LOC120572174


Basic Information

Item Value
gene id LOC120572174
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 25541078 ~ 25547026 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU197185
AGacgaagaggagaggaggtgaaGATGTTGGCGACGGTGAAGGTATTCCTGCTGATTTGGGCCGTCGGTGCTGCAGTCATTTTAACAACGGCAGACAATGATGAAAATACTGAAACAGATGATACAGATGATGATTATTCCTTCTTCGGCAGTGGTGAATTAAACGTTTCCCTTTTCATACCTGAAAACTTTGGGACGTTGCAACCGCCATGGGTAGATGAAGAAGACCtgccctctccttcctcctcaacCATAGACACGTCCTCCAGCTCATTTACAGCTAACTTCAACCCACTCTGTCTGGTCTATGTTCTCTTGCTTTTGTTATGTTAGCATAGTTAGAAGTTTAGATATTCACTCACATTCACCTGTGCAAAATAAGGATTTAAATTGCCTCTATTGTCGGACATCaagacatctttttttttttatcacctaTGGACGTCCACTGCTGTGGAAATCATTGAATGGGTCACCTaatgctatgccctgttacgtcctgctataccctgcagtgccctgctacgccctgtaacgccctgcagtgccctgcagtgccctgctatgccatgaactactattaactactatttctagtcatagttcaattatctttattgtgaatattattgccactgttcatcaccccccccccaaccggcaccgtcagacaccgcctaccaagagcctgggtctgtcccaggtttctccctaaaagggaggttttcctcgccactgtcacactaaatgcttgctcttgggggaattactggaattgttgggtctttgcaaattatagtgtggtctatactctatctgtaaagtgtcctgagataactgtTATTATGATTtgttactataaataaaattcaattgAACTGAATTAAAAGCATAAAATTCCTGCCAGCCTTAAAGTCCCAGTTTCTCATTTCATCTTATGGTACATGTCCACTGTGGCGTTGTTTGACGGCAGGGATTACCCCGCTTCCCAGCATTACACGCCACTGTCAGTTATCAGTTTCTCTTCAATGGCCGCTGACAAGAGAAGAAAACAGGCTCCGCCCTCCGACAGCCACGATgcctgcagctgattggacaaaggCTTCATGTGGGAGCAGTCTACTCCCCCggatttcaaaacagaccaacatggcggctcgtttggaCATTTTTGCTTATTTTACTTACATAGATCACTGAAATGGGTTTCTGTAGTAGCC
>TU197186
AGacgaagaggagaggaggtgaaGATGTTGGCGACGGTGAAGGTATTCCTGCTGATTTGGGCCGTCGGTGCTGCAGTCATTTTAACAACGGCAGACAATGATGAAAATACTGAAACAGATGATACAGATGATGATTATTCCTTCTTCGGCAGTGGTGAATTAAACGTTTCCCTTTTCATACCTGAAAACTTTGGGACGTTGCAACCGCCATGGGTAGATGAAGAAGACCtgccctctccttcctcctcaagTAACCCTGTTCTCCTCTGGTCTACATCCACTTGTTCTAGTTATTTTAGCACAGTTATAACTAACGTAATGCTACATGTCAGCCAATCTGTCTGACTCTTTAAAAAATTTGGGGAAGGTTTACCATCCATCTAGTTGGATGCTTGGTCGCTGCGCTATcttcatcgtgttaaacccgccaatagcacgccaggtggataagccagtttgtgattggtccccgcagatttgtaacggaagcaggatagataaacgtacaggtttccagcctgagctgcaaaGAGAAATCAAgactgggtttacccagtctaccaTCCAGCAACTCCAAGCGCCAAACAGCC
>XR_005641379.1
TGCGTGGTTAGCTACAGTAGTTCCTGTTTTAACCTCAATAAACACTCAGACACAGATGTGAGGTAATAGAGATACGGTGCCAGacgaagaggagaggaggtgaaGATGTTGGCGACGGTGAAGGTATTCCTGCTGATTTGGGCCGTCGGTGCTGCAGTCATTTTAACAACGGCAGACAATGATGAAAATACTGAAACAGATGATACAGATGATGATTATTCCTTCTTCGGCAGTGGTGAATTAAACGTTTCCCTTTTCATACCTGAAAACTTTGGGACGTTGCAACCGCCATGGGTAGATGAAGAAGACCtgccctctccttcctcctcaacCATAGACACGTCCTCCAGCTCATTTACAGCTAACTTCAACCCACTCTGTCTGGTCTATGTTCTCTTGCTTTTGTTATGTTAGCATAGTTAGAAGTTTAGATATTCACTCACATTCACCTGTGCAAAATAAGGATTTAAATTGCCTCTATTGTCGGACATCaagacatctttttttttttatcacctaTGGACGTCCACTGCTGTGGAAATCATTGAATGGGTCACCTaatgctatgccctgttacgtcctgctataccctgcagtgccctgctacgccctgtaacgccctgcagtgccctgcagtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU197185 True 1220 TUCP 0.45 3 25541078 25546945
TU197186 False 590 TUCP 0.46 2 25542914 25546945
XR_005641379.1 False 638 lncRNA 0.45 3 25541741 25547026

