G140855


Basic Information

Item Value
gene id G140855
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 3280413 ~ 3433666 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU189980
TGTCctcaaaatacacaaaataacataaaacagaACACAGGGTAAGAAAGCCCTTCAAGGTTATTGGGACTGCTTACCATCCTGAActttaaaaatcaaacaaagGCATTCTCCTTGGGAAATGGATGCTGAGCTTTGCTTTAACAACTCAAACAcccacaaaataaataaaagacacccGTAACAGTACCTGTCAACCAAAATTCCCACTGGCTCTCTCTTTTGTTAAATGTAACCAAAATATTTCACACATTTCAGAAATGCAGAAGACAGAAGTCGTCTCTTTTCTGGTCTCATACTGCATGCAGGGACTTTGTTCTCCCTTTCCTCTTACAGGGCTTGGTCCGTTCTACAAAGAGAGAAGGATTTCCTTACAATCAGACTTTGTAGACAAACATTAGCAGTATCCTAAACCAACTGGATCTATTAACTATGCATTTGGCCCTGTAACTTTCTCCACGTTGCAGCCAATGAGCAGGACCTGCTGCAGTACATTAGTCCTGGATTTGGTACCAATGGGTTTTCGATTGTAGCATGAGAACTTTGACTTTAGTCATTTGTGCTCAGCTCACTCCAGCTGCCACTCAAGTCTTGCTTTATTACAGTGTCACAATATGGGAATAAAAAACTGCCAAAAGATGTTGCACTTGAAATTATGTGCTGGTGTGCTTCAATCTGTACAGCTGGAAAGCCAATCTCTTTCCTGCATGTGGAATACACATGATCACATTAGTCGGAGTTTGCGAGTTGTGTTTTATAATACATGCAATAATAGAAATACAAAATCTTTAAACGAGCTTCCTGTAAGAGGAGAAACCAAACGGTGGGGATTCAAAGCCACCATATGTAGAGTGTGTATGTCATGATAAAGTTTGCTTGTAGAAAAAGACATTTCAGTGAAAATTGTTGGTCAGATCCATGAGGCAGAGGGAGACAATAATAGCCGTAGAtaagtgttgttttttatacTACCACTGGGGGGCGCCAACATATAATTCTGCACAGAAGTAGTCACCAAAGATTTGTTTTTAAGCTCAAAATCAGATGGAGTCTTGCAAAGTTAGAGTAATGCCTGCACAATTTAGGCCTCAGTATGCTTCTTGGATGTCTAACAGTCTTCAACACACTCAGAATCTTTCTGAAACCGACAATCAGCCACTGTACCAGCCAGGCCATCGGTGCACAGGTGTGAACGGGAACAACAGGGGCTGTACAGCCGCACCAATGCCTCGGTTATCCCCCAGCCAGGCTGGATCTTTATCTGGACCTCAAGATTTGCTTCTTTTCTGGACTGGAATATAAATGTATGAGCGTCACCTTCACACCTGGTCTGGCAGTTTTTTGTTCCCATTGAAATTATTCAGTATTACATTCAGTAATGCTCAACTGTCACACAGAGTCAAATATATGCTGCTGTCAAgtgcttacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaca
>TU189982
TGTCctcaaaatacacaaaataacataaaacagaACACAGGGTAAGAAAGCCCTTCAAGGTTATTGGGACTGCTTACCATCCTGAActttaaaaatcaaacaaagGCATTCTCCTTGGGAAATGGATGCTGAGCTTTGCTTTAACAACTCAAACAcccacaaaataaataaaagacacccGTAACAGTACCTGTCAACCAAAATTCCCACTGGCTCTCTCTTTTGTTAAATGTAACCAAAATATTTCACACATTTCAGAAATGCAGAAGACAGAAGTCGTCTCTTTTCTGGTCTCATACTGCATGCAGGGACTTTGTTCTCCCTTTCCTCTTACAGGGCTTGGTCCGTTCTACAAAGAGAGAAGGATTTCCTTACAATCAGACTTTGTAGACAAACATTAGCAGTATCCTAAACCAACTGGATCTATTAACTATGCATTTGGCCCTGTAACTTTCTCCACGTTGCAGCCAATGAGCAGGACCTGCTGCAGTACATTAGTCCTGGATTTGGTACCAATGGGTTTTCGATTGTAGCATGAGAACTTTGACTTTAGTCATTTGTGCTCAGCTCACTCCAGCTGCCACTCAAGTCTTGCTTTATTACAGTGTCACAATATGGGAATAAAAAACTGCCAAAAGATGTTGCACTTGAAATTATGTGCTGGTGTGCTTCAATCTGTACAGCTGGAAAGCCAATCTCTTTCCTGCATGTGGAATACACATGATCACATTAGTCGGAGTTTGCGAGTTGTGTTTTATAATACATGCAATAATAGAAATACAAAATCTTTAAACGAGCTTCCTGTAAGAGGAGAAACCAAACGGTGGGGATTCAAAGCCACCATATGTAGAGTGTGTATGTCATGATAAAGTTTGCTTGTAGAAAAAGACATTTCAGTGAAAATTGTTGGTCAGATCCATGAGGCAGAGGGAGACAATAATAGCCGTAGAtaagtgttgttttttatacTACCACTGGGGGGCGCCAACATATAATTCTGCACAGAAGTAGTCACCAAAGATTTGTTTTTAAGCTCAAAATCAGATGGAGTCTTGCAAAGTTAGAGTAATGCCTGCACAATTTAGGCCTCAGTATGCTTCTTGGATGTCTAACAGTCTTCAACACACTCAGAATCTTTCTGAAACCGACAATCAGCCACTGTACCAGCCAGGCCATCGGTGCACAGGTGTGAACGGGAACAACAGGGGCTGTACAGCCGCACCAATGCCTCGGTTATCCCCCAGCCAGGCTGGATCTTTATCTGGACCTCAAGATTTGCTTCTTTTCTGGACTGGAATATAAATGTATGAGCGTCACCTTCACACCTGGTCTGGCAGTTTTTTGTTCCCATTGAAATTATTCAGTATTACATTCAGTAATGCTCAACTGTCACACAGAGTCAAATATATGCTGCTGTCAAgtgcttacacacacacacacacacacacacacacacacacacacacacacacacc

