LOC120572401


Basic Information

Item Value
gene id LOC120572401
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 8614290 ~ 8616191 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU191598
AGATGAGGTGGACTCTCCTGTCTGGGTTTATTTATTGAGTGCAGCTTTAGCATTCACCACCATCCTGAGTGTTTTGCTGGCTTTCTCAGTGTACAAGGTGAACAAAAGAAGCTGCCAATGTACAGCGACTTCTACTCCCAACATAGCGTTACGCGAAGACGCAGACAACCTTCATTACGCTGCTTTAAGGGATCACAGCGGCAACACATCAAGAAGACAGAGGGACAGCACCATGACTGAATGCGTGTACTCCAGTGTAAAGCAGTAGAGCTGGACACGTGTCTGTACTTTGTTTCTGTGTACCAAGACATTTGACAAAAGGGTCATTTGAATTTTCCCGAAACTTTAAAGCTTATGATTTCAgcaaattaaataattataaagCCTTGCCTTGAAAAAGCTCAGCTCTtccactgaaaaaaatgaaaataaaacac
>XM_039821705.1
TGGGGGGGGGCCAATGAACTTGTGTTCACTGTTTCCAAATCTAATTGGCCAATCAAACACCGCCTTCTCTGTGAAGAGTGGAGAACGTACAGAGTTCAAGTCATTCCGCACAGCATTTGAAGCACGATGACACCTCCGAACTTTGCTTTGTATTTCACATGTCTGTTCGTGGCGAATATGGCACTGACAACTTCCAAACCATCTTCATTACATTTTTACTCACCTAATGCTGGGGAAAGTGTGAATTTGTCATGCGTCTGTGACAATGATGCAATGGCAGTGATGTATCACTGGTATAAGCAAACTCTGGGACAGAAACCAAAGCTGATGTCTACATTCTATAGGCATAACGATATTGGAACCTTTCAAGATGAATTCAACAACAGTACACGCTTCTCACTGGCCAAAGTAAAGGATAAATATCACTTGAAGATTTCAGATCTGCAAATTTCAGACTCAGCGACTTACTACTGCGTTGGGAGCAACTTATATGACTTTGAATTTTGTGAGGGTACTACAGTCAGCGTAAAAGGTTCAGGTTTAAACGTCCCAGCTACGGTCCATCAGTCTTCATCTGAGAGCATCCAGCCAGGAGGCTCTGTGACTCTCAACTGTACAGTACACACTGGGACCTGTGATGGAGAACACAGTGTTTACTGGTTCAAGAACTCTGAAGAATCTCAGCCAGGACTCATTTACACCCATGGAGGCAGGACTGATCAGTGTGAGAGGAaacccaacacacaaacacacacctgtgtcTACAACCTGCCGATGAAGAGTCTGAATCTTTCTCATGAGACTTACTACTGTGCGGTTGCCTCATGTGGACACATTCTGTTTGGACACAGGACCAAGCTGGACTTAGAAGATGAGGTGGACTCTCCTGTCTGGGTTTATTTATTGAGTGCAGCTTTAGCATTCACCACCATCCTGAGTGTTTTGCTGGCTTTCTCAGTGTACAAGGTGAACAAAAGAAGCTGCCAATGTACAGAATGTAATGTCACATTTTCAGCGACTTCTACTCCCAACATAGCGTTACGCGAAGACGCAGACAACCTTCATTACGCTGCTTTAAGGGATCACAGCGGCAACACATCAAGAAGACAGAGGGACAGCACCATGACTGAATGCGTGTACTCCAGTGTAAAGCAGTAGAGCTGGACACGTGTCTGTACTTTGTTTCTGTGTACCAAGACATTTGACAAAAGGGTCATTTGAATTTTCCCGAAACTTTAAAGCTTATGATTTCAgcaaattaaataattataaagCCTTGCCTTGAAAAAGCTCAGCTCTtccactgaaaaaaatgaaaataaaacacttgTCTTCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU191598 False 437 lncRNA 0.42 3 8615528 8616180
XM_039821705.1 True 1338 mRNA 0.43 5 8614290 8616191

Neighbor

gene id symbol gene type direction distance location
LOC120572362 NA coding upstream 3091 8606965 ~ 8611199 (+)
LOC120573551 NA coding upstream 42799 8570078 ~ 8571491 (+)
LOC120572388 NA coding upstream 112070 8497257 ~ 8502220 (+)
LOC120572394 NA coding upstream 166545 8445286 ~ 8447745 (+)
LOC120572377 NA coding upstream 205418 8406907 ~ 8408872 (+)
LOC120572378 NA coding downstream 16589 8632780 ~ 8636310 (+)
LOC120572371 NA coding downstream 33033 8649224 ~ 8651266 (+)
LOC120572373 NA coding downstream 43542 8659733 ~ 8662405 (+)
LOC120572399 NA coding downstream 49311 8665502 ~ 8675307 (+)
LOC120572398 NA coding downstream 69158 8685349 ~ 8687215 (+)
LOC120572409 NA non-coding upstream 137459 8476414 ~ 8476831 (+)
LOC120572410 NA non-coding upstream 144721 8468699 ~ 8469569 (+)
G141967 NA non-coding upstream 415115 8198847 ~ 8199175 (+)
LOC120572404 NA non-coding upstream 528970 8083438 ~ 8085320 (+)
LOC120572412 NA non-coding upstream 540300 8069786 ~ 8073990 (+)
LOC120572403 NA non-coding downstream 36661 8652852 ~ 8689678 (+)
G142057 NA non-coding downstream 139039 8755230 ~ 8755493 (+)
G142156 NA non-coding downstream 375732 8991923 ~ 9005284 (+)
G142161 NA non-coding downstream 400807 9016998 ~ 9017210 (+)
G142203 NA non-coding downstream 581346 9197537 ~ 9203445 (+)
LOC120572397 NA other upstream 117744 8452933 ~ 8496546 (+)
LOC120573548 NA other upstream 200956 8412679 ~ 8413334 (+)
LOC120573547 NA other upstream 213751 8390815 ~ 8400539 (+)
LOC120572385 NA other upstream 553812 8057655 ~ 8060478 (+)
LOC120572330 LOC107104736,LOC106920517,LOC103140598,LOC106947113 other upstream 616582 7990198 ~ 7997708 (+)
LOC120572381 NA other downstream 130429 8746620 ~ 8748900 (+)
tmem88b tmem88,LOC104964151,LOC103375639,LOC102237254 other downstream 1898046 10514237 ~ 10523748 (+)
LOC120573689 NA other downstream 2082093 10698284 ~ 10705325 (+)
zgc:101765 LOC104948199,LOC103360918 other downstream 2551215 11167406 ~ 11177041 (+)
LOC120573186 LOC108242886 other downstream 2588451 11204642 ~ 11308298 (+)

Expression


Co-expression Network