LOC120573113


Basic Information

Item Value
gene id LOC120573113
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 24233641 ~ 24363065 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU196734
TAATAGTAAAGCAGTGATCCAAAAGAACAAAACTCACTTTCATAATTCAAACAACTTGAGGTGATGAACAGGAAGTGTCTCATGTGGTACTGAGAACATGTGTTGAAGTATTGTGTAACATATCCCCTTTAAAATGACATCAGCGTTGAAGCTGCTTTTAAAATAGTGAGAGTGAGAAAATATAATgctcttgttttgttttaatgcagTTCTAGACAGACTGTCcttttcatttcattcATACTGTATGCTCTGTTACAAGCTGTTTATTGCCAACGTTTTGTATCTCTTATTTTCCTATTTGTCCCATCTTTTAACTGTGTTATTTATCAATTACAGTATGTTCTGTatattttttgctttcttcGCCAATTTCCAGTTCC
>TU196737
TTACAGCAGCGAGGGATCTGCCCGAACCTgagacaccaaacacaacaagtcCACCAaacacaacaagtcCACCACAACAGGAGAATCGGAGAAGGATCGGTCTCTACTGTGGTCTGACAGCAGCTATGTTGGCTGGTTCTATCTGTTTTTTCAGCCTTCTGAGACCCCAAACACAACAAgtccaccaaacacaacaagtcCACCATAGAGTCGGGGAAGGATCTGACTCTACTGTGGACTGGGACTGACAGCAGCATCAGCTCTGCTGGCCTTGTCAGTCcacttttgtttctgtttgttcagAAACGTTCTGCAGAGAGAACCAGATTCCCATTTGGCGAATATAAGTTACAGATCAGCAGATGATGGTTTAGAGTTCA
>XM_039822589.1
GAATATGCTACTACTGAGCCGTTTTCAAAAGTCGATTGGATGAGTTTCAGGGAGAAGATGATCTGCAGCATCCTGCTGCTCATCATCCTGACCTCCTGTGTCTCTGGAACGTTTGTAGTGAATGTGACCCAGACCTCCTATCAGGCAGAGGAGAACCACCACATCACACTGGAGTGGACCTTCACAACCAACCCTCACACTTCCTCCAACTCTCTGAATATCTTCTGTGAACTGTTAACTGTCAAGAATCCAGTCCTGTTTCATCTCCATGAAGGAGTCGAGGTCCCAGAGTCTCAGGATGAACAGTTTGCAGGACGAGTCCAGTGGGACAAAGACGTCCTCAGAGAAGGACGACTCAGACTTCATGTGTCCAGACTCAGGACTGGAGACTCGGGACTGTACCTGTGTGATGTTCTCACAGATTATTGGAGTAACTCTGTTAGATGTTTACTCAATGTCACTGCAGCGAGGGATCGGCCTAAACCTgagacaccaaacacaacaagtccaccaaacacaacaagtcCACCACAACAGGAGAATCGGAGAAGGATCGGTCTCTACTGTGGTCTGACAGCAGCTATGTTGGCTGGTTCTATCTGTTTTTTCAGCCTTCTGAGACCCCAAACACAACAAgtccaccaaacacaacaagtcCACCATAGAGTCGGGGAAGGATCTGACTCTACTGTGGACTGGGACTGACAGCAGCATCAGCTCTGCTGGCCTTGTCAGTCcacttttgtttctgtttgttcagAAACGTTCTGCAGAGAGAACCAGATTCCCATTTGGCGAATATAAGTTACAGATCAGCAGATGATGGTTTAGAGTTCAATCAACAACTGAGGCAAAATTGTTAGAATTAACTGTTTATAtcacagacacaaagaaaatACTAGTTTCTCAGCTAATACAACAgcaggtaaccatagcaacGTTGATGTTTCAAACACATGAAAATCAGCAAAATGAACACTAACAATCTGTAAAAGGTGATGACTGAAACACATTCATGATATAAAAGTCTAACTACAGAACTGatatacaaaaaataattatggaGGAAAACAATGTTCTCATTATTTTTATGGGATGTCTCGTCAAACTGTTAGAGGAGACCGGAGCAATCgtcacatattttacattttccttCATAATTCACAGACAACTTAAAATACTCTCGTCATCTTTTGatacaagaaacacacacacacgtgtgtgtatgtgtgtataaatgtTTTATCTGATGTTTGATCTGATTCATTAATTTGTCACAAACAAATGTGTCCATTAAATTTCAATACTTAATTTCATTAAGATGTTAAACTTGAAGAGTCCACAATTTCTGGAAGATTAGTATGTTATGTTTCTAACTAAAAAAAGTTATTTCaatattattaatgtatttacattgatgacatttaaataactttaaaaaactTAATTTTGTTCTTTGCTGACTGTGATATCTGAACATGTTGCAGCTCTAACTGACCGTATTGAACTTCTGATGATTTGTTGAATTGGAACCACGAATGGGAGAAAAgctgttttttgttcttttgtttaaatatacgttttatttctatttatacTTATTCACATTCACCAAGTGATTCAACTAATAATTCAAACGTTCACAGGTCGTATATATGAAAACAGCCACCCAATACATTCACACAGTAAATGATGAATAGCGAGGTTTATTTACACACTATAGAAAACAatagttatattttaaatgtgtataaaaaaagaaaatgcttcagAGAGTCAAAAGTGTTTTGCGGAAGAATAAGATTGTCCACCAGGTGTCCTCAAACTTTCCTCTAAACAATACTTTGTTTTTTATGATTTCAGAAAGGAGGAGGTAAACCATGTAGAAATCTTCTTTAGGAGGCGTACTCTCTGTGGCATCATGAAGGTGTCCAAGTCCTAGAAACGCGTTTCCTGTCATCTCTTCATACATGATCATGatCAGACTCACAAACTGGaactctgtcctctggtctcctgGTTTGGATCTTAAATGACTGAAGACACACAAGtccctagtgAGACCAGAACCAGAGAGTCGGGGAATGATCGACCTCTACGCTGGACTGACAGCAGCAGCTCTACTGGCTATTTTACTAAATTTactgataaaagaaaaaaatgagtcGTCAGAGCTCTGATTCGAGACCTGAGAGTCCCAGACCCTCTCCCTCCAACGTCTGTCTTTAGGGTAAGAAGGTCAACGTCTGATGTGACTCCATTCAACCACCTGCCCGCCCCTGGCCCTTAGAGAAGAACAtttaacaaataataataaccaGCCAGAAATAAAATGAGAAGGACCTTCAGCCATTTCACATCACACGATGACCAGACAAGTTGAAGTGTGGGTCAGACTCCCTCCATGTCCCTCTAtgacaggggtcttcaacgtttttccagccaaggacccctaaactgagagagagacggatcagggacccccctaCTACATGTTGTATATAATTAGGTTGCATAATAAGctaggcctacaataacgtgtgggcagcctaaagcctttatacataactTTTTAGtccatagaatactaagctattaatatttgttgccatgattttatgaatcatattttaatgataaacatacatgtggcacaatGAATCCTCAGGATTAACTGTGCATGGCTACCATAGTGAGTTCCtttaggccagtaagcctatcatcattttttttctcaaataggCTGAttaatatttgctaataatatgttggattcgtgttaagacattttgtttttatttattttttttacctttaaaaaattacaacaacaacaacaataattaaCAATAATATGAAGGCCCCCTCTGCAGTGActctgaaaaaaacacacagttgCGCTGACTCAACCATTCATACACTCAAGGCTATTGTACATGGCTGTAAAACCACTTGTTGATGTTAACATCGTTGGGAATGACTCAACCATTTCATTTCCTCGAGCACGCTTGTGTTCTCCATGATAGTAGACCTAACCACAATGACTCAAAAGGATAAAGCTTTGTCAAGTATCTCCTTCGTGTGTTTAGTCGGAGCAGTGATAAGGCGTCCTAGATAATATGTCTGTTATAAACAAACCAACAGCATGCTGTATCGAAAGAGGTTTAACCAGCCAGATAAGGCAATTAAATATTGATGTGGTGatagtttaaaatgtcaatcaaaatgagcattccacaaaaaaacaatccccttttttttgtttttttttaaacaatttttatgtttattttttaataacataCAAAAGATACAGCTTGCATCATGGACAGTAATAGTAAAGCAGTGATCCAAAAGAACAAAACTCACTTTCATAATTCAAACAACTTGAGGTGATGAACAGGAAGTGTCTCATGTGGTACTGAGAACATGTGTTGAAGTATTGTGTAACATATCCCCTTTAAAATGACATCAGCGTTGAAGCTGCTTTTAAAATAGTGAGAGTGAGAAAATATAATgctcttgttttgttttaatgcagTTCTAGACAGACTGTCcttttcatttcattctgtATGCTCTGTTACAAGTTGTTTATTGCCAAcgttttgtatcttttattttcctattctTTTAACCGTGTTATTTATCAATTATGTTCTGTATTCTTTtctgcatactgtatgtttttcttGCTTTCTTCGCCAATTTCTAATTCCATCCATCTCCTATTCCACATGTTTGTATTATTCCCCAACAAGTTCTCTTGATTTAGAGTGACTGATCTGACAGACTGTTCCACATGTTGCTCTGCTTCCTGAAAGGGGGTTTCTGCTCCAAAATGCAGCTTTATACACCTCTCATCTTCTTGTAAAGATGTCATTATCAGAAACATGTCTTCAGATATTACAGATAATCTTGTaaaaagattacattttaataaatgggAGGGTGAAATACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU196734 False 383 lncRNA 0.33 2 24233641 24285356
TU196737 False 380 lncRNA 0.48 2 24289943 24332632
XM_039822589.1 True 3961 mRNA 0.38 8 24284728 24363065

