LOC120573451


Basic Information

Item Value
gene id LOC120573451
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 7840921 ~ 7937490 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU191424
agccaatcagaggcagagtagGGCAGGTCTTTAGCGGCATGCAGAAAAGTTCATTTCATTTGTTAAACAGGAAAATTTAAAAGCAACAATTAAGTTACAATATAAACGGGCCTGACTCCgtttaaaaactggtttccggcaggttcctgttctgcagcaacATAGAACATTGAACACAATTTCGGCACACATTTTTACAGGACAATATCATGGACtagacaaatacaaacaaataaaacattaaatatggacaaacAAGACTAGAACAATACATGAACAATCAATGTGTGCAAGTGTGACTATCAAGAAGAAGTACTTTTATACTTCTCTACATCCATGTGTTCCCCCAGAGGTGCTGAAGCAAAACCTATTCAGAAacagaatttatttatttttctacaaCTTTTTTGGGGATAATTGAGTCATTGTTTTAGCATTAACCAAGctgttttttctctgtttttatatATCCATTTATTGTCTGTTGATCATTGATCATTGATCATTGATCATTTACTTGTAGAGCAAGTCGTTAGCTGTTGCTCTTTTCATGAAGGAGCCATTCTATAAAGGTGTGGCCTTCAGAGGACTTGAACGCTCGCACTACAAGTCCTCTGAAAACCACATGTGGTTTACAAAGAATTCCCCATAGCGTTGTTGCctgtttatttttatatcaGCTTGGACAAAAGCCAGGGGAACACCTGGCTCACCTGACCTCTAGCTTACCCAGTAAGAGCATGTTCCCCATGTAGGcggagtccttggcagcggcgcgggttggaatccgacctgctgccctctgctgcgtgtcaaaatgccccaaaaaataagctttaaaaacaaaaaagatattCATATTTAGCGTTGATACGCCTGTTTATAGAGCTGAAACTTGCATGGTCGGTTATGCATttgcacacagacatgcagtTCTATTGAATGTATTCTTCACCCGGGACAGTAGGCTGAAGCGCCTATCTGCTCTAACTGTTACCagcctctttctttctgtcgaGGGCTATGTGAAATGATAGAATCACTCCGGTAGAAATAGGTATCAATATTGTCGCTAAACAGCACAGCAAGAAGGTTAGATGCCTTTGTGCTGCTTTTGGATGGTTTATAAATCTAACGAAGTATATAAGTTTTGAATGCGAAATTTTAAAATCTGTATCTGTTTACATCACATATCAAGCATTCACTGTTGCTGATTTAGaggaacagtttgacatttgagAAGAAAACAAATGCTCATTCGCGTTCTTGCCACGGGTTAGATGATAAGAACTGATACCATTCTTAACATCTACATGGAAAATATGTCTAGTTGGAACCAGCAGTgcataaatactggaaacagctagtTTCCCTccaggaagaaaggaagaacatgtacctaccagcacctctaaaggaCTTTTCACTTTAGAATTTAAAACCCATTTTAATTGTAGAATTGCCTTTACTGTTACCACAGTATATCTTGTGTGTTTACTCTGTGAAAATAAAGTCACATTATGGTTTTAAGGGGGGATTTTGtaccagacttttttttttctgtaatccttCAAGTAAAAG
>XM_039823186.1
AAAATGAGGCAACCCGCCCATTTTCCAACCTCCAACAGTATTCATGCTTTCCTTCGAAGAGGCAGGAAGCAAAAGCAGATTAAAAGTCGGACATTTACTGTCCTACTTTGTAGACACCGTGGCGACAAGCTGACGCCACACGGCCGTCGTCAGGAGCGGGAATTATCCGAGCTAAACGTTTTACTCCTCACACACGAACGATGTGGAAAAAAGAAATTTAGGGATTGAGACTCAAACAGGATAAGCAGGATGTTTCAAAGTTTGGACTTGTTGACGTTAAGCTTCCTCCTAATAATGGTTAAATCCCAACAAGAGCTGGTGAAGGATGTGCAGTGCTACATCCATTCCGCTAATCAAGCTCACTGCTCCTGGGTCCCGTGCAGTCCTGCGCCAGATCTAAAGTTTTACTATCAGTTATGGAATGAGAGTTTCTCCGACCCTGTCGACTCACCTGTCTTACAGTGCTCAGAGTACCGTTACCCTGATGGGGTGAGGACTGGTTTTGATCTGAAGGCGAACATTTTCCAGTCCATCGTTATCTTGATAAATGGAACGCTCAACAACGCCATGAAACCCCTtgagaaaatttttttttcagagaatGTGAGGCCTCCTGCCCTTAATTGGACAGTCACTAAAACTGGGGATCAATTCCTTATCAGCTGGACTCCTCCTGACATCCCAGCGACCTGGACATATGTAATAAATTACACTGAGTGTAATGAATCAAAGACTAAagaggttgaaaaaaatgaaacatcCTTGGCCCTGGTCCCTCACTGTCCGTACAGTATTAAAATTAAAGCAACGTGTTCTGGAGGATGGACCCCATGGAGCGATGTGAAGTATTTTGATGTAGGAACCAGTCCTTGGGTGTATGCTGGCATTGTCGTCCCGTTGGTGTTCGCCGGCCTGGCAGTCctggtttttgtgtgtttcaggaAGAATAAGGAACGTATTTTTCCCAAAGTACCACAACCTCGGGACCTCATCAGCGATATTTATGACAACAACAATAAgAGCACTGTTTGCAACCTGTACATCCCGGCAAAGGAAGAAGACAACTGTAAAATCACTCTGGTGGAAGAGCCCCAAATCAACAAACTGGACTAACGTCACGTCTCTGAAGTGGCGACAGCTAAAAACGTCGCCCACCTTATTGTTGTGCTGGCTAAACAAAGGCATTGGGAGAGCTAACTGTTGAACTGATGAATGCAGGAGATGATTAGCCAAGTGTGTCAAGGGACACATCAACAAACAAACAGCGGTAGCTACTGCTTCCCTCTTCATTGTTCTCAAACTGATGTAGTTCAAAGTCCAACTTCACAAAGcttacttttaattatttttataccttttttaaTATAAAGTGCCATGTTAAAATGTTCTTGTTAATCAGTGTGCCATATCACCATTAAGCCTGCCATGGTCTATTGAGCCCGCTCGGGTagcgttattttttttttctttcagttcttGCGAAGAAgccaacgagtactagccaatcagagtagGGCAGGTCTTTAGCGGCATGCAGAAAAGTTCATTTCATTTGTTAAACAGGAAAATTTAAAAGCAACAATTAAGTTACAATATAAACGGGCCTGACTCCgtttaaaaactggtttccggcaggttcctgttctgcagcaacATAGAACATTGAACACAATTTCGGCACACATTTTTACAGGACAATATCATGGACtagacaaatacaaacaaataaaacattaaatatggacaaacAAGACTAGAACAATACATGAACAATCAATGTGTGCAAGTGTGACTATCAAGAAGAAGTACTTTTATACTTCTCTACATCCATGTGTTCCCCCAGAGGTGCTGAAGCAAAACCTATTCAGAAacagaatttatttatttttctacaaCTTTTTTGGGGATAATTGAGTCATTGTTTTAGCATTAACCAAGctgttttttctctgtttttatatATCCATTTATTGTCTGTTGATCATTGATCATTGATCATTGATCATTTACTTGTAGAGCAAGTCGTTAGCTGTTGCTCTTTTCATGAAGGAGCCATTCTATAAAGGTGTGGCCTTCAGAGGACTTGAACGCTCGCACTACAAGTCCTCTGAAAACCACATGTGGTTTACAAAGAATTCCCCATAGCGTTGTTGCctgtttatttttatatcaGCTTGGACAAAAGCCAGGGGAACACCTGGCTCACCTGACCTCTAGCTTACCCAGTAAGAGCATGTTCCCCATGTAGGcggagtccttggcagcggcgcgggttggaatccgacctgctgccctctgctgcgtgtcaaaatgccccaaaaaataagctttaaaaacaaaaaagatattCATATTTAGCGTTGATACGCCTGTTTATAGAGCTGAAACTTGCATGGTCGGTTATGCATttgcacacagacatgcagtTCTATTGAATGTATTCTTCACCCGGGACAGTAGGCTGAAGCGCCTATCTGCTCTAACTGTTACCagcctctttctttctgtcgaGGGCTATGTGAAATGATAGAATCACTCCGGTAGAAATAGGTATCAATATTGTCGCTAAACAGCACAGCAAGAAGGTTAGATGCCTTTGTGCTGCTTTTGGATGGTTTATAAATCTAACGAAGTATATAAGTTTTGAATGCGAAATTTTAAAATCTGTATCTGTTTACATCACATATCAAGCATTCACTGTTGCTGATTTAGaggaacagtttgacatttgagAAGAAAACAAATGCTCATTCGCGTTCTTGCCACGGGTTAGATGATAAGAACTGATACCATTCTTAACATCTACATGGAAAATATGTCTAGTTGGAACCAGCAGTgcataaatactggaaacagctagtTTCCCTccaggaagaaaggaagaacatgtacctaccagcacctctaaaggaCTTTTCACTTTAGAATTTAAAACCCATTTTAATTGTAGAATTGCCTTTACTGTTACCACAGTATATCTTGTGTGTTTACTCTGTGAAAATAAAGTCACATTATGGTTTTAAGGGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU191424 False 1581 lncRNA 0.39 2 7840921 7937490
XM_039823186.1 True 3028 mRNA 0.41 8 7840967 7859720