Function

GO: NA

KEGG:

id description
ko03010 Ribosome

RNA

RNA id representative length rna type GC content exon number start site end site
TU189980 True 1511 lncRNA 0.42 3 3280413 3433666
TU189982 False 1475 lncRNA 0.41 2 3419260 3433666

Neighbor

gene id symbol gene type direction distance location
focad focad coding downstream 27438 3166868 ~ 3252975 (-)
c14h4orf54 NA coding downstream 151797 3117234 ~ 3128616 (-)
si:dkey-219e21.4 NA coding downstream 461754 2812555 ~ 2818659 (-)
pde5ab pde5a coding downstream 482882 2678945 ~ 2797531 (-)
LOC120572242 NA coding downstream 1258046 2019612 ~ 2022367 (-)
LOC120573709 H2AFZ,LOC100694115,LOC102297571,LOC102200939,LOC101065890 coding upstream 21854 3455520 ~ 3457848 (-)
adam19a LOC108242304,LOC103148901 coding upstream 370320 3803986 ~ 4118384 (-)
ing2 ing2 coding upstream 822969 4256635 ~ 4259813 (-)
slx1b LOC103361641 coding upstream 868979 4302645 ~ 4312866 (-)
pygmb pygm,LOC106531364,LOC100706889,LOC107384765 coding upstream 898597 4332263 ~ 4351683 (-)
G140842 NA non-coding downstream 127077 3152899 ~ 3153336 (-)
LOC120572441 NA non-coding downstream 369788 2908630 ~ 2910625 (-)
G140762 NA non-coding downstream 455795 2824313 ~ 2824618 (-)
G140761 NA non-coding downstream 456182 2822870 ~ 2824231 (-)
G140753 NA non-coding downstream 550794 2729281 ~ 2729619 (-)
G140874 NA non-coding upstream 1394 3435060 ~ 3435360 (-)
G140875 NA non-coding upstream 2252 3435918 ~ 3436192 (-)
G140877 NA non-coding upstream 3719 3437385 ~ 3437606 (-)
G140878 NA non-coding upstream 4453 3438119 ~ 3438497 (-)
G140882 NA non-coding upstream 21349 3455015 ~ 3455366 (-)
LOC120573530 NA other downstream 137224 3139121 ~ 3143189 (-)
arsj arsj other downstream 658313 2597834 ~ 2622100 (-)
camk2d1 LOC100695450,LOC101472930 other downstream 706930 2454066 ~ 2573483 (-)
G140615 NA other downstream 1222222 2051481 ~ 2058191 (-)
LOC120573528 NA other downstream 1247907 1927132 ~ 2032506 (-)
G141003 NA other upstream 721258 4154924 ~ 4155547 (-)
G141027 NA other upstream 840985 4274651 ~ 4275274 (-)
LOC120573533 NA other upstream 888098 4321764 ~ 4332019 (-)
G141145 NA other upstream 1207829 4641495 ~ 4664198 (-)
G141159 taf6l other upstream 1226955 4660621 ~ 4661111 (-)

Expression


Co-expression Network