G142839


Basic Information

Item Value
gene id G142839
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 12270835 ~ 12275611 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU192686
AAACTCATTTATTGCAGCGCACTCGAGTGTAGACATTCAATTTCTTTCCACAGGACGGTAAGATATCACTTATGTATATCATCTGTTGTTAAACAACAGTCTCTTCTGTACATCCTCTGCCATCAGGTCAAATTTACAAATTCAGTTCAGAGTGGGATCCCTTGAGACAGATTAAAAAGGGAAAGGGGGGAATTGTTATTCATGAAAATGCTAAGTTACACTGTCTGAAATCCAAATGTCaaatgatacaaaaataaataacagactTTCCTTTTGTTTTGGAGGAAAAACTACAGTTTGTTCCTAATATTAAGAGGTGGTCTGATCTCATCCTCACCCTGGGTTAAGGTCAGGTTTTAATCTATGCAGTGCAAATGAAATATTTTACAATATTATCGCTTCTGTACAAGTCACTCTCCCAAGTCTACAATTGGACCATCTACACCCATTTCCCAACAGTTCATCACAGCACTTTGCTTtcttctgtctgtttcagcATTTAGTGGAATGTCATGttctaaaatgatttatttcttaACATTGTCAGCAGTACTGAAGAAGCCTTTTTGCAGTGTATAGCTCTAGTTAATACCAAGACCATCCAAAGCTACTGTGTAAACCATAAAATCGTCCACAAATAGTATAgccaattaaaaaaacaaaaaaaaactggttcTATGCTAGAGTAAGAAATAGCCCCAGACCAGTACATGTGAGTTACAGTTCTAATTTAACATTACAACAAGGCACATTAGCTGAACAAGTAAAGTAtgttactgttaaaaaaatgcagatattaaaaacacaagttGGACTGACTGCTCCGTCACTGAGGCACCGAGTTGTCTTATCCTGCAAGAGAACGTGGGTCTTTGTTTTAAAGTGTGGGAATCAGTAGTGTGGCATGCCTTTTCACTTCCCATTGATGTATTGGTTTTATAATCTCTTCCTCCAATCGGCTGGTTTTAATCACACGCGGTTGAGTGTTGTAGCAGAGATCAATAATACTTCTTTAAGACCTGTTTTGACCGCAGGGCTTCTGGAATGTTGTAGAATCAATTTCAGTGATTGATAATTAGTGATTGTCCTCAGTCCTCTCCCATTTACATGTGTGCTTCCAATGCATATTTACACAGACAGCTCTGAACCTGTACATTTACAATGGAACAAACTTCAACATTCATTAAGACTTGGATCACACAAAAAGTCTAAACATCGAGACGAGTtacctccccaaaaaaaaaaaaaaaggcaacccTGGTTTCAGATTTAACCCCATAGGTAAACAATATGTACAAAAAGACAGGTGGACTTGAGAcactggtattttttttttttttttttttttttttttttaataaatggtgGGACCGCTACAGTAATGGCTAATACAGGAGGACACTCACGCAAAGTCCTCCAGAGCAGGTAGAGGGGCTCTCCATGTTCCTGGTGCAGGTTAATGTTGTCCCACAGGAGCTGGACGTATACCTGCTTACTGTCCTGGGACAGTGACGTCAGGGGCAGCTGCAAACATAGAACTTTTAGTTATATTCCTGCCAAAGAGACCACACAGGAAACATAGGACAGGCTGAAGTCACTTGCTTGGGACAGAGTGAGGTCCCTGGCAAAGAGTGAATGACAAATAAGTAAATACGAAGGAAAGCCATAACAAAAGAGACTACAAAGAACAATGATAGAGGACACGTTAAGTCTTTAACCTGTACTCCTTTGTTGCAGTGTTCGGAGGTAAGGATGAGACCAGGTAGGTGAGTGTGCAGGTCCAGGCGACGGAAATACCAAACCAGGTTCCAGAAGATGATGGGGTGCTGGCTGAGGAACTTGTGGGTGTAGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU192686 True 1853 lncRNA 0.40 2 12270835 12275611

Neighbor

gene id symbol gene type direction distance location
zdhhc21 zdhhc21 coding downstream 53408 12208572 ~ 12217427 (-)
LOC120572708 nfib coding downstream 72097 12132406 ~ 12198738 (-)
LOC120573457 LOC104966162 coding downstream 279335 11977893 ~ 11991500 (-)
LOC120573708 ddit4l,LOC103390244 coding downstream 297348 11970407 ~ 11973487 (-)
trnag-gcc NA coding downstream 313436 11957329 ~ 11957399 (-)
plin2 plin2 coding upstream 15112 12290723 ~ 12294499 (-)
trnai-aau_26 NA coding upstream 135432 12411043 ~ 12411116 (-)
saxo2 NA coding upstream 142583 12418194 ~ 12421034 (-)
ostc ostc coding upstream 319956 12595567 ~ 12597466 (-)
gba3 LOC104968198,LOC102780160,LOC101481844,LOC102214071 coding upstream 877128 13152739 ~ 13157407 (-)
G142846 NA non-coding downstream 46696 12223273 ~ 12224139 (-)
LOC120573458 NA non-coding downstream 284211 11985829 ~ 11986624 (-)
G142790 NA non-coding downstream 414481 11842267 ~ 11856354 (-)
G142766 LOC103363230 non-coding downstream 707903 11553786 ~ 11562932 (-)
G142758 slc3a2 non-coding downstream 731317 11490414 ~ 11539518 (-)
G142868 NA non-coding upstream 6122 12281733 ~ 12287351 (-)
G142925 NA non-coding upstream 298926 12574537 ~ 12577019 (-)
G142952 sepsecs non-coding upstream 408108 12683719 ~ 12686501 (-)
G142984 NA non-coding upstream 473134 12748745 ~ 12750037 (-)
G143010 NA non-coding upstream 748130 13023741 ~ 13037410 (-)
LOC120573137 ppp3ca,LOC103369319 other downstream 207409 11994914 ~ 12063426 (-)
LOC120573414 LOC104960590,LOC106514884,LOC103390236,LOC107084127,LOC106908847,LOC101464045,LOC100704366,LOC102310755,LOC102193047,LOC102788271,LOC103369314,LOC103129513 other downstream 335062 11910451 ~ 11935773 (-)
prox3 LOC104947722,LOC103363229 other downstream 803816 11455015 ~ 11467019 (-)
G142745 NA other downstream 826896 11441961 ~ 11443939 (-)
gpha2 gpha2 other downstream 1116306 11149851 ~ 11154529 (-)
G142916 NA other upstream 138143 12413754 ~ 12415155 (-)
rpl34 rpl34,LOC107566275 other upstream 323142 12598753 ~ 12602673 (-)
LOC120572742 rbpms,LOC107086924,LOC107377421 other upstream 2811254 15086865 ~ 15121956 (-)
phf23b phf23 other upstream 3421488 15697099 ~ 15702094 (-)
acap1 acap1 other upstream 3744046 16019657 ~ 16043319 (-)

Expression


Co-expression Network