G141683


Basic Information

Item Value
gene id G141683
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 6558298 ~ 6645212 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU191122
tgttacattttatttggtCTTATCTCTTTTTGagcttttcctttctttttgtttttccacagGTTAAAACAGTCAAGAGATAATAGTcaagagaaataaaaacatttttcacatactgtatacagaaATAGTCCTCTTgacacacaacaataacaacaagtTGATTAGGCCCAGCCCAGTGCGAGatttcacaaaaaaatgcaacaataacAAAATTTCCAAAGCCCGACGACCGCAAAAACCTCTAACTCGCGTGAGCACAGACCCTTCTGAGAGAGATGTAAAAATGGCTGCCAGGGCAATGCAACAATTATGTTATCACATCGCCTGGGTTGTAAATAAGACACAAAATAGACAATGGAAATGAATCTGGAACACTTACAATAAAAGCAAATCAAtacaaagacaaagaggagGTCAACCTCGTCTACTACTTAAGGTAGCGACGCAATCCTCATCTCTATCTAGCAGTTTTATGCACATACAAATTCAGTATGGGTGCCCCCAAGGAGACATTAGACTGAGATTTTAGGTTTGGGATTTTGCTGCAATGTACACACAAAAGAACCGGATTTCAAGCTCTATCAGGCAATTTTCTCCAAATGTTCTGCTACACACAAATACTGAGGCTTGTAGAGGAATCGTTTTGATGAAGAGATTTGGTCGAATTGAAGAACTGGAATGTAAAAGTGAATCCGCCCCATGTGAAGCACCCATACAAAACATCTTAAATACTCCAGTGAAAAGCTATACAACGTTTTGTTCGTATGAAGCAATCGATCCGTCATCCTAATGTAGACCGCGTCTATGGCCATCTCAAAAGAGAAATAGTTTTGATCCAGTGTGTAACAAGATGGCCATTTATAAATATCCCCTCCCCCCCGTGTAGAAGTTTTGTATATGTCCTTAGACTGGCTGGTAGGAAGGTCAGAAAGAAAAGCCTTTTACAGTACTGTGATGCTGTGAGTGGAAGAGATTGGACCACTGAGTCATGGGGACCGTTTCAAATTGCCTCTGTGGATCATTTAAGCCCATTCATGAGCACCTGAAAGAGACCACCTACTGTTAAATTACCCTCAAGCCTTAAGTCAAATATTTTACCCTGAATTATATCTGGGCCTTAGAAGACATTAATCCAGGCGATGATCTGACCCAGGACCATCGTACTACGCATCACGGTTCTAAACACCGATGTGTTAAACCATTGGCAGCACAAAGCCTTGGTTATACTCCCAAACAGACACGACACAGACGCATAAGTAGTTCTATTAATACTATTTTCCGGGGTCCTCTTGAAAGACGTGTTACACACGCGCGCAGTAGATCGCCTACGCTACCACTTTTAGTGTAAAGGCCGCACGGACAAGTCCAGACAGGTCGGCACAGTCACAACAAATTGGAGGTACGCAAATGTACGTACAGAACCTACGCGTACACCGTATGGTGACGAAATTTACGTCACGTGGACCCTAGCAGACCTTCGCAGATAGTATAATTTCAGCTTAAGCGCGTTGCTGTTTACTGAAttggaatgtttttttgtcagtttacaACCTGCCTTTCATTGGTTTGTCCGGTGAATTCTTCCCGACTCATGTCATTGGAATCTGAGTAACGATTCGTCTACACAGCGGCGGACAAAATCCATGCAGTTTTCCACATTTTAAACTTAGTGAACTTCGACGTGCAAATTCGTGCAATTTACTATTTTTAGCGTAGCTAACCTTTGAGAGAGCAGAGCTAACTTGGACTCTAGCTAATGGGGCTAGCTAGCAGCACAATGGCCGATTTCATCCAAATTGATTGAGGTATTCATAAGATATGTTACGAGAAGAAAATGCAAATACAAACTCATGGAATGGTAGGCAATATCCTTAGCATTTTTAAGGCGGGAAAACtaaagtgggggaaaaaatattgTTGAAGATGTAGTAACCGAATCAGCAAGCGTCCATGACGCCAACTAGGTTGCACTCACAGAACTAGCTCATGCACCCCGACACGTAGCATGACGTCGTATTATATCATCAGCTATTTCAGTCCTTTCATCTGCAAACAATGTGGACGAGACGACAATAAATCGTGCAGTCTCCATGTTTGAGACACCAGGGCTGTTTACTCAACCAATTCATTTAACACTCCAGCAACAGAAATGGACAGATTGAACGGCTTCTATTCCAGGAAGCACACAAGGTAATTGAGTGCCAATAGCGAGGCAGAACAATAATCACGGCCGTGGGGCTGTCGAGAAGGGGGCTTGGCTGAGTGTGTGGGTCTTGGACTTAATAACCTCATAGATAAAAATCCATGTTTATTTTGCTAAACAGAGCATCAGCCTTCTACAAGAGCCGTCACTGTGGTCTTGGAAACAAATTGGTGCTCCTTTTTCGTGGGCCCCCATTCATCCCGTTTTCAttgttacagattaaaaaaaaaaaaaaaaaaaaaaa