Neighbor

gene id symbol gene type direction distance location
LOC120573098 NA coding downstream 47419 24175463 ~ 24186222 (-)
LOC120573320 NA coding downstream 82959 24145718 ~ 24150682 (-)
tmem185 tmem185a coding downstream 107490 24115915 ~ 24126151 (-)
exoc6b LOC102292959 coding downstream 218133 23882285 ~ 24015508 (-)
LOC120572138 NA coding downstream 370789 23860091 ~ 23862852 (-)
LOC120573110 NA coding upstream 668354 25031419 ~ 25035667 (-)
LOC120573116 NA coding upstream 682209 25045274 ~ 25051525 (-)
LOC120573101 NA coding upstream 751629 25114694 ~ 25116583 (-)
LOC120573117 NA coding upstream 968871 25331936 ~ 25335470 (-)
LOC120573112 NA coding upstream 981246 25344311 ~ 25346710 (-)
G145704 NA non-coding downstream 150628 24029651 ~ 24083013 (-)
LOC120573481 NA non-coding downstream 362555 23870127 ~ 23871086 (-)
G145670 NA non-coding downstream 387163 23845565 ~ 23846478 (-)
G145635 NA non-coding downstream 465868 23767188 ~ 23767773 (-)
G145628 NA non-coding downstream 572993 23660315 ~ 23660648 (-)
LOC120573135 NA non-coding upstream 5613 24368678 ~ 24932188 (-)
G145947 NA non-coding upstream 108978 24472043 ~ 24472242 (-)
G145949 LOC103363179,LOC102783942,LOC102197357,LOC102310222 non-coding upstream 126929 24489994 ~ 24492483 (-)
G145955 gucy2f,LOC101074569,LOC106929251,LOC103480256,LOC103154685 non-coding upstream 141012 24504077 ~ 24508073 (-)
G145944 NA non-coding upstream 153945 24517010 ~ 24538191 (-)
LOC120572219 NA other downstream 93221 24132226 ~ 24140420 (-)
LOC120572715 NA other downstream 158605 24055000 ~ 24075036 (-)
LOC120572139 NA other downstream 378373 23849670 ~ 23855268 (-)
G145509 trpc5,LOC103389248 other downstream 1416018 22814906 ~ 22817623 (-)
G145342 NA other downstream 2003139 22230059 ~ 22230502 (-)
col4a5 col4a5,LOC106608922 other upstream 189087 24552152 ~ 24642084 (-)
G146008 NA other upstream 617182 24980247 ~ 24980952 (-)
G145983 NA other upstream 627143 24990208 ~ 25001314 (-)
G145982 NA other upstream 645949 25009014 ~ 25014765 (-)
G146021 NA other upstream 709395 25072460 ~ 25072943 (-)

Expression


Co-expression Network