G142846


Basic Information

Item Value
gene id G142846
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 12223273 ~ 12224139 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU192693
CTGTATGTCTCGTTAAATCGTGTCGGGTTGAGTCTCTCCAACAGGAAATGGGTTACTATATAGAAGGCATCCTTGTTTGGTTTGTCGAACATATTCCTATTGTTAGAATAAAGCTTAACGTCAAGAACTTAAGGTTAAATGTTACTTCAAGTGAAAGCAGCCACATTAACTAGCCAAGTAGCTAACATTATTCAGTATTAACATCAGACTTACGGTCCCAGGTTGATGTGTTTAACGTTTATGTTGGTTTTGCCGGCGATTAACGACAATGCAGTGTCTGGTTGAAGTCCGAGTCCGAGAAGAGCAAACCACAGATATTTTCCAttctttttctgcaacaatgCCGGGTTCGCCATTATACCCAGTTGGACAAAGCAGTGGGAGAGTAACGTAGCTACGTAACGTTACGGTGGCGACTGGTCAAAAACCCAGCCTGGATAGctttagctgctagctagctagctaacacaaAGTTCACTTTGTCAAGATACATTTAACAGACTGTTATTTAATCAACAAAAGCTGTCGAAGGAGTTACGTGTTACAGAAGTTACAAAAACATACGTTGCGTTTGATTTCACATTTGTTAAACTAAATTCACACATTTCTGTCAGGAAAACGAAACCGCAGCAAGAACACAAACCGCCAATTTTTTTCCAATAACTACCCGGATGTTGTTAACAAATACTTCCGGGGAGCGAATAACAGCTCTATCTTTTGTGTAACCGAGGATTTATTAAGTTGCCTAGACTCAGGTTCGACcataaaataaaaggaaaaagggCTTCCCATGCTGGAACCTAGCGGCACTGGATGTCTTACTtaatggaccttttttcacagcag

Function

NR:

description
Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU192693 True 846 lncRNA 0.41 2 12223273 12224139

Neighbor

gene id symbol gene type direction distance location
zdhhc21 zdhhc21 coding downstream 5846 12208572 ~ 12217427 (-)
LOC120572708 nfib coding downstream 24535 12132406 ~ 12198738 (-)
LOC120573457 LOC104966162 coding downstream 231773 11977893 ~ 11991500 (-)
LOC120573708 ddit4l,LOC103390244 coding downstream 249786 11970407 ~ 11973487 (-)
spag17 LOC104959999,LOC104962483 coding downstream 255501 11936610 ~ 11967772 (-)
plin2 plin2 coding upstream 66584 12290723 ~ 12294499 (-)
trnai-aau_26 NA coding upstream 186904 12411043 ~ 12411116 (-)
saxo2 NA coding upstream 194055 12418194 ~ 12421034 (-)
ostc ostc coding upstream 371428 12595567 ~ 12597466 (-)
gba3 LOC104968198,LOC102780160,LOC101481844,LOC102214071 coding upstream 928600 13152739 ~ 13157407 (-)
LOC120573458 NA non-coding downstream 236649 11985829 ~ 11986624 (-)
G142790 NA non-coding downstream 366919 11842267 ~ 11856354 (-)
G142766 LOC103363230 non-coding downstream 660341 11553786 ~ 11562932 (-)
G142758 slc3a2 non-coding downstream 683755 11490414 ~ 11539518 (-)
G142751 NA non-coding downstream 775762 11441681 ~ 11447511 (-)
G142839 NA non-coding upstream 46696 12270835 ~ 12275611 (-)
G142868 NA non-coding upstream 57594 12281733 ~ 12287351 (-)
G142925 NA non-coding upstream 350398 12574537 ~ 12577019 (-)
G142952 sepsecs non-coding upstream 459580 12683719 ~ 12686501 (-)
G142984 NA non-coding upstream 524606 12748745 ~ 12750037 (-)
LOC120573137 ppp3ca,LOC103369319 other downstream 159847 11994914 ~ 12063426 (-)
LOC120573414 LOC104960590,LOC106514884,LOC103390236,LOC107084127,LOC106908847,LOC101464045,LOC100704366,LOC102310755,LOC102193047,LOC102788271,LOC103369314,LOC103129513 other downstream 287500 11910451 ~ 11935773 (-)
prox3 LOC104947722,LOC103363229 other downstream 756254 11455015 ~ 11467019 (-)
G142745 NA other downstream 779334 11441961 ~ 11443939 (-)
gpha2 gpha2 other downstream 1068744 11149851 ~ 11154529 (-)
G142916 NA other upstream 189615 12413754 ~ 12415155 (-)
rpl34 rpl34,LOC107566275 other upstream 374614 12598753 ~ 12602673 (-)
LOC120572742 rbpms,LOC107086924,LOC107377421 other upstream 2862726 15086865 ~ 15121956 (-)
phf23b phf23 other upstream 3472960 15697099 ~ 15702094 (-)
acap1 acap1 other upstream 3795518 16019657 ~ 16043319 (-)

Expression


Co-expression Network