Neighbor

gene id symbol gene type direction distance location
LOC120572167 NA coding downstream 1590 25524334 ~ 25539488 (-)
LOC120573128 NA coding downstream 29702 25498333 ~ 25511376 (-)
LOC120573123 LOC104955241 coding downstream 94444 25445417 ~ 25446634 (-)
LOC120573112 NA coding downstream 194368 25344311 ~ 25346710 (-)
LOC120573117 NA coding downstream 205608 25331936 ~ 25335470 (-)
LOC120572157 LOC103362425,LOC105920088,LOC107090172,LOC103480892 coding upstream 1017 25548043 ~ 25579123 (-)
LOC120572166 NA coding upstream 78643 25625669 ~ 25637143 (-)
LOC120572164 NA coding upstream 95313 25642339 ~ 25644506 (-)
LOC120572163 NA coding upstream 103280 25650306 ~ 25652167 (-)
LOC120572165 NA coding upstream 111582 25658608 ~ 25660622 (-)
G146044 NA non-coding downstream 254297 25206424 ~ 25286781 (-)
G146022 NA non-coding downstream 408051 25082359 ~ 25133027 (-)
G145964 NA non-coding downstream 721029 24727481 ~ 24820049 (-)
G145973 col4a6 non-coding downstream 727031 24813269 ~ 24814047 (-)
G145962 NA non-coding downstream 988990 24551737 ~ 24552088 (-)
G146111 LOC102788603 non-coding upstream 67637 25614663 ~ 25616566 (-)
G146172 NA non-coding upstream 122776 25669802 ~ 25671820 (-)
G146178 NA non-coding upstream 157133 25704159 ~ 25704621 (-)
G146179 NA non-coding upstream 157799 25704825 ~ 25705357 (-)
G146181 NA non-coding upstream 214529 25761555 ~ 25776631 (-)
G146055 NA other downstream 24670 25314851 ~ 25516408 (-)
G146021 NA other downstream 468135 25072460 ~ 25072943 (-)
G145982 NA other downstream 526313 25009014 ~ 25014765 (-)
G145983 NA other downstream 539764 24990208 ~ 25001314 (-)
G146008 NA other downstream 560126 24980247 ~ 24980952 (-)
G146278 NA other upstream 368552 25915578 ~ 25990471 (-)
G146256 uxt other upstream 416830 25963856 ~ 26033117 (-)
G146260 NA other upstream 426160 25973186 ~ 26033802 (-)
LOC120573202 NA other upstream 956642 26503668 ~ 26510694 (-)
LOC120573716 NA other upstream 957907 26504933 ~ 26505027 (-)

Expression


Co-expression Network