G140740 (pde5a)


Basic Information

Item Value
gene id G140740
gene name pde5a
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 2710706 ~ 2725657 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU189819
GCCTGATGCTTCGTCCATCTTGTTCACCAACTGACATACAcCTATGACTTTGTCCTTCTTGCCATTTCTGATGGGAGTGCAGAGCAAACTCTTTATCTGGTTGCTGGTGTGATCTGGGTTTTCCCTTGTCCAAGGGAACCGTTGGTCCTTGGTGACGTCTGCAATGTTGAGAGGCTGCATGGTGTTTTTAACATACTGGGCGTACATGTAGTTAATCTGACTGACATCACAGTCCCTTTTGGGGGCGTCTAGGACTTCCCCCAGCTCTTCATATTCCATGT

Function

symbol description
pde5a Enables 3',5'-cyclic-GMP phosphodiesterase activity. Predicted to be involved in several processes, including positive regulation of MAP kinase activity; regulation of muscle system process; and relaxation of cardiac muscle. Predicted to act upstream of or within several processes, including cGMP catabolic process; negative regulation of T cell proliferation; and positive regulation of oocyte development. Predicted to be located in cytosol. Implicated in IgA glomerulonephritis.

NR:

description
PREDICTED: cGMP-specific 3',5'-cyclic phosphodiesterase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU189819 True 281 lncRNA 0.48 4 2710706 2725657

Neighbor

gene id symbol gene type direction distance location
mad2l1 mad2l1,LOC102790739,LOC103155071,LOC106941438 coding upstream 41575 2664689 ~ 2669131 (+)
ank2b ank2,LOC103361685,LOC107384730 coding upstream 260464 2278934 ~ 2450242 (+)
LOC120572444 NA coding upstream 500147 2210208 ~ 2210559 (+)
LOC120572142 NA coding upstream 608334 2038970 ~ 2102372 (+)
paqr9 paqr9 coding upstream 968337 1739323 ~ 1742369 (+)
zcchc4 LOC104953644,LOC104953641 coding downstream 83243 2808900 ~ 2824015 (+)
afap1 afap1 coding downstream 230691 2956348 ~ 3108934 (+)
hacd4 hacd4 coding downstream 431137 3156794 ~ 3167756 (+)
LOC120572274 NA coding downstream 736764 3462421 ~ 3470210 (+)
lrch4 lrch4 coding downstream 967381 3693038 ~ 3787295 (+)
G140738 NA non-coding upstream 25551 2684519 ~ 2685155 (+)
G140737 NA non-coding upstream 31643 2673366 ~ 2679063 (+)
G140729 NA non-coding upstream 48186 2662272 ~ 2662520 (+)
G140727 NA non-coding upstream 66276 2643948 ~ 2644430 (+)
G140718 NA non-coding upstream 119411 2590928 ~ 2591295 (+)
G140741 NA non-coding downstream 4117 2729774 ~ 2730107 (+)
G140746 NA non-coding downstream 71595 2797252 ~ 2797522 (+)
G140763 NA non-coding downstream 99017 2824674 ~ 2825867 (+)
G140770 NA non-coding downstream 383457 3109114 ~ 3112461 (+)
G140820 NA non-coding downstream 486986 3212643 ~ 3213025 (+)
G140613 NA other upstream 651339 2055439 ~ 2059367 (+)
G140594 NA other upstream 678481 2022592 ~ 2032225 (+)
G140582 NA other upstream 680079 1929623 ~ 2030627 (+)
frem1a frem1,LOC106908230,LOC105925506,LOC101079287,LOC108244244 other upstream 985238 1677210 ~ 1725468 (+)
LOC120572292 NA other upstream 2087671 621116 ~ 623035 (+)
ablim2 ablim2 other downstream 102395 2828052 ~ 2954690 (+)
mllt3 mllt3 other downstream 530856 3256513 ~ 3433803 (+)
zgc:112271 LOC103361642,LOC104959592,LOC100706616,LOC104935668 other downstream 1587494 4313151 ~ 4315545 (+)
G141060 men1 other downstream 1714981 4440638 ~ 4444947 (+)
G141063 NA other downstream 1758035 4483692 ~ 4487607 (+)

Expression


Co-expression Network