G145325


Basic Information

Item Value
gene id G145325
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 22147578 ~ 22153086 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU196105
AAAAAGAAACAATATGTTTGTGACACAATAGTAACAAATGCATtgaattttttcaaatgctttaTTTCACTTTTCTCCAGCCTTCTACATGTAagttatacagtacagtagataGTACACAGTACAAAGATAATTTGGGTTTAAAAGTGCAATCCTAGTAAAACATTTCTCAAACATGATGAGTGTACAAAATATCAGCAACCACCTGCTCTGTGCATGAAGTAAACTATGCAGGCGAGTTGAAGCGAAATCCACGGTCGCTTATTAATTTGAAGAGATGGatgtgcaaaacaaaacaaagctgtGCAGCTCGTTATTATGAATCTGTTGCTAATATTTGTACACTTGGCCAAGATATTTGTTAAATTGGTTAGCCTACACATTTAAGATTGACTGAAGTAGATATCTAAAAGTTCCCACTGAAAAAGTTGAACAAAATCCAGTTAGTGTGATTGATTATTCTAAAACAAAccataaaaataacataaacaaatatatttaaaaaacaaaataaagaaatacatacataaaatgATGTAAAttggtacatttaaaaaaaattataatttggaaactgagaataaaataaattatgaaaAGAAATATGAGAATCATTGCATTACACCAAATCAGTATGCATGCATTACATGTTATGAATAATGTTGCCATCACTAACTTTGACAAGAAGCTCTGCCTTCTTAAAAATAACGCTCTAAAGATAAAActagaacaaaaaacacaaggaTGTTGAAATCGAAATTGCATCAATATTTTGTAACGTCTGATGCTTCTGCTTTATCTTATCTCCTCCCTTTTTGTTTCCCCTTTCATGCCCTTTTTCCTACTTTGCTTTATCAatccttttcctcttttgaaCACTTTTTGCCTCTGACAGTTGACTGTGATCCAGCAAGTCAGTTAAATTATGTTTAGATGTTTAGGTGGATAACAAGTGCATTTGTATGCCTGTTGGAGATTTCTAAGGCCTGTTGATTAATACGAATGATTCAGATTGATGATGTTCCTGCTGTTAGCAatagatataatataatatatgtcaTAATTTATGAGTGACTGTTAAATATGTGTCATATTTAAAGATTTTTGTGTTTAAGATAAccaattgttgctataacagAAGCAGGAATTAATAACAAATCAGGACAAACATGCTGTGACGACTTTCTTTTACTGACAGTTTAAACTGGTTTTTGTTACCAGTGCAGTTTCTTTTTTTCGGGTTCTGTTTGTCTAGACGAATTCTACTCAAGACTTAGGCTACTCTTGCTGTTTTCTTGAATCAAGTTTTTATTCGGGGTCATCCGAGCTGTCCTCCTCAGAGTTTGGCCGCTTGAGTCTGCCTTCCGGTCAGCACTGGACTGGACCTGTGGGACCAACGGACCTGCACACACCTGGTGCCAGCATTAGCAGCACAATGCACAGTGCCACTGCCGCTTTCCTTTGGGTGAAGAAGCCTTTCTCCTGCATCTTTACGCTCTTCACAAAAATCAACGGTTTCCGGTCGTTTGCCAGTAAGACCAAGGCTCTTCAGTCTTGAGTAAAGTTGATCTCGACCAGCTACGTTCCCTGATATCTGACACCTTCTGGAGGACTCAACCAGCTCAGCTTTAATGTAGCTTCTTGAGTCCAAGTAGTGAGTCTGAAGGTTGTGTGGAGCAGGTTCTCGCTAGTCTCTTCAAGTCAGCCTGACTCAGCGAACTCAGCTGTGACACCGGCAAAGAAGGCTGGGCTCTCCTTTATACAGACAGGCCATGATCCCAGGGGAGAGGAAgccagagggagggagaaagagtcACAGTCCATGCTGTGTCGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU196105 True 1835 lncRNA 0.38 3 22147578 22153086

Neighbor

gene id symbol gene type direction distance location
clcn5b clcn5 coding downstream 108013 22000595 ~ 22039565 (-)
htr2cl1 LOC101072775 coding downstream 464226 21537147 ~ 21683352 (-)
zgc:109889 LOC103480395,LOC103144648,LOC102211070,LOC101469879 coding downstream 613174 21488632 ~ 21534404 (-)
rab39bb rab39b,LOC107091979,LOC106527197 coding downstream 963121 21167499 ~ 21184457 (-)
LOC120572532 NA coding downstream 1015028 21131568 ~ 21132550 (-)
phka1a phka1 coding upstream 11149 22164235 ~ 22200049 (-)
usp12b usp12,LOC107707922,LOC103480258,LOC103363176 coding upstream 373503 22526589 ~ 22550975 (-)
LOC120573632 NA coding upstream 417710 22570796 ~ 22573146 (-)
LOC120573633 NA coding upstream 420465 22573551 ~ 22580271 (-)
LOC120573582 NA coding upstream 428234 22581320 ~ 22605991 (-)
G145327 NA non-coding downstream 68087 22079134 ~ 22079491 (-)
G145330 NA non-coding downstream 104885 22042426 ~ 22042693 (-)
G145213 NA non-coding downstream 667605 21475383 ~ 21479973 (-)
G145141 NA non-coding downstream 986102 21158902 ~ 21161476 (-)
G145106 LOC104951910 non-coding downstream 1046772 21055824 ~ 21100806 (-)
G145334 NA non-coding upstream 2324 22155410 ~ 22155707 (-)
G145337 NA non-coding upstream 48495 22201581 ~ 22201943 (-)
G145343 NA non-coding upstream 77986 22231072 ~ 22231314 (-)
G145345 NA non-coding upstream 79248 22232334 ~ 22257278 (-)
LOC120572729 NA non-coding upstream 107375 22260461 ~ 22260937 (-)
shroom4 shroom4,LOC107741461,LOC107562256,LOC107691917 other downstream 21097 22045501 ~ 22126481 (-)
ccnb3 ccnb3 other downstream 168152 21881290 ~ 21979426 (-)
si:dkey-172j4.3 LOC102306481,LOC103363024,LOC100708735,LOC101468909,LOC102781820,LOC101073787,LOC108246481,LOC106609052 other downstream 709122 21351242 ~ 21438456 (-)
G145209 NA other downstream 713383 21403855 ~ 21434195 (-)
LOC120573168 LOC103355779 other downstream 1218019 20906455 ~ 20929559 (-)
G145342 NA other upstream 76973 22230059 ~ 22230502 (-)
G145509 trpc5,LOC103389248 other upstream 661820 22814906 ~ 22817623 (-)
LOC120572139 NA other upstream 1696584 23849670 ~ 23855268 (-)
LOC120572715 NA other upstream 1901914 24055000 ~ 24075036 (-)
LOC120572219 NA other upstream 1979140 24132226 ~ 24140420 (-)

Expression


Co-expression Network