Function

NR:

description
PREDICTED: E3 ubiquitin-protein ligase TRIM39-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU191122 True 2450 lncRNA 0.42 2 6558298 6645212

Neighbor

gene id symbol gene type direction distance location
LOC120572494 LOC102208922,LOC107376753,LOC104965782,LOC101158483,LOC106907457,LOC103033313 coding downstream 11715 6514880 ~ 6546583 (-)
LOC120573666 NA coding downstream 68072 6456007 ~ 6490226 (-)
LOC120572244 NA coding downstream 105625 6451662 ~ 6452673 (-)
kiaa0232 kiaa0232 coding downstream 125700 6420533 ~ 6432598 (-)
LOC120573386 NA coding downstream 190522 6365971 ~ 6367776 (-)
LOC120573537 NA coding upstream 10744 6655956 ~ 6657450 (-)
nrxn2b nrxn2b,nrxn2,LOC106577539,LOC108427447,LOC102303057,LOC101464276,LOC102778344 coding upstream 80059 6725271 ~ 7395078 (-)
LOC120573565 NA coding upstream 1096020 7741232 ~ 7744036 (-)
cskmt mettl12 coding upstream 1102567 7747779 ~ 7749846 (-)
otub1b otub1,LOC102780151 coding upstream 1105096 7750308 ~ 7756854 (-)
G141667 NA non-coding downstream 46303 6455939 ~ 6511995 (-)
G141613 NA non-coding downstream 291715 6266151 ~ 6266583 (-)
G141612 NA non-coding downstream 292273 6265440 ~ 6266025 (-)
G141601 NA non-coding downstream 400885 6156052 ~ 6157413 (-)
G141470 NA non-coding downstream 566071 5989895 ~ 5992227 (-)
G141741 NA non-coding upstream 749947 7395159 ~ 7462473 (-)
G141773 NA non-coding upstream 873053 7518265 ~ 7518467 (-)
G141774 NA non-coding upstream 873297 7518509 ~ 7518757 (-)
G141778 NA non-coding upstream 876001 7521213 ~ 7521793 (-)
G141781 NA non-coding upstream 913600 7558812 ~ 7559174 (-)
tbc1d14 tbc1d14 other downstream 141841 6375972 ~ 6416457 (-)
LOC120572256 NA other downstream 187198 6353464 ~ 6371100 (-)
sox19b LOC104926817,LOC103365479,LOC100693580,LOC102199731,LOC101477749,LOC104962535 other downstream 242481 6308898 ~ 6315817 (-)
LOC120572220 NA other downstream 327001 6221971 ~ 6231297 (-)
gal3st4 gal3st4,LOC104939968 other downstream 338038 6177921 ~ 6220260 (-)
LOC120572295 rasgrp2,LOC104942268 other upstream 1003760 7648972 ~ 7703618 (-)
fcer1g NA other upstream 1136699 7781911 ~ 7787667 (-)
LOC120573451 NA other upstream 1195709 7840921 ~ 7937490 (-)
G141913 NA other upstream 1290018 7935230 ~ 7987441 (-)
LOC120572400 NA other upstream 1462435 8107647 ~ 8112684 (-)

Expression


Co-expression Network