G140548


Basic Information

Item Value
gene id G140548
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 1812520 ~ 1839129 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU189545
tgtgtgtgtgttgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtttgtgtgtgtgtgtgtgtgtgtctgtgtatatctgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgtgtgtgtgtctgtgtgtgtgtgtgtttgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctaaatgtgtgtgtgtgtgtgtg
>TU189546
gtctgtgtgtgtgtctctgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtctgtgtgtgtgtgtctgtgtgtgtgtctgtgtgtgtgtgtgtgtgtctgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttcgtggcGTCCTCTGGTCGTCCTGCTGTtcatcaaaaaataaaatcgaGTCATAAATCTGAACGAC
>TU189548
gtctgtgtgtgtgtctctgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtctgtgtgtctctgtgtgtgtgtgtgtctgtgtgtgtgtctgtgtgtgtgtgtgtgtgtctgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttcgtggcGTCCTCTGGTCGTCCTGCTGTtcatcaaaaaataaaatcgaGTCATAAATCTGAACGAC
>TU189551
tgtgtgtgtgttgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtttgtgtgtgtgtgtgtgtgtgtctgtgtatatctgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgtgtgtgtgtctgtgtgtgtgtgtgtttgtctgtgtgtgtgtgtctgtgtgtgtgtgtgtctgtgtgtgtgtctgtgtgtgtgtgtgtgtgtctgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttcgtggcGTCCTCTGGTCGTCCTGCTGTtcatcaaaaaataaaatcgaGTCATAAATCTGAACGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU189545 False 321 lncRNA 0.47 2 1812520 1839129
TU189546 False 272 lncRNA 0.49 2 1817057 1823447
TU189548 False 290 lncRNA 0.49 2 1817057 1823447
TU189551 True 416 lncRNA 0.48 2 1817057 1839129

Neighbor

gene id symbol gene type direction distance location
aco1 aco1 coding downstream 37602 1749519 ~ 1774918 (-)
LOC120573508 LOC103361692 coding downstream 147575 1660137 ~ 1664945 (-)
slc1a1 slc1a1 coding downstream 238396 1550528 ~ 1574124 (-)
LOC120573289 NA coding downstream 312204 1492274 ~ 1500316 (-)
sorcs2 sorcs2 coding downstream 382803 1018258 ~ 1429717 (-)
LOC120573473 NA coding upstream 44773 1883902 ~ 1885687 (-)
LOC120572242 NA coding upstream 180483 2019612 ~ 2022367 (-)
pde5ab pde5a coding upstream 839816 2678945 ~ 2797531 (-)
si:dkey-219e21.4 NA coding upstream 973426 2812555 ~ 2818659 (-)
c14h4orf54 NA coding upstream 1278105 3117234 ~ 3128616 (-)
G140536 NA non-coding downstream 20858 1791040 ~ 1791662 (-)
G140535 NA non-coding downstream 21578 1790710 ~ 1790942 (-)
G140534 NA non-coding downstream 24431 1787304 ~ 1788089 (-)
LOC120573239 NA non-coding downstream 29924 1775837 ~ 1782596 (-)
G140514 LOC106908230,LOC105925506,LOC101079287,LOC100690429 non-coding downstream 87187 1719925 ~ 1725333 (-)
G140552 NA non-coding upstream 36229 1875358 ~ 1882805 (-)
G140572 NA non-coding upstream 54280 1893409 ~ 1893793 (-)
G140597 NA non-coding upstream 61898 1901027 ~ 1905267 (-)
G140601 NA non-coding upstream 68116 1907245 ~ 1908644 (-)
LOC120572355 NA non-coding upstream 99338 1938467 ~ 1941368 (-)
tspan5a LOC100711712,LOC102299272,LOC102195201,LOC105938388,LOC103480072 other downstream 163088 1623259 ~ 1649432 (-)
tada2b tada2b other downstream 324094 1482789 ~ 1488426 (-)
G140274 NA other downstream 1360850 443550 ~ 451670 (-)
LOC120573528 NA other upstream 88003 1927132 ~ 2032506 (-)
G140615 NA other upstream 212352 2051481 ~ 2058191 (-)
camk2d1 LOC100695450,LOC101472930 other upstream 614937 2454066 ~ 2573483 (-)
arsj arsj other upstream 758705 2597834 ~ 2622100 (-)
LOC120573530 NA other upstream 1299992 3139121 ~ 3143189 (-)

Expression


Co-expression Network