LOC120572513


Basic Information

Item Value
gene id LOC120572513
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 17230599 ~ 17249632 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU194121
GGGTCAACCATTATGACTGTTCTTCCTAACAGAAATCAATGACGAGGACTTTAGAGATATCGTAATCACAGATGTCGATTTTGGCGTGATAGATGACAGAGGCGTTGCATATAACAATCAAAATCCAGCAGTCTTTACAGGGGttattgaaattgaggaggTAATGTCTGAAGAAAGACCACGGGCCAACGGGCAGCCAATTGTGCTGCGAGACGTCCCCACCGTCACGATTGAAACAGAATTTAGGCAGCCGGTACAGCATATGCAGTCAAGAGATGAAAACGCTGGGCACCCCTCGGCTACCCTACAAATGACTGCCGAGATTGAGCCTGCAGCATCCACAGAAAACGGTCAGGAGCCTATCCAGGCCCTCGCTGAttcagaagaagaagcagaagaagcagaaggagaggaagaagcagcagaagaagcagaagtaGATGGTGTAGTGGTTCTGAAAGCAGTTGAAGATGGCAATGAAGTGGAACTTAATCTTTCTGAAATCCTTGCCCTCGAAAGAGCATCTGAGCAGCAGCGGGAAATAGTTGAACAGAACATTACAGAGACCATCTCTCTGCAAACTCAAACTCAGGACGCGGAGATTGAACCTGAACCTGTCGCCAGGACCACGCGTCCCACTGTACGATTCAgaggacGGAGGGGTATTCATCGAGTGAGATATGTCAGGGAGAGGCCTGAACCCG
>TU194122
GGGTCAACCATTATGACTGTTCTTCCTAACAGAAATCAATGACGAGGACTTTAGAGATATCGTAATCACAGATGTCGATTTTGGCGTGATAGATGACAGAGGCGTTGCATATAACAATCAAAATCCAGCAGTCTTTACAGGGGttattgaaattgaggaggTAATGTCTGAAGAAAGACCACGGGCCAACGGGCAGCCAATTGTGCTGCGAGACGTCCCCACCGTCACGATTGAAACAGAATTTAGGCAGCCGGTACAGCATATGCAGTCAAGAGATGAAAACGCTGGGCACCCCTCGGCTACCCTACAAATGACTGCCGAGATTGAGCCTGCAGCATCCACAGAAAACGGTCAGGAGCCTATCCAGGCCCTCGCTGAttcagaagaagaagcagaagaagcagaaggagaggaagaagcagcagaagaagcagaagtaGATGGTGTAGTGGTTCTGAAAGCAGTTGAAGATGGCAATGAAGTGGAACTTAATCTTTCTGAAATCCTTGCCCTCGAAAGAGCATCTGAGCAGCAGCGGGAAATAGTTGAACAGAACATTACAGAGACCATCTCTCTGCAAACTCAAACTCAGGACGCGGAGATTGAACCTGAACCTGTCGCCAGGACCACGCGTCCCACTGTACGATTCAgagg
>XM_039821850.1
TCACAGTACTTTTCAGAAATCAATGACGAGGACTTTAGAGATATCGTAATCACAGATGTCGATTTTGGCGTGATAGATGACAGAGGCGTTGCATATAACAATCAAAATCCAGCAGTCTTTACAGGGGttattgaaattgaggaggTAATGTCTGAAGAAAGACCACGGGCCAACGGGCAGCCAATTGTGCTGCGAGACGTCCCCACCGTCACGATTGAAACAGAATTTAGGCAGCCGGTACAGCATATGCAGTCAAGAGATGAAAACGCTGGGCACCCCTCGGCTACCCTACAAATGACTGCCGAGATTGAGCCTGCAGCATCCACAGAAAACGGTCAGGAGCCTATCCAGGCCCTCGCTGAttcagaagaagaagcagaagaagcagaaggagaggaagaagcagcagaagaagcagaagtaGATGGTGTAGTGGTTCTGAAAGCAGTTGAAGATGGCAATGAAGTGGAACTTAATCTTTCTGAAATCCTTGCCCTCGAAAGAGCATCTGAGCAGCAGCGGGAAATAGTTGAACAGAACATTACAGAGACCATCTCTCTGCAAACTCAAACTCAGGACGCGGAGATTGAACCTGAACCTGTCGCCAGGACCACGCGTCCCACTGTACGATTCAgaggacGGAGGGGTATTCATCGAGTGAGATATGTCAGGGAGAGGCCTGAACCCGGTCCAGagCTGTTCAAAGTGGAGGATGCCGTGACTTATTACCGCAAGGGCAGCACTACAAAGAGTCGCCTAAGAGTGgtctggctggctggctggctggccgTCATCGGCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU194121 False 704 TUCP 0.49 5 17247951 17249554
TU194122 False 654 TUCP 0.48 4 17248088 17249554
XM_039821850.1 True 801 mRNA 0.50 7 17230599 17249632

