G148797


Basic Information

Item Value
gene id G148797
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 34678148 ~ 34737726 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU201235
cTTTAATGTTACCTTTTGTGATATTAAATTCAACACTTTCGTAATAATAtattgtaaaacacatttttcatctgtgaaatgttattccatgctgttttatttagcatttcTTTTACATGAACATCCAAAAGCAGTACAAAAATCTTTCTCTATGAGTCTTTAAGATCAGTTCTTCgtcccaagatggcggcggcacAGACGCAGTTTAAACACATAAACTGTACTGAACTGTACTGTACTGAACTCAGAATATTATATCACAGGAATAAAAGCTAATTTTGAGTGGATTTAATCCCTTCAAAAGGGAATATATAGTCATAGCCAGGttaacatccatgctgttcagaAGATTGGCTCAGAAACATGTTCACAACAAGGCAGTGTGAATGTGCTTGTGAGATTTAAGGTTAGTACTCTGAGAAAAAGTTTttccacattgttcacagcagtacggcttctctccagtgtgtaCACGTATGTGGTTTTTAAGGCTACTACTCAGAGAAAAGGTTTTACCACATAAATCACAGCTGTATGGTTTAtgtccagtgtgaatgcgttgatgttttTTAAGGCTACCACTCTCAGAAAAACCTtgcccacattgttcacaccagtacggcttctctccagtgtgaacacgtcggtgGTTTTCTAGGCTACCACTCCGACTAaaggttttcccacattgttcacaccagtacggcttctctccagtgtgaatgcattgATGTCTTTTTAGGGTACCCCgtcgtgtgaaagctgccccacattgatcacagctgtacggcttctctccagtgtgaaagCGTTGATGTATTTTTAGGGTACTCTGTTgggtgaaagctgccccacattgatcacagctgtacggcttctctccagtgtgagtGCGTTGATGTATTTTTAGGTTACcctgttgtgtgaaagctgccccacattgatcacagctgtgaagattctctccagtgtgaatgcgttgatggttTTTTAGGTTACACTGGtatgtgaaagctgccccacattgatcacagctgtacggcttctctccagtgtgaatgcgtagATGCATTTTTAGGTTACTCTggtgtgtgaaagctgccccacattgatcacagctgtgaagattctctccagtgtgaaggcgTTGATGTCTTCTTAGGTCACTCTgtcgtgtgaaagctgccccacattgatcacagctgtacggcttctctccagtgtgaatgagtTGATGTCTTTTAAGTTTATCCTGTTGTGTGAATGCTGCCCCACATTTATCACAGCTGTGTagattctctccagtgtgaactctctgatgaatctttaaatatctTGATGTTCTGAAGGATTTGTGACAGTGTTGACAGTGGTGACGTTTGGGTCCCTCTCCTctccgtttctcctcctcctcctccttcctcttgctccctcgctcctctgagtctcccgaggcctcactgacaactttcctcttgccctccttctttttctcctttttctccttctccttgtgtttctgcatgtactcTGTGATAAGGTCAGGGCAGTACAGGTTGACTTGCGGCTCCCATGCGTTATCCTCACTGGAAAGGTgagtgcagacagaagaaaatctccTCAGGCATTGTTTTTGGGCAATACATTCTCACTCTAATTTgtattattccttttttctaTTGCAATTTTGTAAGGTTATTTGCGGGTCTGCgacttatatatacatatactagagctgtcaatcttcctctataataccattcgaattcc

Function

GO: NA

KEGG:

id description
ko03013 Nucleocytoplasmic transport
ko03460 Fanconi anemia pathway

RNA

RNA id representative length rna type GC content exon number start site end site
TU201235 True 1770 lncRNA 0.43 3 34678148 34737726

Neighbor

gene id symbol gene type direction distance location
LOC120572811 NA coding upstream 10304 34653680 ~ 34667844 (+)
LOC120572763 NA coding upstream 26732 34643006 ~ 34651416 (+)
LOC120572771 NA coding upstream 55013 34568896 ~ 34623135 (+)
LOC120572847 NA coding upstream 111857 34550882 ~ 34566291 (+)
LOC120572845 LOC106676760 coding upstream 221135 34455352 ~ 34457013 (+)
LOC120572836 NA coding downstream 127345 34865071 ~ 34890170 (+)
LOC120572822 NA coding downstream 135959 34873685 ~ 34882304 (+)
LOC120572765 LOC101480284 coding downstream 274554 35012280 ~ 35022647 (+)
LOC120572630 NA coding downstream 290434 35028160 ~ 35032775 (+)
LOC120572841 NA coding downstream 320450 35058176 ~ 35065185 (+)
G148777 NA non-coding upstream 120778 34509266 ~ 34557370 (+)
G148755 NA non-coding upstream 121056 34537069 ~ 34557092 (+)
G148754 NA non-coding upstream 174111 34496675 ~ 34504037 (+)
G148762 NA non-coding upstream 234630 34442903 ~ 34443518 (+)
G148739 NA non-coding upstream 311647 34365013 ~ 34366501 (+)
G148822 NA non-coding downstream 83052 34820778 ~ 34891620 (+)
LOC120573017 NA non-coding downstream 295050 35032776 ~ 35037939 (+)
G149100 NA non-coding downstream 308209 35045935 ~ 35049215 (+)
G149126 LOC106904641,LOC103129609,LOC105922223,LOC103371092 non-coding downstream 404860 35142586 ~ 35147864 (+)
G149127 NA non-coding downstream 412941 35150667 ~ 35154004 (+)
plod3 plod3,LOC103389255,LOC106511660,LOC100697420,LOC103371102 other upstream 205723 34428156 ~ 34472425 (+)
G148671 NA other upstream 793249 33875923 ~ 33884899 (+)
LOC120573051 NA other upstream 810266 33728371 ~ 33867882 (+)
LOC120572929 NA other upstream 1014920 33637436 ~ 33663228 (+)
G148151 NA other upstream 1392955 33239099 ~ 33285193 (+)
G148730 NA other downstream 37815 34775541 ~ 34800508 (+)
LOC120572627 NA other downstream 70325 34808051 ~ 34897531 (+)
LOC120572767 LOC101480284,LOC102312368,LOC100706304,LOC102797228,LOC101468181 other downstream 214772 34952498 ~ 34967432 (+)
LOC120572831 NA other downstream 335395 35073121 ~ 35088095 (+)
G149096 NA other downstream 384996 35122722 ~ 35128203 (+)

Expression


Co-expression Network