LOC120572403


Basic Information

Item Value
gene id LOC120572403
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 8652852 ~ 8689678 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU191602
GATTTAAAGACTGAACAGGAGTCTGATGGAATAATTGTGATCTTGGGTGTTCTGACTGTTTTCTTCATGATAGCTGTCATTGTTCTGTCTGTTAAAAACAGGAAACTTCAGAAAGCTGCTAAAGAAGAACTGCATCCTGAAAGAAACAAGAATGTGGGCTCTGATGATCTGAACTCTGCAGCTCTGAGGTTCCTTCCAAACACAATAAGGAACAGGAGGCCTGATCAGAGAGAGAAGTGGAGACTCAGGTTCTTTATAGCGCCAGCAGATAGACACAAGCAGCAATAGGACTGTAACTCTCACTGGAACTGATGCTCTATATTCATCTGCTGCCAGAGTCAATggcaacattcttttattaaataaagttcCTATACTCATGGT
>XR_005641435.1
GGTAAGGTTCTCCTTTTTCACTGTGCAAGTGTCCACAGAGCCATTCATTTCAATCTCAAACATCTCTTTTAAAACAGACTCTAATTCTGTCTTTTCTCTTGTAGAGGAGTCTGATGGAATAATTGTGATCTTGGGTGTTCTGACTGTTTTCTTCATGATAGCTGTCATTGTTCTGTCTGTTAAAAACAGGAAACTTCAGAAAGCTGCTAAAGAAGAACTGCATCCTGAAAGAAACAAGAATGTGGGCTCTGATGATCTGAACTCTGCAGCTCTGAGGTTCCTTCCAAACACAATAAGGAACAGGAGGCCTGATCAGAGAGAGAAGTGGAGACTCAGGTTCTTTATAGCGCCAGCAGATAGACACAAGCAGCAATAGGACTGTAACTCTCACTGGAACTGATGCTCTATATTCATCTGCTGCCAGAGTCAATggcaacattcttttattaaataaagttcCTATACTCATGGTCa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU191602 False 384 lncRNA 0.41 4 8652852 8689676
XR_005641435.1 True 474 lncRNA 0.41 3 8688967 8689678

Neighbor

gene id symbol gene type direction distance location
LOC120572371 NA coding upstream 1586 8649224 ~ 8651266 (+)
LOC120572378 NA coding upstream 16542 8632780 ~ 8636310 (+)
LOC120572362 NA coding upstream 41653 8606965 ~ 8611199 (+)
LOC120573551 NA coding upstream 81361 8570078 ~ 8571491 (+)
LOC120572388 NA coding upstream 150632 8497257 ~ 8502220 (+)
LOC120572374 NA coding downstream 15972 8705650 ~ 8707397 (+)
LOC120572391 NA coding downstream 25463 8715141 ~ 8721447 (+)
LOC120572389 NA coding downstream 34952 8724630 ~ 8726984 (+)
LOC120572395 NA coding downstream 76326 8766004 ~ 8767808 (+)
LOC120573553 NA coding downstream 84014 8773692 ~ 8774605 (+)
LOC120572409 NA non-coding upstream 176021 8476414 ~ 8476831 (+)
LOC120572410 NA non-coding upstream 183283 8468699 ~ 8469569 (+)
G141967 NA non-coding upstream 453677 8198847 ~ 8199175 (+)
LOC120572404 NA non-coding upstream 567532 8083438 ~ 8085320 (+)
LOC120572412 NA non-coding upstream 578862 8069786 ~ 8073990 (+)
G142057 NA non-coding downstream 65552 8755230 ~ 8755493 (+)
G142156 NA non-coding downstream 302245 8991923 ~ 9005284 (+)
G142161 NA non-coding downstream 327320 9016998 ~ 9017210 (+)
G142203 NA non-coding downstream 507859 9197537 ~ 9203445 (+)
G142206 NA non-coding downstream 536629 9226307 ~ 9226543 (+)
LOC120572401 NA other upstream 36661 8614290 ~ 8616191 (+)
LOC120572397 NA other upstream 156306 8452933 ~ 8496546 (+)
LOC120573548 NA other upstream 239518 8412679 ~ 8413334 (+)
LOC120573547 NA other upstream 252313 8390815 ~ 8400539 (+)
LOC120572385 NA other upstream 592374 8057655 ~ 8060478 (+)
LOC120572381 NA other downstream 56942 8746620 ~ 8748900 (+)
tmem88b tmem88,LOC104964151,LOC103375639,LOC102237254 other downstream 1824559 10514237 ~ 10523748 (+)
LOC120573689 NA other downstream 2008606 10698284 ~ 10705325 (+)
zgc:101765 LOC104948199,LOC103360918 other downstream 2477728 11167406 ~ 11177041 (+)
LOC120573186 LOC108242886 other downstream 2514964 11204642 ~ 11308298 (+)

Expression


Co-expression Network