c14h4orf48 (cunh4orf48,lg24h4orf48,lg3h4orf48,c18h4orf48,LOC102785068)


Basic Information

Item Value
gene id c14h4orf48
gene name cunh4orf48,lg24h4orf48,lg3h4orf48,c18h4orf48,LOC102785068
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 18536143 ~ 18539623 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU194639
AGCCACACGCATGCGCACTCCCTTAACCTACATTAAACAATCCTAGGTGGGCATCTTGCGCTGGCGTTCGGCAACAATATCGACTGATTCACGGTAATTGATCACATCATCACCATGGCGTCCAGTGGATATGTGCAGGTAGCGGTGCTCCTTCTGGCGGTGCAGCTCCTCTGTCTCCGTGCAGCTGATGCGGATCAGGAGACTGGAACTGTCATTCCTGCCGAAAGCCGCCCATGTGTGGACTGTCATGCATTTGAGTTTATGCAGCGGGCACTGCAAGATCTAAAGAAGACTGCATTTAACCTTGATGCCAGGACAGAGACGCTGGTGCTGAGGGCAGAGAGGAGGGCTCTGTGTGACTGTATGCCCACCAACTCACTGCGCTGAGTCACACCCTGACACACTGACAACAACCCTGTTCTAAACCTCTACTCCTGCACAGCGATTTTCATCTTAACTTATTCAGACAATAggcactttattttattttctgtcatatcacGGTTGAGTGAAGCTTTGATTTGAAATCATGCATCAGAAGGCATGTTATTGTTTTTGCCTTATTCGGGACGACTTTTATACCACTGATGTTTTACATCGTGAAACACATGCCTTTGGAGTTTGTTTTCATCGTCATAGGATTTGGGGTCAGTTCTCATCTGTCTCCAATGAAGCAActattttttgtactttttagtATCTGACTGTATAATGTAGATACAGTAGAATGCAtcaattaatttccttgttgaATGTGTTGTATGAGATTAATGTTTACGACGATTATACACATCAAACTGTAGCATCACGTGGAATTTATTTAACTGCTCAAAAATATCTCAATAacagtttaaaataatttaattagcTTTAGGAATCAGGCAAATTTCACTGATTTTAAATGAATTATTTGCAGCCTGGCTTCTTTTGCAAAAAGTTTCGGTAACTTGTTAAAGAaagttatttttctttgttataaccatgaagatttttttttgaaaaggaATTAGCAGAAAGAAATATTACCAGACGTTCGAACAATATTTTCAGACTTTCTTTTTTAGGCGGAAAAAGCGTACTACTTGTAGGTCTTAATTTAGCGCCGCACTGTAGCATGAAATTACAGCACTTTTTGTTAACCTACTGTTAATGTAGATTGTATGTATAGATGCTGTATATGTACACGGGTCTTCTCTGTCTGACAAAGGTGTATGCAAGAATAGTGATGAACGATATAGTATCATAAGTGAACGCAATGTCGACAGGGAAGGGAGGACAGATAGAGGAAGCTGGCTACAGCAGGGGACATAGAGATAGAAATAAtaattgtcttattgttgcTTGTTCATGAACAGTGTACTTTGTTAACATTATGTCACAAGACACACTATTTATATCTTAATGTTGTACCtatcaataaaaacaatgaataat
>XM_039821355.1
accgGAAGTCTTGATTCGGGTTCTCAAAGCAGATTTTCGATGAGCCACACGCATGCGCACTCCCTTAACCTACATTAAACAATCCTAGGTGGGCATCTTGCGCTGGCGTTCGGCAACAATATCGACTGATTCACGGTAATTGATCACATCATCACCATGGCGTCCAGTGGATATGTGCAGGTAGCGGTGCTCCTTCTGGCGGTGCAGCTCCTCTGTCTCCGTGCAGCTGATGCGGATCAGGAGACTGGAACTGTCATTCCTGCCGAAAGCCGCCCATGTGTGGACTGTCATGCATTTGAGTTTATGCAGCGGGCACTGCAAGATCTAAAGAAGACTGCATTTAACCTTGATGCCAGGACAGAGACGCTGGTGCTGAGGGCAGAGAGGAGGGCTCTGTGTGACTGTATGCCCACCAACTCACTGCGCTGAGTCACACCCTGACACACTGACAACAACCCTGTTCTAAACCTCTACTCCTGCACAGCGATTTTCATCTTAACTTATTCAGACAATAggcactttattttattttctgtcatatcacGGTTGAGTGAAGCTTTGATTTGAAATCATGCATCAGAAGGCATGTTATTGTTTTTGCCTTATTCGGGACGACTTTTATACCACTGATGTTTTACATCGTGAAACACATGCCTTTGGAGTTTGTTTTCATCGTCATAGGATTTGGGGTCAGTTCTCATCTGTCTCCAATGAAGCAActattttttgtactttttagtATCTGACTGTATAATGTAGATACAGTAGAATGCAtcaattaatttccttgttgaATGTGTTGTATGAGATTAATGTTTACGACGATTATACACATCAAACTGTAGCATCACGTGGAATTTATTTAACTGCTCAAAAATATCTCAATAacagtttaaaataatttaattagcTTTAGGAATCAGGCAAATTTCACTGATTTTAAATGAATTATTTGCAGCCTGGCTTCTTTTGCAAAAAGTTTCGGTAACTTGTTAAAGAaagttatttttctttgttataaccatgaagatttttttttgaaaaggaATTAGCAGAAAGAAATATTACCAGACGTTCGAACAATATTTTCAGACTTTCTTTTTTAGGCGGAAAAAGCGTACTACTTGTAGGTCTTAATTTAGCGCCGCACTGTAGCATGAAATTACAGCACTTTTTGTTAACCTACTGTTAATGTAGATTGTATGTATAGATGCTGTATATGTACACGGGTCTTCTCTGTCTGACAAAGGTGTATGCAAGAATAGTGATGAACGATATAGTATCATAAGTGAACGCAATGTCGACAGGGAAGGGAGGACAGATAGAGGAAGCTGGCTACAGCAGGGGACATAGAGATAGAAATAAtaattgtcttattgttgcTTGTTCATGAACAGTGTACTTTGTTAACATTATGTCACAAGACACACTATTTATATCTTAATGTTGTACCtatcaataaaaacaatgaataattttt

