G144859 (LOC104961498,LOC106912199)


Basic Information

Item Value
gene id G144859
gene name LOC104961498,LOC106912199
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 20218079 ~ 20314393 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU195470
TCCGGCGACCATCTTTGTTTTGCTGAAAAAAAGTAGCAacttgttctcttaatacatccatgggcaaAATGGCGTAACGTTAGGTGTGCAGCcatcatattatatatttttgtttgttgaatAGTCATCAAGTTATCCCGAAAATATCCTAAAAACAGCGATCCTTCACAGATGTAAAAGCAGTCAGGAGGCTGTAGAAGAGTGTCCTCCCTCCACCACTCCTACTTTCAGCCGCAGCACTCCTTGATgtccttcatctcctcctcgTAGTCTTTGATCGTCTGCTCCACCTTCTTGCGGTCTGTCTTTGAATGGACTGTGTCAGTGATGTTGGCTGAAGCGGACGCCACCCCACCTGCCGTAGCTACACCAATGCCTACAGCAGTGACGATGAGCGATGCTCCCGCTGTAAAGGGCGCCAAAATGAGGCCAGTGATTGTAGTGATAGACCCAGCAACACTGGCCACCCCACCACCGACACAGGCCTTGACGGTTTTCTTATGGAAAACGTCAGCTGAATCAGCCAAAGCGAGCAGCTCCAGGATTCGCTGCTGGAGTGAGGCGCCGCGCTGGTTAAAGAAGCGAACAAAAAGTTGAGCTGCCATGAAGACACGGTCAGCTGCTTGTTCCACCACTCTGAGACAAGGACACAAGGAAAATGTTACAAGAAAAACACTAGATTATAATGCaaatttaagtttaaaaaaaggaccTAAATAACTTTCAACCAAGAACCATTTATGTATTGTATATAACGCTTTTGGTAAAGGTTAGTTCTGTAGACAAGATGAGTAATGTGTCAACCTTAGTTGTTAAGGATAAGCAAACTATTTTTTAAGGTAGAAATGTCTTACTGTAAATATATAGTAGATTGTCTGGGATTTAAGCCATGGTATTGTGATACAATGTTTTCTGTTAATATTGGCCTGTGCAGCTCTTAATCCTTACAAAATAAATTCTACAAGCAAATTCATAACTTCAAAATGCACTTACTCTTCAGGTTCATCGTTCTGGTTGGTCTGATTCCACTCATCCCAGCCTAACACACGAAAGAACGATTACAACTACAAGTCATAGCGTATAAGCAGCAGGTTCCCcaataaatcaacaaaacatTGTCAATATCAAGCATACCCCCTACTGTTCTCCACCACGCTAAAAGGCCTTCCTCATCCTGGAAGTCAACAATTTGAAACTCGTTAGAATAATTCCATATGTATTGTATTaaatacacataaaacaagcagcATGTGATATAACATAAGACCAGTGATGTTGATTGGTACGCGTCCTGCATCTCTGACGCATTAAAATCTTAAAGGACGTAGTAAACTCACTATTCATGCGTCCTTGGGATGCACCCAGTTTTTTCCCTGATAATGCTACATTGTCAAACCTGTCTTGAAATCCTAAAAATAAACCAACAAAACGTGCGCATAAGACAGGTCCCCAAGAGGTATGAAAACTGTGCGCACACACTGGTTACGGTTCTGGGCATGTTGTTCGTCTAATTTCAGCCTCACAGATTTCAGTCCAAATGGcttgtttagaaaaaaaacttagttattggggggggggaagcctTGCGCCATAGTGAAACCGCAATTGGCTGGCACGGACAAAGTGCTGTGTGCAGCTGTCAGTCTGTCTCTGTCGGTCTGCTGTATGAGAACATTATGGATTTAGTGTTGGATAAAGGGCACTGAGCAACACGTGTAGCTTATGGTAGCAGCAATTCTTCCAATATTAGGGTGCATTTACGTAGACATCTCGCCAGTGTGTCTATGGAGAAGAGAGTCTGGTAGGGAAGagcattcatttaaaaagcctaaaaaacaaaccaatcCATAATGCATTGGGCGGGTTTATAGCGACAGATGCAGTCTTGGAGGATGTGCGTTTAGCGTATGATTTCAGCAACACTGTAAATTCCCAACTGTTGGCAACATAATGTTGCACAcgggcactttttttttttgggagaaaagaaaacatgcagccacatttttttcattttatagtAAAATACCGTGTTTAAAATACCCATTTTTAAGTGGAAATACTATTTCCATTAggaaattttttttaagtgctggTTGAGCTCATGCTTCACTTGATGTTGTGGACAGTTTATTATAAAACTAAAGCTGCAGTTTTTGTTTGCACTTATTAGAAAAcctattatttttaataaagatttataaagataaagataataAAGTGTTCCTTGTGATCTAAACCagtctttcaaaataaatgaaaatgttgaaattggCAAAAGGTGGGCCCTTTACCAAAAAACGTACCtaactgaaccgaaaaccgtgacatGTACCCAACCGTGAATTTTGTAAATGTTTGTCTAATCAAATTTTTCAGAtggatttaaataaaaaggttaatGATTGATGATTTTAACGATTTTTGATCATGtagaaaaacaaagatttaaaaATGTGGATGGTCCACAATCATTGTAGGAAGGGCTTATATATCCAGGAGGATAGTTAAGGACTGTCTGGGACCCACTTAAATGACCACCTATGGGTCCCGCAGACTCACTACATTGAAAACCTATCCGCATCATTAAGACATTAAGAATAAGCTTACTTCTAGAGGGTCCAGGACCGTTCCTTCACTGGGCACTGGTACTTCAGCCATCTCTAGTGTCTGAACTTCCACTACTTCCTAGAAGAGAAAAGTACAGCGCACTGAATTAATTCTGTCCAAAAGGCTGTCCTGTTTTGCTGCCATACAATGGTTGAAACCTTTCACCTTGCTACATCCTTTGTTCCCATTTCAGAAATGCTAATTGGTTACCATTCGGCATGcaacaatataaaatattcactaTTTTGACCAATGGCCATTATACAATATCAGTTATCGacgaaaaacattttaatgacttACTATAAAACAATCTTCAGTCaccttctgtaatgtctgtaatgtcttcAG
>TU195471
cgtctgtctgtcaaTCTGTTCCCAGCGCAGTCTGTTTGCCAATCTGTCATATTCTGTTTGCAAGATAAGGAGattgagagaatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgcgtgtgcgcgcgtgcagttaatctgctctagcttttccaatgtttcacACACAGATATGGCCCAATATGAtgtgatttctttatttatttattgaaaaacatcacatttttttgagggaggacccctaaactcCCGGCCAAAAACCTAGGGAAAACGCTCTTGGGAGAAACAATTACAGTGATAATTGAGTGACTGTTTTTGTCTAACTGTCAAGATTTGCTTGGGTTTGTGGTGTTAGGATTAAGACAGGCTTTGGTTTGGTTTTCTAACCAGCCTTCATTCGTCAAATTCTGCGAGTTTCTTTAACTCGGACCTTAAAAGCTCTTCATCCTCTTCGCCCCTCGTCTACCTCCACCTCTATTCCATCAATGGTTTTCTGCAGCTGTTCCTTGATGCGGTTTAGCTCCAGCAGCCCATCCTGCAGGTCCCTACAAACCTCTCGAATCTTAGCAGCAAACTCTGTCTTGGCTCCCTTTTTTAGCTCCATGGTATCCTTTGCCAGGAAAAAGATGTCGAGAGCCAGGAAGAGACCCGACATAACTCCAGTGGTAACGCTCATCACTTGGGCGGCTTTAGCAGCACCCCCTGCAACACTGAGGACTTGAACGGTACTAATCAGGCTCTCGGTGTTGATCATTAAAGCCTTTCCGGCACGCCCGCCCTCCTTCATTACATGTTCAACGTTCTTGTTAAGGTGCTTCTGTGCGATGCTCTCAACATACTTCTCAAAGTTCCACTCCTCAAGCGTCTCCATCCCTTCCTGCAAAAACTCTAGGCACTCCTTGATgtccttcatctcctcctcgTAGTCTTTGATCGTCTGCTCCACCTTCTTGCGGTCTGTCTTTGAATGGACTGTGTCAGTGATGTTGGCTGAAGCGGACGCCACCCCACCTGCCGTAGCTACACCAATGCCTACAGCAGTGACGATGAGCGATGCTCCCGCTGTAAAGGGCGCCAAAATGAGGCCAGTGATTGTAGTGATAGACCCAGCAACACTGGCCACCCCACCACCGACACAGGCCTTGACGGTTTTCTTATGGAAAACGTCAGCTGAATCAGCCAAAGCGAGCAGCTCCAGGATTCGCTGCTGGAGTGAGGCGCCGCGCTGGTTAAAGAAGCGAACAAAAAGTTGAGCTGCCATGAAGACACGGTCAGCTGCTTGTTCCACCACTCTGAGACAAGGACACAAGGAAAATGTTACAAGAAAAACACTAGATTATAATGCaaatttaagtttaaaaaaaggaccTAAATAACTTTCAACCAAGAACCATTTATGTATTGTATATAACGCTTTTGGTAAAGGTTAGTTCTGTAGACAAGATGAGTAATGTGTCAACCTTAGTTGTTAAGGATAAGCAAACTATTTTTTAAGGTAGAAATGTCTTACTGTAAATATATAGTAGATTGTCTGGGATTTAAGCCATGGTATTGTGATACAATGTTTTCTGTTAATATTGGCCTGTGCAGCTCTTAATCCTTACAAAATAAATTCTACAAGCAAATTCATAACTTCAAAATGCACTTACTCTTCAGGTTCATCGTTCTGGTTGGTCTGATTCCACTCATCCCAGCCTAACACACGAAAGAACGATTACAACTACAAGTCATAGCGTATAAGCAGCAGGTTCCCcaataaatcaacaaaacatTGTCAATATCAAGCATACCCCCTACTGTTCTCCACCACGCTAAAAGGCCTTCCTCATCCTGGAAGTCAACAATTTGAAACTCGTTAGAATAATTCCATATGTATTGTATTaaatacacataaaacaagcagcATGTGATATAACATAAGACCAGTGATGTTGATTGGTACGCGTCCTGCATCTCTGACGCATTAAAATCTTAAAGGACGTAGTAAACTCACTATTCATGCGTCCTTGGGATGCACCCAGTTTTTTCCCTGATAATGCTACATTGTCAAACCTGTCTTGAAATCCTAAAAATAAACCAACAAAACGTGCGCATAAGACAGGTCCCCAAGAGGTATGAAAACTGTGCGCACACACTGGTTACGGTTCTGGGCATGTTGTTCGTCTAATTTCAGCCTCACAGATTTCAGTCCAAATGGcttgtttagaaaaaaaacttagttattggggggggggaagcctTGCGCCATAGTGAAACCGCAATTGGCTGGCACGGACAAAGTGCTGTGTGCAGCTGTCAGTCTGTCTCTGTCGGTCTGCTGTATGAGAACATTATGGATTTAGTGTTGGATAAAGGGCACTGAGCAACACGTGTAGCTTATGGTAGCAGCAATTCTTCCAATATTAGGGTGCATTTACGTAGACATCTCGCCAGTGTGTCTATGGAGAAGAGAGTCTGGTAGGGAAGagcattcatttaaaaagcctaaaaaacaaaccaatcCATAATGCATTGGGCGGGTTTATAGCGACAGATGCAGTCTTGGAGGATGTGCGTTTAGCGTATGATTTCAGCAACACTGTAAATTCCCAACTGTTGGCAACATAATGTTGCACAcgggcactttttttttttgggagaaaagaaaacatgcagccacatttttttcattttatagtAAAATACCGTGTTTAAAATACCCATTTTTAAGTGGAAATACTATTTCCATTAggaaattttttttaagtgctggTTGAGCTCATGCTTCACTTGATGTTGTGGACAGTTTATTATAAAACTAAAGCTGCAGTTTTTGTTTGCACTTATTAGAAAAcctattatttttaataaagatttataaagataaagataataAAGTGTTCCTTGTGATCTAAACCagtctttcaaaataaatgaaaatgttgaaattggCAAAAGGTGGGCCCTTTACCAAAAAACGTACCtaactgaaccgaaaaccgtgacatGTACCCAACCGTGAATTTTGTAAATGTTTGTCTAATCAAATTTTTCAGAtggatttaaataaaaaggttaatGATTGATGATTTTAACGATTTTTGATCATGtagaaaaacaaagatttaaaaATGTGGATGGTCCACAATCATTGTAGGAAGGGCTTATATATCCAGGAGGATAGTTAAGGACTGTCTGGGACCCACTTAAATGACCACCTATGGGTCCCGCAGACTCACTACATTGAAAACCTATCCGCATCATTAAGACATTAAGAATAAGCTTACTTCTAGAGGGTCCAGGACCGTTCCTTCACTGGGCACTGGTACTTCAGCCATCTCTAGTGTCTGAACTTCCACTACTTCCTAGAAGAGAAAAGTACAGCGCACTGAATTAATTCTGTCCAAAAGGCTGTCCTGTTTTGCTGCCATACAATGGTTGAAACCTTTCACCTTGCTACATCCTTTGTTCCCATTTCAGAAATGCTAATTGGTTACCATTCGGCATGcaacaatataaaatattcactaTTTTGACCAATGGCCATTATACAATATCAGTTATCGacgaaaaacattttaatgacttACTATAAAACAATCTTCAGTCaccttctgtaatgtctgtaatgtcttcAG