Neighbor

gene id symbol gene type direction distance location
trnar-ucu_15 NA coding downstream 3627 7837221 ~ 7837294 (-)
kirrel1a kirrel,LOC102307446,LOC102202990,LOC101467841,LOC102781300 coding downstream 5893 7797279 ~ 7835028 (-)
ndufs2 ndufs2 coding downstream 45128 7787901 ~ 7795793 (-)
nectin4a NA coding downstream 60182 7757759 ~ 7780739 (-)
otub1b otub1,LOC102780151 coding downstream 84067 7750308 ~ 7756854 (-)
haus4 haus4 coding upstream 26486 7963976 ~ 7968040 (-)
tifa NA coding upstream 62007 7999497 ~ 8000769 (-)
LOC120572390 NA coding upstream 127733 8065223 ~ 8067060 (-)
LOC120572369 NA coding upstream 138327 8075817 ~ 8079633 (-)
LOC120573539 NA coding upstream 162164 8099654 ~ 8102359 (-)
G141781 NA non-coding downstream 281747 7558812 ~ 7559174 (-)
G141778 NA non-coding downstream 319128 7521213 ~ 7521793 (-)
G141774 NA non-coding downstream 322164 7518509 ~ 7518757 (-)
G141773 NA non-coding downstream 322454 7518265 ~ 7518467 (-)
G141741 NA non-coding downstream 378448 7395159 ~ 7462473 (-)
G141920 LOC102310269,LOC102201257,LOC102782862 non-coding upstream 40384 7977874 ~ 7978789 (-)
G141932 LOC104946620,LOC103361161 non-coding upstream 68338 8005828 ~ 8009859 (-)
G141974 NA non-coding upstream 143374 8080864 ~ 8081655 (-)
LOC120572408 NA non-coding upstream 284349 8221839 ~ 8222181 (-)
G141995 NA non-coding upstream 290231 8227721 ~ 8228114 (-)
fcer1g NA other downstream 53254 7781911 ~ 7787667 (-)
LOC120572295 rasgrp2,LOC104942268 other downstream 137303 7648972 ~ 7703618 (-)
tbc1d14 tbc1d14 other downstream 1424464 6375972 ~ 6416457 (-)
LOC120572256 NA other downstream 1469821 6353464 ~ 6371100 (-)
sox19b LOC104926817,LOC103365479,LOC100693580,LOC102199731,LOC101477749,LOC104962535 other downstream 1525104 6308898 ~ 6315817 (-)
LOC120572400 NA other upstream 170157 8107647 ~ 8112684 (-)
LOC120573543 NA other upstream 394875 8332365 ~ 8335374 (-)
G142077 NA other upstream 527592 8465082 ~ 8465612 (-)
LOC120572370 NA other upstream 572903 8510393 ~ 8523919 (-)
LOC120572366 NA other upstream 579533 8517023 ~ 8543732 (-)

Expression


Co-expression Network