Neighbor

gene id symbol gene type direction distance location
pcdh7b pcdh7,LOC102786590 coding downstream 5067 17119707 ~ 17225532 (-)
dthd1 NA coding downstream 668473 16549965 ~ 16562126 (-)
zgc:194930 NA coding downstream 837124 16370017 ~ 16393475 (-)
LOC120573527 NA coding downstream 911107 16316592 ~ 16319492 (-)
per1b per1 coding downstream 920100 16294156 ~ 16310499 (-)
stim2b stim2,LOC106964335 coding upstream 437442 17687074 ~ 17730399 (-)
si:dkey-19b23.8 LOC103361359,LOC104965567 coding upstream 615199 17864831 ~ 17870686 (-)
chd3 chd3 coding upstream 656468 17906100 ~ 17949657 (-)
dnajc3b LOC103361354,LOC104927603,LOC100712384,LOC101476475 coding upstream 707149 17956781 ~ 17966143 (-)
cldn15a cldn15 coding upstream 717146 17966778 ~ 17971356 (-)
G143837 NA non-coding downstream 262429 16967952 ~ 16968170 (-)
G143836 NA non-coding downstream 266867 16963489 ~ 16963732 (-)
LOC120572320 NA non-coding downstream 384555 16803547 ~ 16846044 (-)
G143812 NA non-coding downstream 531372 16694709 ~ 16699227 (-)
G143811 NA non-coding downstream 548570 16681368 ~ 16682029 (-)
LOC120573415 NA non-coding upstream 432443 17682075 ~ 17684953 (-)
G143898 NA non-coding upstream 512748 17762380 ~ 17763705 (-)
G144013 NA non-coding upstream 637646 17887278 ~ 17889652 (-)
LOC120572704 NA non-coding upstream 742513 17992145 ~ 18002471 (-)
G144037 NA non-coding upstream 766617 18016249 ~ 18019306 (-)
LOC120572710 nwd2 other downstream 775671 16397933 ~ 16454928 (-)
acap1 acap1 other downstream 1187280 16019657 ~ 16043319 (-)
phf23b phf23 other downstream 1528505 15697099 ~ 15702094 (-)
LOC120572742 rbpms,LOC107086924,LOC107377421 other downstream 2108643 15086865 ~ 15121956 (-)
rpl34 rpl34,LOC107566275 other downstream 4627926 12598753 ~ 12602673 (-)
tbc1d19 tbc1d19 other upstream 484700 17734332 ~ 17753015 (-)
rbpjb rbpj,LOC106534282 other upstream 514554 17764186 ~ 17821078 (-)
smim20 NA other upstream 602739 17852371 ~ 17853837 (-)
LOC120573700 LOC100692994,LOC102197104,LOC102799729,LOC101170466 other upstream 724267 17973899 ~ 18080804 (-)
G144058 NA other upstream 864220 18113852 ~ 18123690 (-)

Expression


Co-expression Network