G141741


Basic Information

Item Value
gene id G141741
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 7395159 ~ 7462473 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU191192
CCCAATTCCAATGGTTCGGCCCTGGTTTATTTGGCACGCGCAGCGGTGGTTTTAAAGATGACGCAAACTAATGCAAAGTTAAAAAATACGATAACGTTAGGCTAAACTATGAAGGAGGATGCAACAAGAGTTTGGAATTACCGGATATATTTGGTACAAGTGAACAGTAGGCTATAGAGTGCGTAACGTTCGGTGTTAACTGTCTAAATTGCTAGCTTAAACGTTAATTGTTTTGAAAGCGAAGCTCGAAGAACATGGCGTTTGCTAAAACGGAGCTGGGGAATACGAAGGTGCAGCACGTCAACCCGTGGTGATCCCCACCTGCCCCCCTAACGATGGGACCCATACTTGCGTGAAGCTTTGGAGTCCTTAAGTTCCAGGAGAAGAATGGATTTACGCTGAAACCATGAACGCATAGAATGCTCTAGCAGACCCCAGTAGACTCTGATACCCGTCTACTCTACGGCT

Function

GO:

id name namespace
GO:0007224 smoothened signaling pathway biological_process

KEGG:

id description
ko04340 Hedgehog signaling pathway

RNA

RNA id representative length rna type GC content exon number start site end site
TU191192 True 468 lncRNA 0.46 2 7395159 7462473

Neighbor

gene id symbol gene type direction distance location
nrxn2b nrxn2b,nrxn2,LOC106577539,LOC108427447,LOC102303057,LOC101464276,LOC102778344 coding downstream 81 6725271 ~ 7395078 (-)
LOC120573537 NA coding downstream 737709 6655956 ~ 6657450 (-)
c14h11orf68 clg18h11orf68,LOC104919665,LOC103366235,LOC104965781,LOC106907460,LOC102230372 coding downstream 825963 6566570 ~ 6569196 (-)
LOC120572494 LOC102208922,LOC107376753,LOC104965782,LOC101158483,LOC106907457,LOC103033313 coding downstream 848576 6514880 ~ 6546583 (-)
LOC120573666 NA coding downstream 904933 6456007 ~ 6490226 (-)
LOC120573565 NA coding upstream 278759 7741232 ~ 7744036 (-)
cskmt mettl12 coding upstream 285306 7747779 ~ 7749846 (-)
otub1b otub1,LOC102780151 coding upstream 287835 7750308 ~ 7756854 (-)
nectin4a NA coding upstream 295286 7757759 ~ 7780739 (-)
ndufs2 ndufs2 coding upstream 325428 7787901 ~ 7795793 (-)
G141683 NA non-coding downstream 749947 6558298 ~ 6645212 (-)
G141688 NA non-coding downstream 816404 6577177 ~ 6578755 (-)
G141667 NA non-coding downstream 883164 6455939 ~ 6511995 (-)
G141613 NA non-coding downstream 1128576 6266151 ~ 6266583 (-)
G141612 NA non-coding downstream 1129134 6265440 ~ 6266025 (-)
G141773 NA non-coding upstream 55792 7518265 ~ 7518467 (-)
G141774 NA non-coding upstream 56036 7518509 ~ 7518757 (-)
G141778 NA non-coding upstream 58740 7521213 ~ 7521793 (-)
G141781 NA non-coding upstream 96339 7558812 ~ 7559174 (-)
G141912 NA non-coding upstream 381632 7844105 ~ 7846084 (-)
tbc1d14 tbc1d14 other downstream 978702 6375972 ~ 6416457 (-)
LOC120572256 NA other downstream 1024059 6353464 ~ 6371100 (-)
sox19b LOC104926817,LOC103365479,LOC100693580,LOC102199731,LOC101477749,LOC104962535 other downstream 1079342 6308898 ~ 6315817 (-)
LOC120572220 NA other downstream 1163862 6221971 ~ 6231297 (-)
gal3st4 gal3st4,LOC104939968 other downstream 1174899 6177921 ~ 6220260 (-)
LOC120572295 rasgrp2,LOC104942268 other upstream 186499 7648972 ~ 7703618 (-)
fcer1g NA other upstream 319438 7781911 ~ 7787667 (-)
LOC120573451 NA other upstream 378448 7840921 ~ 7937490 (-)
G141913 NA other upstream 472757 7935230 ~ 7987441 (-)
LOC120572400 NA other upstream 645174 8107647 ~ 8112684 (-)

Expression


Co-expression Network