Function

NR:

description
PREDICTED: neuropeptide-like protein C4orf48 homolog

GO:

id name namespace
GO:0005576 extracellular region cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU194639 False 1434 lncRNA 0.39 4 18536147 18539581
XM_039821355.1 True 1480 mRNA 0.39 4 18536143 18539623

Neighbor

gene id symbol gene type direction distance location
nat8l nat8l,LOC106918818,LOC104966448,LOC106577818 coding downstream 13402 18498740 ~ 18522741 (-)
LOC120573208 ptgr1 coding downstream 98547 18431393 ~ 18437596 (-)
txn NA coding downstream 106410 18425792 ~ 18429733 (-)
slc7a8a LOC104932911,LOC102238406,LOC103388347,LOC103358414,LOC103475980 coding downstream 247309 18267721 ~ 18288834 (-)
gmpr2 LOC104953876 coding downstream 271126 18259034 ~ 18265017 (-)
faah2b faah2 coding upstream 11917 18551540 ~ 18561053 (-)
pik3c3 pik3c3 coding upstream 73050 18612673 ~ 18626072 (-)
rgp1 rgp1 coding upstream 92455 18632078 ~ 18637992 (-)
LOC120572304 ipo8 coding upstream 125568 18665191 ~ 18701577 (-)
trnan-guu_11 NA coding upstream 155076 18694699 ~ 18694772 (-)
LOC120573605 NA non-coding downstream 286086 18248443 ~ 18250057 (-)
G144037 NA non-coding downstream 516837 18016249 ~ 18019306 (-)
LOC120572704 NA non-coding downstream 533672 17992145 ~ 18002471 (-)
G144013 NA non-coding downstream 646491 17887278 ~ 17889652 (-)
G143898 NA non-coding downstream 772438 17762380 ~ 17763705 (-)
G144275 NA non-coding upstream 160586 18700209 ~ 18700555 (-)
G144303 LOC103360597 non-coding upstream 288841 18828464 ~ 18830315 (-)
G144346 NA non-coding upstream 396352 18935975 ~ 18936227 (-)
LOC120572676 NA non-coding upstream 453846 18993469 ~ 19002231 (-)
G144422 NA non-coding upstream 558959 19098582 ~ 19098840 (-)
mrpl52 mrpl52,LOC102784052 other downstream 363116 18169214 ~ 18173027 (-)
G144058 NA other downstream 412453 18113852 ~ 18123690 (-)
LOC120573700 LOC100692994,LOC102197104,LOC102799729,LOC101170466 other downstream 455339 17973899 ~ 18080804 (-)
smim20 NA other downstream 682306 17852371 ~ 17853837 (-)
rbpjb rbpj,LOC106534282 other downstream 715065 17764186 ~ 17821078 (-)
G144258 NA other upstream 55479 18595102 ~ 18597231 (-)
clcn3 clcn3 other upstream 423243 18962866 ~ 19056782 (-)
prkd4 LOC103376196 other upstream 708327 19247950 ~ 19266353 (-)
LOC120572670 NA other upstream 743310 19282933 ~ 19353306 (-)
si:cabz01074946.1 NA other upstream 1117460 19657083 ~ 19665792 (-)

Expression


Co-expression Network