2278934 ~ 2450242 (+)
mad2l1 mad2l1,LOC102790739,LOC103155071,LOC106941438 coding downstream 825129 2664689 ~ 2669131 (+)
zcchc4 LOC104953644,LOC104953641 coding downstream 969340 2808900 ~ 2824015 (+)
G140538 NA non-coding upstream 20242 1796612 ~ 1796878 (+)
G140537 NA non-coding upstream 23748 1793063 ~ 1793372 (+)
G140516 NA non-coding upstream 28746 1731382 ~ 1788374 (+)
G140518 NA non-coding upstream 65835 1748847 ~ 1751285 (+)
G140463 NA non-coding upstream 242260 1574589 ~ 1574860 (+)
G140571 NA non-coding downstream 52579 1892139 ~ 1892363 (+)
G140578 NA non-coding downstream 63092 1902652 ~ 1984548 (+)
G140579 NA non-coding downstream 77724 1917284 ~ 1922297 (+)
G140584 NA non-coding downstream 92662 1932222 ~ 1937024 (+)
G140585 NA non-coding downstream 93668 1933228 ~ 1934982 (+)
frem1a frem1,LOC106908230,LOC105925506,LOC101079287,LOC108244244 other upstream 91652 1677210 ~ 1725468 (+)
LOC120572292 NA other upstream 1194085 621116 ~ 623035 (+)
G140263 NA other upstream 1480944 335882 ~ 336176 (+)
G140582 NA other downstream 90063 1929623 ~ 2030627 (+)
G140594 NA other downstream 183032 2022592 ~ 2032225 (+)
G140613 NA other downstream 215879 2055439 ~ 2059367 (+)
ablim2 ablim2 other downstream 988492 2828052 ~ 2954690 (+)
mllt3 mllt3 other downstream 1416953 3256513 ~ 3433803 (+)

Expression


Co-expression Network