G140586


Basic Information

Item Value
gene id G140586
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 1933298 ~ 1937648 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU189607
ctgcagctgtggttgttgttggggcagctgtggttgtcgttgctgcttctgtggttgttgttggggcagctgtggttgtcgttgctgcagctgtggttgtggttgctgcttctgttgttGTTAgggcagctgtggttgtcgttgctgcttctgtggttgttgtggcagctgtggttgtcgttgctgcagctgtgattgtcgttgctgcttctgtggt

Function

GO:

id name namespace
GO:0005886 plasma membrane cellular_component
GO:0071944 cell periphery cellular_component

KEGG:

id description
ko04514 Cell adhesion molecules
ko04670 Leukocyte transendothelial migration
ko05160 Hepatitis C

RNA

RNA id representative length rna type GC content exon number start site end site
TU189607 True 217 lncRNA 0.54 2 1933298 1937648

Neighbor

gene id symbol gene type direction distance location
paqr9 paqr9 coding upstream 190929 1739323 ~ 1742369 (+)
rap1gds1 rap1gds1 coding upstream 312448 1582729 ~ 1620850 (+)
spata6l NA coding upstream 389412 1522996 ~ 1543886 (+)
trmt10a trmt10a coding upstream 413733 1508801 ~ 1519565 (+)
ccdc96 NA coding upstream 427644 1488484 ~ 1505654 (+)
LOC120572142 NA coding downstream 101322 2038970 ~ 2102372 (+)
LOC120572444 NA coding downstream 272560 2210208 ~ 2210559 (+)
ank2b ank2,LOC103361685,LOC107384730 coding downstream 341286 2278934 ~ 2450242 (+)
mad2l1 mad2l1,LOC102790739,LOC103155071,LOC106941438 coding downstream 727041 2664689 ~ 2669131 (+)
zcchc4 LOC104953644,LOC104953641 coding downstream 871252 2808900 ~ 2824015 (+)
G140579 NA non-coding upstream 11001 1917284 ~ 1922297 (+)
G140571 NA non-coding upstream 40935 1892139 ~ 1892363 (+)
G140540 NA non-coding upstream 93738 1817120 ~ 1839560 (+)
G140538 NA non-coding upstream 136420 1796612 ~ 1796878 (+)
G140537 NA non-coding upstream 139926 1793063 ~ 1793372 (+)
G140587 NA non-coding downstream 201 1937849 ~ 2023883 (+)
G140608 NA non-coding downstream 123483 2061131 ~ 2070512 (+)
G140635 NA non-coding downstream 216716 2154364 ~ 2154765 (+)
G140640 NA non-coding downstream 228588 2166236 ~ 2214162 (+)
LOC120572447 NA non-coding downstream 357093 2294741 ~ 2295714 (+)
frem1a frem1,LOC106908230,LOC105925506,LOC101079287,LOC108244244 other upstream 207830 1677210 ~ 1725468 (+)
LOC120572292 NA other upstream 1310263 621116 ~ 623035 (+)
G140263 NA other upstream 1597122 335882 ~ 336176 (+)
G140594 NA other downstream 84944 2022592 ~ 2032225 (+)
G140613 NA other downstream 117791 2055439 ~ 2059367 (+)
ablim2 ablim2 other downstream 890404 2828052 ~ 2954690 (+)
mllt3 mllt3 other downstream 1318865 3256513 ~ 3433803 (+)
zgc:112271 LOC103361642,LOC104959592,LOC100706616,LOC104935668 other downstream 2375503 4313151 ~ 4315545 (+)

Expression


Co-expression Network