G141159 (taf6l)


Basic Information

Item Value
gene id G141159
gene name taf6l
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 4660621 ~ 4661111 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU190380
gtttgcTGTACCTTCCTGACCCGGTAGCTGCCAGGCTGGGGGGGGGCGGATCGGTGCGTGGACTCCCGTCCTGTCGGGGGCTGATGTTGAGGTTGGCAGTCAGCTGAGGCATCTTTCGGGTGGTGTCAGGGTTGGAGGCAGGGCCGGGGGGTTCCTTCCTGGCGCCATCGGAATGGGCCAGGGCGCAGGGAGGGAAGCTGCCGAAGCCGGGCCCGGTACTGAACCGGACCGCCAGGCTGTCTCCGAAGAAGGAGTAGAGCTCGCAGTGGCTGGCGATTCCCAGGGCGGCCTCCGACAAAGGCTCAGGGGGGGGGCTGAGGCCAGGGGAGCTCACCCTGTAACCCATAGCCCCCCCCACAGAGCCCGGCTGACCCCCGGAGCCCCCCTCCGCTGgctgagacagagacagagcctTCATCTTCAGC

Function

symbol description
taf6l Predicted to enable transcription coactivator activity. Predicted to be involved in RNA polymerase II preinitiation complex assembly. Predicted to act upstream of or within transcription initiation from RNA polymerase II promoter. Predicted to be part of STAGA complex. Orthologous to human TAF6L (TATA-box binding protein associated factor 6 like).

NR:

description
PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU190380 True 425 TUCP 0.68 2 4660621 4661111

Neighbor

gene id symbol gene type direction distance location
ecsit NA coding downstream 132609 4518376 ~ 4528012 (-)
si:dkey-106g10.7 LOC103359705 coding downstream 162414 4486570 ~ 4498207 (-)
men1 men1 coding downstream 213271 4435605 ~ 4447350 (-)
map4k2 map4k2 coding downstream 226738 4381783 ~ 4433883 (-)
LOC120572314 LOC104952188 coding downstream 281107 4374190 ~ 4379514 (-)
sstr1b LOC104956125,LOC103370120,LOC106577512 coding upstream 377007 5038118 ~ 5084391 (-)
znf16l LOC103362116,LOC104940792,LOC101479721 coding upstream 453883 5114994 ~ 5119327 (-)
LOC120573313 acox3 coding upstream 552027 5213138 ~ 5244957 (-)
LOC120573316 acox3 coding upstream 658686 5319797 ~ 5335717 (-)
LOC120572332 NA coding upstream 757362 5418473 ~ 5423102 (-)
G141155 NA non-coding downstream 4289 4654164 ~ 4656332 (-)
G141123 NA non-coding downstream 134427 4514007 ~ 4526194 (-)
G141117 NA non-coding downstream 171117 4489300 ~ 4489504 (-)
G141115 NA non-coding downstream 174155 4485903 ~ 4486466 (-)
G141114 NA non-coding downstream 175839 4483738 ~ 4484782 (-)
G141193 NA non-coding upstream 66987 4728098 ~ 4730999 (-)
G141202 NA non-coding upstream 109861 4770972 ~ 4772477 (-)
G141207 NA non-coding upstream 173339 4834450 ~ 4834895 (-)
G141205 NA non-coding upstream 191347 4852458 ~ 4853807 (-)
G141212 NA non-coding upstream 274171 4935282 ~ 4935501 (-)
LOC120573533 NA other downstream 328602 4321764 ~ 4332019 (-)
G141027 NA other downstream 385347 4274651 ~ 4275274 (-)
G141003 NA other downstream 505074 4154924 ~ 4155547 (-)
LOC120573530 NA other downstream 1517432 3139121 ~ 3143189 (-)
arsj arsj other downstream 2038521 2597834 ~ 2622100 (-)
peli3 LOC100695529,LOC102800049,LOC102202559,LOC103148873,LOC106956141,LOC107098130,LOC103480122 other upstream 112517 4773628 ~ 4829162 (-)
G141219 NA other upstream 297568 4958679 ~ 4960005 (-)
G141234 NA other upstream 438594 5099705 ~ 5100082 (-)
nat16 nat16 other upstream 763450 5424561 ~ 5475155 (-)
cd99l2 cd99l2 other upstream 898915 5560026 ~ 5582995 (-)

Expression


Co-expression Network