G141082 (LOC103359705)


Basic Information

Item Value
gene id G141082
gene name LOC103359705
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 4489993 ~ 4490601 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU190280
AATATACttataaaactaaataaataatgaagcCCTGTCTCTGGTGTAAGCCTGTTTCGACCACTGGCCTCTATCTGCAGCTTACCTTAATAAACACCACTATTTAAGAATTTACAGTTTGCAGTTGTACCGTAAGTAACAGTGGCTAAAAGCATCTCACCATCTTGAATGTGCGTGCCTTCACTAGAATAATCTTTGGTCCAGGCGGCGGCCATGGCTTCCCGCTCTTGCCGGCTCAGGGTGGTGGTCTCGGGGTGACATTCCTGGATGTGGCGGCGGAAGCTGCTGACTTTGATTTGGTGCAGGACCTGAGAACACACCATGCAGTACGTGCCCTGGCCCTGAGGCCCGTAGGCCACCAGGTAGTCGAGGCGGAGCCGCCACGGGTCGCCCCCGCGCAGCCGCCTCTTCCTGGGCTGGCGGAGGGGCGGAGGTCCCTGCTGCGCCGCTCCGACACCTCCATCCTCAGCGATGAGACAAGGGTCCTGAGTTAAAGTGCCGTCACCCTCCGGGTACAAGTCACTGTTGATCTGGATGGCCTCCACTTCCTGAGCAAAGAGGTCCGCCCCGCCTTCTTTGGTGTTGGGCTCTGATTTGATTGAGTTTTCT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU190280 True 609 lncRNA 0.55 1 4489993 4490601

Neighbor

gene id symbol gene type direction distance location
rtn3 LOC103359706,LOC108242286 coding upstream 10706 4447409 ~ 4479287 (+)
LOC120572661 NA coding upstream 190403 4286328 ~ 4299590 (+)
si:ch211-212k18.7 NA coding upstream 207322 4271925 ~ 4282671 (+)
LOC120572240 NA coding upstream 237151 4236291 ~ 4252842 (+)
rwdd rwdd4 coding upstream 279638 4205927 ~ 4210355 (+)
si:dkey-28a3.2 NA coding downstream 6847 4497448 ~ 4511964 (+)
eml3 eml3,LOC100700327,LOC101475149 coding downstream 38097 4528698 ~ 4594420 (+)
mta2 mta2 coding downstream 106431 4597032 ~ 4641652 (+)
cth1 LOC104936466,LOC104960793 coding downstream 155922 4646523 ~ 4649189 (+)
taf6l taf6l coding downstream 160287 4650888 ~ 4663367 (+)
G141080 NA non-coding upstream 1466 4488281 ~ 4488527 (+)
G141079 NA non-coding upstream 1999 4487740 ~ 4487994 (+)
G141052 NA non-coding upstream 121656 4366561 ~ 4368337 (+)
G141054 LOC103391650,LOC104940820 non-coding upstream 130535 4358921 ~ 4359458 (+)
G141045 pygm,pygmb,LOC103391662,LOC106531364 non-coding upstream 147687 4332302 ~ 4342306 (+)
G141084 NA non-coding downstream 2076 4492677 ~ 4493034 (+)
G141093 NA non-coding downstream 151104 4641705 ~ 4664198 (+)
G141169 NA non-coding downstream 288140 4778741 ~ 4826417 (+)
G141178 NA non-coding downstream 348806 4839407 ~ 4839638 (+)
G141166 NA non-coding downstream 361871 4852472 ~ 4855735 (+)
G141063 NA other upstream 2386 4483692 ~ 4487607 (+)
G141060 men1 other upstream 45046 4440638 ~ 4444947 (+)
zgc:112271 LOC103361642,LOC104959592,LOC100706616,LOC104935668 other upstream 174448 4313151 ~ 4315545 (+)
mllt3 mllt3 other upstream 1056190 3256513 ~ 3433803 (+)
ablim2 ablim2 other upstream 1535303 2828052 ~ 2954690 (+)
trnaw-cca_15 NA other downstream 1746402 6237003 ~ 6237074 (+)
drap1 drap1 other downstream 2081120 6571721 ~ 6578757 (+)
LOC120573071 map3k11 other downstream 2098350 6588951 ~ 6640245 (+)
LOC120573538 NA other downstream 3226003 7716604 ~ 7721656 (+)
LOC120572330 LOC107104736,LOC106920517,LOC103140598,LOC106947113 other downstream 3499597 7990198 ~ 7997708 (+)

Expression


Co-expression Network