LOC120573010


Basic Information

Item Value
gene id LOC120573010
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 35168089 ~ 35220675 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU201637
GATAACTGCTGTGCTCATCTGTGGGACGAGACCCTTCTGACTTCAGGACGTCCGTCTGAATTAGTTCCCCCTGAAGAACAAGAATGAGTTCTCCACAAAAGGGGGTCGTTCCTGACGAAGAAACAAGACCAGGCAGCGCGGAAGATCATGAGGTTCCTGAGACGCTGcagacacagGACCTCATCCGTCAGGACCCTTGGCCGTGGCGCACGGGAGGCTGGTGAACGGGTCTCGGCTTCCCCCGCTTGCACCTGCTCAGGCTCTGGGTGGGGCGCAAGGATAGGCTCAGGCTCCTGGATGTGCTGACGGGGAGATGCCTCGAGGGCGCTGGGGCCTGCAGTGCCATCGTCTGCAAAACAATAGAgcaaaattttaataaaat
>XR_005641584.1
CTCTCTTGTTGgctgtttcctcctctcttgttggctgtttcctctcctcttgttggctgtttcctctcctctcttgttggctgtttcctctcctcttgttgGCTGTTTCTGAGAAGTAAAGCGTGGAAATCTTGTGGAGTCAACACGTTGGAAGAATCGCTCATCTGTGGGACGAGACCCTTCTGACTTCAGGACGTCCGTCTGAATTAGTTCCCCCTGAAGAACAAGAATGAGTTCTCCACAAAAGAAAccgagaggaagaggagaaaaacgtcaccactgtcag

Function

GO: NA

KEGG:

id description
ko00190 Oxidative phosphorylation
ko04714 Thermogenesis
ko05010 Alzheimer disease
ko05012 Parkinson disease
ko05016 Huntington disease

RNA

RNA id representative length rna type GC content exon number start site end site
TU201637 True 382 lncRNA 0.57 4 35168089 35220675
XR_005641584.1 False 286 lncRNA 0.48 3 35196966 35211276

Neighbor

gene id symbol gene type direction distance location
LOC120572935 NA coding upstream 34980 35130259 ~ 35133109 (+)
LOC120572631 NA coding upstream 50316 35112479 ~ 35117773 (+)
LOC120572841 NA coding upstream 102904 35058176 ~ 35065185 (+)
LOC120572630 NA coding upstream 135314 35028160 ~ 35032775 (+)
LOC120572765 LOC101480284 coding upstream 145442 35012280 ~ 35022647 (+)
LOC120572786 NA coding downstream 5071 35225746 ~ 35249690 (+)
LOC120572797 LOC101882356 coding downstream 42793 35263468 ~ 35267820 (+)
LOC120572777 LOC104964776 coding downstream 103708 35324383 ~ 35329220 (+)
LOC120572927 NA coding downstream 247161 35467836 ~ 35475658 (+)
LOC120573494 NA coding downstream 339775 35560450 ~ 35574268 (+)
G149129 NA non-coding upstream 5465 35155187 ~ 35162624 (+)
G149127 NA non-coding upstream 14085 35150667 ~ 35154004 (+)
G149126 LOC106904641,LOC103129609,LOC105922223,LOC103371092 non-coding upstream 20225 35142586 ~ 35147864 (+)
G149100 NA non-coding upstream 118874 35045935 ~ 35049215 (+)
LOC120573017 NA non-coding upstream 130150 35032776 ~ 35037939 (+)
G149180 NA non-coding downstream 238701 35459376 ~ 35459934 (+)
G149184 NA non-coding downstream 272529 35493204 ~ 35551942 (+)
LOC120572998 NA non-coding downstream 458131 35678806 ~ 35679539 (+)
G149211 NA non-coding downstream 479851 35700526 ~ 36038269 (+)
G149194 NA non-coding downstream 509215 35729890 ~ 36017601 (+)
G149095 NA other upstream 25603 35136144 ~ 35142486 (+)
G149096 NA other upstream 39886 35122722 ~ 35128203 (+)
LOC120572831 NA other upstream 79994 35073121 ~ 35088095 (+)
LOC120572767 LOC101480284,LOC102312368,LOC100706304,LOC102797228,LOC101468181 other upstream 200657 34952498 ~ 34967432 (+)
LOC120572627 NA other upstream 270558 34808051 ~ 34897531 (+)
LOC120572790 NA other downstream 41477 35262152 ~ 35315419 (+)
G149172 NA other downstream 205574 35426249 ~ 35429043 (+)
G149187 NA other downstream 567444 35788119 ~ 36262372 (+)
LOC120572849 NA other downstream 896623 36117298 ~ 36130103 (+)
LOC120572889 NA other downstream 1118956 36339631 ~ 36343826 (+)

Expression


Co-expression Network