G141835


Basic Information

Item Value
gene id G141835
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 7750283 ~ 7783035 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU191306
CCTGAAGAAATAATGAGACAAGAAATAAGATGTAAATCCCTTTAATAAAACTCAATGAAACGCAGTGTAACAAAGGAAAAGAATCCAACATAAAGCAAGTAGATAACATTtacaaccacaaaaaaaaaaaaaaagaaaaaaaaacctgtacaACTCTAAATGCCTGGAGTCACTTCTATTTCttccaaagatttttttttattaaccatTTTGTGATGACTGAGGATAAACTTGGGAGTTTGGGACGAGAGGGGTAAGGGAGGCATGTCATGtgattttatcttttatttttaactttttttcaaatacataaGTGTGATCTCGTACACAGATGTATGCTTCATCAACGTTGCTGCtgaagttattttttatttattttttaaccccAGTGCTGTAGCGTACAGCGGGAGGAGAATGAGGCGGGCTGTGGCCAGGAGTGTTATTTGTACAAGATGTCGTAATGGCCAGGTCTATAGAGGAGGAAGATGCGTGGGTCGCCGCCTTCAGGGAAGACGTGGTGATTGactgttcctccctctcctctatCCATGTACTCCACCAGGATGGACACGTTCAGGGCCTGGGCCAATGCGATGATGTGGATGTGGTCACTTTCTTTAGACATGGGCTCTACctcctttataaaaaaaaaaaaaaaaaaaaaaaaaaaacttacagcAACAAGGGTAAGCATTTGTGAGATTGCCCATCTTGGGCACAACTTCTTTATTTGTGTGTCGTCCTTCTTAACTTCCCTTAAAAGCAAAAGGGAAATGAAAACTGGTGCACGCAATCTTACATTCTCTCAAAGTCTAATAAGCGAGGTTAGATAtgcaatatataaataaaataaaaagaggtatttaaccctctgaggacgaaaGATGCACCGTTGAGTCCAAACAATGTTTGACaaaactcctactcaaaaagcgatattacaaaaGTTCATTTCAGACATGTATTTACTACTTTAGTCATATATAACCTAAAGACTTTGGTGAACCCATTTCAAGCACCGAAACAATTCGTACAATACATCAtaagttaaggtttgttttcaaaagagatttgaggaatttcaaaaagccaacagcaatgtttcagctttagcgtcaaattatctctttacacattgctctgggAAAATATTTGGACATCactatacagaaagctgagttcgttctgaacatttttgatatgaaacacatggggatcagcAAATCCCCTTAAAAGGGGGAATGTAAGAAGATGTGTGAAAAtacccttagacctcagagggttaaaggaAAAGGTCTGTCTTGGATTCACTTCTTCATGCCAATAGTTTCATAAGTGTCCGCGGCGTGAGGAGTCAAACCCTGGAGGGAAAACAGGAAAATGAGAAATTC

Function

GO:

id name namespace
GO:0043254 regulation of protein-containing complex assembly biological_process
GO:0008154 actin polymerization or depolymerization biological_process
GO:1902903 regulation of supramolecular fiber organization biological_process
GO:0032956 regulation of actin cytoskeleton organization biological_process
GO:0007015 actin filament organization biological_process
GO:0032970 regulation of actin filament-based process biological_process
GO:0051258 protein polymerization biological_process
GO:0030832 regulation of actin filament length biological_process
GO:0030833 regulation of actin filament polymerization biological_process
GO:0030041 actin filament polymerization biological_process
GO:0110053 regulation of actin filament organization biological_process
GO:0008064 regulation of actin polymerization or depolymerization biological_process
GO:0032535 regulation of cellular component size biological_process
GO:0032271 regulation of protein polymerization biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU191306 True 1391 lncRNA 0.38 2 7750283 7783035

Neighbor

gene id symbol gene type direction distance location
LOC120572296 NA coding upstream 25669 7722209 ~ 7724614 (+)
alpk1 LOC102787108 coding upstream 34876 7704847 ~ 7715407 (+)
rela rela coding upstream 1183716 6549081 ~ 6566567 (+)
LOC120572493 LOC103366238 coding upstream 1214407 6492379 ~ 6535876 (+)
mpdu1b mpdu1 coding upstream 1462052 6280432 ~ 6288231 (+)
fxr2 fxr2 coding downstream 186982 7970017 ~ 7985215 (+)
LOC120573420 LOC104946620,LOC103361161 coding downstream 222738 8005773 ~ 8009869 (+)
LOC120572361 NA coding downstream 236201 8019236 ~ 8020881 (+)
LOC120573542 NA coding downstream 522950 8305985 ~ 8314768 (+)
LOC120572387 NA coding downstream 540740 8323775 ~ 8325576 (+)
G141830 NA non-coding upstream 25332 7724713 ~ 7724951 (+)
G141821 NA non-coding upstream 34010 7715904 ~ 7716273 (+)
G141780 NA non-coding upstream 191096 7558706 ~ 7559187 (+)
G141772 NA non-coding upstream 231580 7518333 ~ 7518703 (+)
LOC120573369 NA non-coding upstream 252951 7478498 ~ 7497332 (+)
G141857 NA non-coding downstream 57895 7840930 ~ 7937490 (+)
G141866 NA non-coding downstream 91371 7874406 ~ 7875940 (+)
G141869 dock11,LOC104947893 non-coding downstream 101787 7884822 ~ 7885647 (+)
G141871 dock11,LOC102309429,LOC101469146 non-coding downstream 112816 7895851 ~ 7896213 (+)
G141942 NA non-coding downstream 278024 8061059 ~ 8061293 (+)
LOC120573538 NA other upstream 28627 7716604 ~ 7721656 (+)
LOC120573071 map3k11 other upstream 1110038 6588951 ~ 6640245 (+)
drap1 drap1 other upstream 1171526 6571721 ~ 6578757 (+)
trnaw-cca_15 NA other upstream 1513209 6237003 ~ 6237074 (+)
G141063 NA other upstream 3262676 4483692 ~ 4487607 (+)
LOC120572330 LOC107104736,LOC106920517,LOC103140598,LOC106947113 other downstream 207163 7990198 ~ 7997708 (+)
LOC120572385 NA other downstream 274620 8057655 ~ 8060478 (+)
LOC120573547 NA other downstream 607780 8390815 ~ 8400539 (+)
LOC120573548 NA other downstream 629644 8412679 ~ 8413334 (+)
LOC120572397 NA other downstream 669898 8452933 ~ 8496546 (+)

Expression


Co-expression Network