Function

NR:

description
PREDICTED: uncharacterized protein LOC106912199 isoform X6

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU195470 False 2961 lncRNA 0.40 4 20218079 20266868
TU195471 True 3687 lncRNA 0.42 4 20218079 20314393

Neighbor

gene id symbol gene type direction distance location
LOC120572322 NA coding downstream 44677 20168039 ~ 20173402 (-)
si:ch211-63p21.1 LOC103371025,LOC102193822,LOC102788031,LOC101475184,LOC100709095 coding downstream 124640 20087447 ~ 20093439 (-)
LOC120572528 NA coding downstream 132942 20080741 ~ 20085137 (-)
cbln11 NA coding downstream 147455 20064796 ~ 20070624 (-)
LOC120572266 NA coding downstream 323156 19880340 ~ 19894923 (-)
LOC120573438 NA coding upstream 202372 20516765 ~ 20519445 (-)
LOC120573440 NA coding upstream 220508 20534901 ~ 20540345 (-)
LOC120573441 NA coding upstream 228906 20543299 ~ 20547280 (-)
LOC120573443 NA coding upstream 244659 20559052 ~ 20560773 (-)
LOC120573444 NA coding upstream 252011 20566404 ~ 20570193 (-)
G144857 NA non-coding downstream 7517 20208105 ~ 20210562 (-)
G144853 LOC103375002 non-coding downstream 15976 20200141 ~ 20202103 (-)
G144842 NA non-coding downstream 38503 20163178 ~ 20179576 (-)
G144840 LOC104941081 non-coding downstream 58751 20130190 ~ 20159328 (-)
G144839 NA non-coding downstream 91419 20126432 ~ 20126660 (-)
G144871 NA non-coding upstream 21130 20335523 ~ 20372319 (-)
G144884 NA non-coding upstream 61249 20375642 ~ 20399664 (-)
G144895 NA non-coding upstream 133656 20448049 ~ 20456125 (-)
G144910 NA non-coding upstream 162316 20476709 ~ 20514689 (-)
G144908 NA non-coding upstream 193669 20508062 ~ 20511615 (-)
G144730 LOC100695354,LOC106632790,LOC105940461,LOC104965881,LOC101481059,LOC106632521,LOC103369240,LOC102791106 other downstream 420549 19776680 ~ 19797530 (-)
si:cabz01074946.1 NA other downstream 552287 19657083 ~ 19665792 (-)
LOC120572670 NA other downstream 864773 19282933 ~ 19353306 (-)
prkd4 LOC103376196 other downstream 951726 19247950 ~ 19266353 (-)
clcn3 clcn3 other downstream 1161297 18962866 ~ 19056782 (-)
LOC120573300 slc12a6 other upstream 512890 20827283 ~ 20863889 (-)
nop10 NA other upstream 550364 20864757 ~ 20867106 (-)
LOC120573168 LOC103355779 other upstream 592062 20906455 ~ 20929559 (-)
si:dkey-172j4.3 LOC102306481,LOC103363024,LOC100708735,LOC101468909,LOC102781820,LOC101073787,LOC108246481,LOC106609052 other upstream 1036849 21351242 ~ 21438456 (-)
G145209 NA other upstream 1089462 21403855 ~ 21434195 (-)

Expression


Co-expression Network