LOC120572412


Basic Information

Item Value
gene id LOC120572412
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 8069786 ~ 8073990 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU191472
ctgtctgctagtTGTTGTTGCTCCAGTTCTCCCTTCATTTCTGTTGGTTTAGTTTGGTTATGTTGTTTCAGTTTATTGTGACGAGAGGTCTTTCGAGAAGTTAGCTGTTAGGGCAAGTGCTGACACGTGacgtgttgttgtgtgtttgtgtggcgcTGATTAACCCTGGTATTGCAGCTGTGTGGGGGGGTGAGATTCATTCAGGACATGTCTCAGATGATTCATGTCTCAGGCAGTCGCGGAAACGGCACGCTGACGGCTGCAAACCAGACGCCTTCTACACAGAGAACACTATTGAAGACAAAGACGCTGACGGACTGTTCTTGTTCTCCTACCATACAAACTTTTGTAAATACAACTTTTGAAACCTAAAGTACAACAACGAGGAAGAGCGGGGGGCTGGACCGGGCGAGGGCCGCGACGGAGCACGCAGGGCAGTGTACTCTGGAGAGAAGGCGTGGCCACCGAAGCAAGCAGACCTCTTCAGACGCCAACACATGCAGTGTctggttgtcatttcagggtACGAgcaccaccctcctcctcccctgcttcTCCGGTCTTCGTCCCTCTCGGCTCCTGGGTCCTCTTCCAGCAGGCCTCTCCCAGCGGCCTTCAGCGTTGGTCTTTGGGCTCCTCACGCCACCATCGGTGtttagactccatcggggggttcaTACTTCGGCCCTacccctttttaaaagtttctcagaatttttaaattatggtggagtctaatctccaaagactgtactgtacatttcacgcACCTATACAATAAAT
>XR_005641445.1
GGGCTGGACCGGGCGAGGGCCGCGACGGAGCACGCAGGGCAGTGTACTCTGGAGAGAAGGCGTGGCCACCGAAGCAAGCAGACCTCTTCAGACGCCAACACATGCAGTGTctggttgtcatttcagggtACGAgcaccaccctcctcctcccctgcttcTCCGGTCTTCGTCCCTCTCGGCTCCTGGGTCCTCTTCCAGCAGGCCTCTCCCAGCGGCCTTCAGCGTTGGTCTTTGGGCTCCTCACGCCACCATCGGTGtttagactccatcggggggttcaTACTTCGGCCCTacccctttttaaaagtttctcagaatttttaaattatggtggagtctaatctccaaagactgtactgtacatttcacgcACCTATACAATAAATCATTACATATCTGcaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU191472 True 783 lncRNA 0.51 2 8069786 8073974
XR_005641445.1 False 403 lncRNA 0.55 2 8070182 8073990

Neighbor

gene id symbol gene type direction distance location
LOC120572361 NA coding upstream 48905 8019236 ~ 8020881 (+)
LOC120573420 LOC104946620,LOC103361161 coding upstream 59917 8005773 ~ 8009869 (+)
fxr2 fxr2 coding upstream 84571 7970017 ~ 7985215 (+)
LOC120572296 NA coding upstream 345172 7722209 ~ 7724614 (+)
alpk1 LOC102787108 coding upstream 354379 7704847 ~ 7715407 (+)
LOC120573542 NA coding downstream 231995 8305985 ~ 8314768 (+)
LOC120572387 NA coding downstream 249785 8323775 ~ 8325576 (+)
LOC120573544 NA coding downstream 294150 8368140 ~ 8370820 (+)
LOC120572377 NA coding downstream 332917 8406907 ~ 8408872 (+)
LOC120572394 NA coding downstream 371296 8445286 ~ 8447745 (+)
G141943 NA non-coding upstream 7925 8061399 ~ 8061861 (+)
G141942 NA non-coding upstream 8493 8061059 ~ 8061293 (+)
G141857 NA non-coding upstream 132296 7840930 ~ 7937490 (+)
LOC120572404 NA non-coding downstream 9448 8083438 ~ 8085320 (+)
G141967 NA non-coding downstream 124857 8198847 ~ 8199175 (+)
LOC120572410 NA non-coding downstream 394709 8468699 ~ 8469569 (+)
LOC120572409 NA non-coding downstream 402424 8476414 ~ 8476831 (+)
LOC120572403 NA non-coding downstream 578862 8652852 ~ 8689678 (+)
LOC120572385 NA other upstream 9308 8057655 ~ 8060478 (+)
LOC120572330 LOC107104736,LOC106920517,LOC103140598,LOC106947113 other upstream 72078 7990198 ~ 7997708 (+)
LOC120573538 NA other upstream 348130 7716604 ~ 7721656 (+)
LOC120573071 map3k11 other upstream 1429541 6588951 ~ 6640245 (+)
drap1 drap1 other upstream 1491029 6571721 ~ 6578757 (+)
LOC120573547 NA other downstream 316825 8390815 ~ 8400539 (+)
LOC120573548 NA other downstream 338689 8412679 ~ 8413334 (+)
LOC120572397 NA other downstream 378943 8452933 ~ 8496546 (+)
LOC120572401 NA other downstream 540300 8614290 ~ 8616191 (+)
LOC120572381 NA other downstream 672630 8746620 ~ 8748900 (+)

Expression


Co-expression Network