LOC120572381


Basic Information

Item Value
gene id LOC120572381
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 8746620 ~ 8748900 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU191613
CACACTGAGACTGTGGAGGGTCGGCCGGGTGGAGAAGTCACACTCACATGCTCTAACCCGTCCAACCGAGACGCTGCAACACTCTGGTTTAGAGTGGTCAACAGAACCAAGGCCAGCTGGATCTCCATGATGACCAGCTCTACAGTAAAACCTTTTTACAGTGATGGATTTCAAAATGGAAGATTCAACATGAGTACCAAC
>XM_039821679.1
ACGATGAAACGGAGCCTGATAACAGCTTTAATTCTCTGCAGCATCAgcTGGATCTCTGTCTCAGGTTCTGAGTCTCACACTGAGACTGTGGAGGGTCGGCCGGGTGGAGAAGTCACACTCACATGCTCTAACCCGTCCAACCGAGACGCTGCAACACTCTGGTTTAGAGTGGTCAACAGAACCAAGGCCAGCTGGATCTCCATGATGACCAGCTCTACAGTAAAACCTTTTTACAGTGATGGATTTCAAAATGGAAGATTCAACATGAGTACCAACATCTCCACTCTCTTTCTCCAAATCAAACATGTGGATGTATCTGACTCTGGACTGTATTTCTGTGGATTTTACATCGGAGGACCTTTTAATTTCAGTGCAATACACTTCATTGTTAATGGCAGCGATGAATCTCATGATGACAACGACGACAGGAAGTGTGAAACAGAGTCTGATGGAACAGCAAAGCTGATGAGTTTGATCCTGGGAGCTCTGACTGTTCTCCTCTTATTGGTCATCATTGGTCTGGTTGTTAAAAACCAGAAACTTCAGAAAGCTGCCAATGAAGAACAGAATCCACAACAGCCTGAGAACCGGGCCTCTGAAGAGCTGAACTACGCAGCTGTGGCTTTCCGtccaaaaacaagaaaaacaagagaAGTGGAGCCCAATGTTGTGTATGCTTCTACTAGATAGACTCAGGATGAAACCAGAGAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU191613 False 201 lncRNA 0.49 1 8746815 8747015
XM_039821679.1 True 712 mRNA 0.45 6 8746620 8748900

Neighbor

gene id symbol gene type direction distance location
LOC120572389 NA coding upstream 19636 8724630 ~ 8726984 (+)
LOC120572391 NA coding upstream 25173 8715141 ~ 8721447 (+)
LOC120572374 NA coding upstream 39223 8705650 ~ 8707397 (+)
LOC120572398 NA coding upstream 59405 8685349 ~ 8687215 (+)
LOC120572399 NA coding upstream 71313 8665502 ~ 8675307 (+)
LOC120572395 NA coding downstream 17104 8766004 ~ 8767808 (+)
LOC120573553 NA coding downstream 24792 8773692 ~ 8774605 (+)
LOC120572425 ptgdr2 coding downstream 134344 8883244 ~ 8985161 (+)
si:dkey-112a7.4 LOC108247708,LOC102218994,LOC103480589,LOC105919014 coding downstream 354843 9103743 ~ 9109420 (+)
nlgn2a nlgn2b,nlgn2,LOC103358392,LOC103480578 coding downstream 737273 9486173 ~ 9688619 (+)
LOC120572403 NA non-coding upstream 56942 8652852 ~ 8689678 (+)
LOC120572409 NA non-coding upstream 269789 8476414 ~ 8476831 (+)
LOC120572410 NA non-coding upstream 277051 8468699 ~ 8469569 (+)
G141967 NA non-coding upstream 547445 8198847 ~ 8199175 (+)
LOC120572404 NA non-coding upstream 661300 8083438 ~ 8085320 (+)
G142057 NA non-coding downstream 6330 8755230 ~ 8755493 (+)
G142156 NA non-coding downstream 243023 8991923 ~ 9005284 (+)
G142161 NA non-coding downstream 268098 9016998 ~ 9017210 (+)
G142203 NA non-coding downstream 448637 9197537 ~ 9203445 (+)
G142206 NA non-coding downstream 477407 9226307 ~ 9226543 (+)
LOC120572401 NA other upstream 130429 8614290 ~ 8616191 (+)
LOC120572397 NA other upstream 250074 8452933 ~ 8496546 (+)
LOC120573548 NA other upstream 333286 8412679 ~ 8413334 (+)
LOC120573547 NA other upstream 346081 8390815 ~ 8400539 (+)
LOC120572385 NA other upstream 686142 8057655 ~ 8060478 (+)
tmem88b tmem88,LOC104964151,LOC103375639,LOC102237254 other downstream 1765337 10514237 ~ 10523748 (+)
LOC120573689 NA other downstream 1949384 10698284 ~ 10705325 (+)
zgc:101765 LOC104948199,LOC103360918 other downstream 2418506 11167406 ~ 11177041 (+)
LOC120573186 LOC108242886 other downstream 2455742 11204642 ~ 11308298 (+)
trnai-aau_24 NA other downstream 2709457 11458357 ~ 11458430 (+)

Expression


Co-expression Network