G140710 (LOC103361685)


Basic Information

Item Value
gene id G140710
gene name LOC103361685
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 2427912 ~ 2444596 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU189788
aaaaaaaaaaaactacagtatgtGCGATCTAAAAAATGCAATGAACAATAGCAGGATTAGATTACCAACACACTTCCACGGattaatagataaataaatgattttcaGAATCACACAGATTATGTAAAAGTCACATAATGGCAACCAAAGTAATGTGAAACCATATGAAAAGTCGCTGGGAGATGACGCTGACCTCTCTTTGGTCTCCCTCACTGTGCAGCACCGTTCTCTTCACCACTCTGGAGACAGAGTCCCCCTCCTCGATCTGCACGGTCTCCTGGTGAGAGCCCTCGATGGTCACTTCCTGTGTCTCCATGCCATCCGCTGACACGTATTTACGAATCACCTTCCGTGTGATCTTCTTAACTACCATGTTGCCATGCTCGTCTGTGTACTTCTCTTCTGTGACAGTCTGTGGTGGGATATCTGGTAGGTCATCTGCTTGTTTAAAACTGCCTGTGCGTACAGTGTCTGTCAGTTCCTCATATACTCTTTGTGATGAgTATGTTGTCTCCATCTCTTTTTGTAGTTTCTCTTTCTGGACATTTCTAAGAAGGCCTATTGCTGTGGAATCTGTCTCTGGCCGTCCCATTGTCTCGTGAAGTGATGACAAACTGGAGGACAGGTCCTCTGCTGACACCATGGGTACCTCTTGTCCCGAGCCTGGACTCCTACGTGCGGCCTCTGTACGCCTGACTGGACTGGGGCTGTCAATGTCTTCATGAAGGGCAGAGAAACCTGACAAAGAATACAGTGCAGGCACACAGAAAGACTTGATTGTTGAACTGTTTGGTATCTGAATGTCATAGGCAAGCAA
>TU189789
aaaaaaaaaaaactacagtatgtGCGATCTAAAAAATGCAATGAACAATAGCAGGATTAGATTACCAACACACTTCCACGGattaatagataaataaatgattttcaGAATCACACAGATTATGTAAAAGTCACATAATGGCAACCAAAGTAATGTGAAACCATATGAAAAGTCGCTGGGAGATGACGCTGACCTCTCTTTGGTCTCCCTCACTGTGCAGCACCGTTCTCTTCACCACTCTGGAGACAGAGTCCCCCTCCTCGATCTGCACGGTCTCCTGGTGAGAGCCCTCGATGGTCACTTCCTGTGTCTCCATGCCATCCGCTGACACGTATTTACGAATCACCTTCCGTGTGATCTTCTTAACTACCATGTTGCCATGCTCGTCTGTGTACTTCTCTTCTGTGACAGTCTGTGGTGGGATATCTGGTAGGTCATCTGCCTGTAAAAAGACCAAACACTATTGGCTCACATGCTACTACACAAAGGGGAACAACCAACAACATGTTATTTCCATCAGAGAAAGTATTTCAATTAACATATGATATAAATCACCCATACATGATCAACACCACCATATCTACAGTGTATGTTAAAGTCCCTTCAGGAATAATTTTCGATGCAATCATAGAATCTTTCCTCTGATGCCATacgtttcttttgttttttgtaaaataaagatGACAGAATCGGTGAAAATTGGTGTCTTGCAACCTACCAGTCTCTTTATTGACACTACCAATGGGAGGCgccaaagtaaaaaaacaaacattgtggGTTTATTAACAGAACAAAGAAATGATGTGGACATGAAAGAATTGAAAGCAGGTGCACAAACAAATGAACACAAACTTTCCTTTCTGCATTGCAGAATGTAACGTTTCTTACTTTTGTGACGAGCAAGTAGGGGACGTTCGGCATAAAATGATTAACCCAGTAAGTCAAGTCCAGCAACAAATATAAACCTAGCACCCCTACCCACCTAAACACAAACCCTGTGccactccacagtgctgcacaGCTGAATCATGCTCATTTACCTGAATGATAACTCTGCGTCGGACCACCCTGGTGGTCAGCACCTCCTCCTCTGAGCTATCAG

Function

NR:

description
PREDICTED: ankyrin-2-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU189788 False 817 lncRNA 0.46 4 2427912 2444596
TU189789 True 1102 lncRNA 0.42 2 2442768 2444596

Neighbor

gene id symbol gene type direction distance location
LOC120572242 NA coding downstream 405545 2019612 ~ 2022367 (-)
LOC120573473 NA coding downstream 542225 1883902 ~ 1885687 (-)
aco1 aco1 coding downstream 652994 1749519 ~ 1774918 (-)
LOC120573508 LOC103361692 coding downstream 762967 1660137 ~ 1664945 (-)
slc1a1 slc1a1 coding downstream 853788 1550528 ~ 1574124 (-)
pde5ab pde5a coding upstream 234349 2678945 ~ 2797531 (-)
si:dkey-219e21.4 NA coding upstream 367959 2812555 ~ 2818659 (-)
c14h4orf54 NA coding upstream 672638 3117234 ~ 3128616 (-)
focad focad coding upstream 722272 3166868 ~ 3252975 (-)
LOC120573709 H2AFZ,LOC100694115,LOC102297571,LOC102200939,LOC101065890 coding upstream 1010924 3455520 ~ 3457848 (-)
G140696 NA non-coding downstream 134077 2293629 ~ 2293835 (-)
G140695 NA non-coding downstream 148698 2278930 ~ 2279214 (-)
LOC120572446 NA non-coding downstream 151478 2276082 ~ 2276434 (-)
LOC120572445 NA non-coding downstream 151919 2275211 ~ 2275993 (-)
G140675 NA non-coding downstream 232238 2094367 ~ 2195674 (-)
G140747 NA non-coding upstream 228927 2673523 ~ 2676919 (-)
G140749 NA non-coding upstream 244158 2688754 ~ 2690247 (-)
G140750 NA non-coding upstream 245721 2690317 ~ 2691045 (-)
G140753 NA non-coding upstream 284685 2729281 ~ 2729619 (-)
G140761 NA non-coding upstream 378274 2822870 ~ 2824231 (-)
G140615 NA other downstream 369721 2051481 ~ 2058191 (-)
LOC120573528 NA other downstream 395406 1927132 ~ 2032506 (-)
tspan5a LOC100711712,LOC102299272,LOC102195201,LOC105938388,LOC103480072 other downstream 778480 1623259 ~ 1649432 (-)
tada2b tada2b other downstream 939486 1482789 ~ 1488426 (-)
G140274 NA other downstream 1976242 443550 ~ 451670 (-)
camk2d1 LOC100695450,LOC101472930 other upstream 9470 2454066 ~ 2573483 (-)
arsj arsj other upstream 153238 2597834 ~ 2622100 (-)
LOC120573530 NA other upstream 694525 3139121 ~ 3143189 (-)
G141003 NA other upstream 1710328 4154924 ~ 4155547 (-)
G141027 NA other upstream 1830055 4274651 ~ 4275274 (-)

Expression


Co-expression Network