LOC120572790


Basic Information

Item Value
gene id LOC120572790
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 35262152 ~ 35315419 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU201639
GCAGCGTATTGGCGCTCCACAGTGGGAGCGCTTGCTGTATGTCGGTGGCTGTGCCGTGgtgaaaactaaacagaaaaagGCGGGGATAGTTTCTTTGTTTGGCAGCAACGTGAAGAAAACAAACGTACCCGGGAACACGGTGCAGGGCGAGGAGACGGAACGAGGTCGGCACATGAAGTTAGCAGACAGTTAGCATGGACTCTACAGGACAATATTCCTAACCTGGAGGAATTCTTTCCATCTGTGGACACTTCCGGACTACAGGAATATTAATAAGACAGGAAAGGACGGGGACTGGAGGTTTAGGACAGACTCCAGCTCATCTGTGGGACGAGACCCTTCTGACTTCAGGACGTCCGTCTGAATTAGTTCCCCCTGAAGAACAAGAATGAGTTCTCCACAAAAGGGGGTCGTTCCTGATGAGGAAACAAGGCCAGGCAGCGCGGAAGATCATGAGGTTCCTGAGACGCTGcagacacagAGGCTGGCGGTATGGCATCATGACGGTGACCGGATGCTGCAAGCATGGGTATCCCCCCCCATCTCCAAGGAGAAAGAAGCCAGCTGGTGGATACAGACACTCCTTGTGCATCGGTGACCTCCGAAGGACAAGGGCGTCATGGACTGACCCTGTGTTGCCAAAGTGGGAGAATTCAGATGTGGCATCCATCTATTGCACCAGCCACAAAGCGGAAGGCCTCATGACCAGCCATACGAGCAAAGACAGCCCCCACTTCCCCCATCTCATCTGGCTTGGGGAAATGAATTATATTGTGCAGGATGGCCATCATCTCTTCCACTACACTGTGAACTAGTCGTCCAACAGTGGCTCTCAGAATGCCAAATATGTCTGCTGTGACTCTGTACGAGGTGCCACATGCGAGCCAGTACAGACAAACCGCTATGTCGATCTCATGGCTCCATCCGTGTGGCTTTTGCCGTGGCAACATCTGGACCAGCACATTGATGGTGTCCCAGGAGAGCCTAAAGGCTGGCTTTAGGTCAGCCTCTGAGAAAAATGTAACCAGGATAGGCACGCAGTCATTCACTTGTGCATATCTCTGAGAAGGAGTTTGAtcctgtttaaaaaagaaaaatacatatttaatatcAACTGTTGTCATTCTAATTGATTATTAATCTTGCAATGTCTTTTTTTGCTTATTCATGAATTAACGTAGATTTCATGTATTtaatagtgctgtcaaacgattaaaatatttaatcacgattaatcgcattaatgtcatagttaactcacgattaatcgcaattaatcacacatttttatctatttcaaAAGTCCCTTGACTTCTATTTGTCCCattatattttctcattttaatgatcttatcaacatggaaaagtgaattggct
>XM_039822229.1
CAAACGTACCCGGGAACACGGTGCAGCGCGAGGAGACGGAACGAGGTCGGCACATGAAGTTAGCAGACAGTTAGCATGGACTCTACAGGACAATATTCCTAACCTGGAGGAATTCTTTCCATCTGTGGACACTTCCGGACTACAGGAATATTAATAAGACAGGAAAGGACGGGGACTGGAGGTTTAGGACAGACTCCAGCTCATCTGTGGGACGAGACCCTTCTGACTTCAGGACGTCCGTCTGAATTAGTTCCCCCTGAAGAACAAGAATGAGTTCTCCACAAAAGGGGGTCGTTCCTGACGAAGAAACAAGACCAGGCAGTGAGGAAGATCATGAGGTTCCTGAGATGCTGcagacacagAAAccgagaggaagaggagaaaaacgtcaccactgtcagaactgtgacaaatccttcacaacaTCAGGATATTTAAAGAgtcatcagagagttcacactggagagaaaccTTACTGCTGTGATCTTTGTGGGTCAGCTTTCAAACAACAGAGTAacctaaaaacacatcaacgcattcacactggggAAAAACCTTACCGCTGTGATCTATGTGGGACAGCTTTCAGACAACAGGGACAGCTAAAAagccatcaacgcattcacactggagagaagccgtacagctgtgaacaatgtgggaaaaccttttctgatAGTGGTGACCTTAAAAaacaccagcgcattcacactggagaaaagccatacagctgtgaacaatgtggggaaACGTTTTCTCGAAGTAGTtaccttaaatctcaccagcgcattcacaccggagagaagccgtacagctgtgagcAATGTGGGGAAACGTTTTCTCAACGAAGTAACCTTAAATgtcaccagcgcattcacactggagagaagccgtactggtgtgaacaatgtgggaaaaccttTTCTGAAAGTGGTGTCCTTAAAAAACACCAactcattcacactggagagaagccgtacagctgtgaacaatgtggaaAAACGTTTTCTCAGAGTAGTAGCCTTAAATGTCACCAGcgccttcacactggagagaagccgtacagctgtgatcagtGTGGTGAAACTTTTTCTCGTGGTGATAcccttaaatctcaccagcgcaATCACACTGGAGAGATgccgtactggtgtgatcaatgtggggaaATGTTTTCTCAGAGAAGGTACCTTAAAAaacaccagcgcattcacactggagagaggccgtactggtgtgatcaatgtggggaagtgttttctcagagtagtaaccttaaatctcaccagcgcattcacactggagagaagccgtacagctgtgatcaatgtggtgAAACTTTTTCTCGTGGTGATACCCTTAAAAAACACcagcgtgttcacactggagagaagccgtacgggtgtgatcaatgtgggaaaATGTTTTCTCAGAGTGGTAGCCTTAAAAAACACCAGCGTATTCACACTGCATCGTTGTGAACATGTTTCAGAgctaggcctgtcgcgatagtcaataaatcaattaatcgcgcgataaaaaaaattagcttGATAATTTTTCTgaccgcgataatttccatttgcatgcttgtttgttttcctttctctctctacctctctacctctctacctctctaccaaagagactggatgaCCACTCTCTGTTCCTTACTGTAAcaaggagtgaaccctctttgTCAGTCACATGGTCTTTGTGTGGGGAGGCGGGACTACTCCTGACTGAGAGAGTTGGACCAGGGTTTCCaacagcactttgcagttaaggtgCAATCAAAAGCCACATAGAAATAGATagatataatttattaattatacattatttacattttagtgtttcataaataattgttaaatgtagtaAAGTCTTTAGTCCATTGCACAAACACTCGAGGAATGCTGCAAACATTTGACAGCCAGTACGAATTGCCTGGgagaacatactgtatgtgtcacaAACAACAGAGACGAaatactaaaggagatcaaagacatattgtggatatttaaaatgtcttccggttccagtgttaa
>XM_039822230.1
ACAGCTGCCATGATTGACGTGTTGATAGCCAATGAGAGCTGTTTCTAAGATGGCTGCTCAGAGAGATGACGCAGCGTATTGGCGCTCCACAGTGGGAGCGCTTGCTGTATGTCGGTGGCTGTGCCGTGgtgaaaactaaacagaaaaagGCGGGGATAGTTTCTTTGTTTGGCAGCAACGTGAAGAAAACAAACGTACCCGGGAACACGGTGCAGGGCGAGGAGACGGAACGAGGTCGGCACATGAAGTTAGCAGACAGTTAGCATGGACTCTACAGGACAATATTCCTAACCTGGAGGAATTCTTTCCATCTGTGGACACTTCCGGACTACAGGAATATTAATAAGACAGGAAAGGACGGGGACTGGAGGTTTAGGACAGACTCCAGCTCATCTGTGGGACGAGACCCTTCTGACTTCAGGACGTCCGTCTGAATTAGTTCCCCCTGAAGAACAAGAATGAGTTCTCCACAAAAGCTCATCTGTGGGACGAGACCCTTCTGACTTCAGGACGTCCGTCTGAATTAGTTCCCCCTGAAGAACAAGAATGAGTTCTCCACAAAAGGGGGTCGTTCCTGACGAAGAAACAAGACCAGGCAGTGAGGAAGATCATGAGGTTCCTGAGATGCTGcagacacagAAAccgagaggaagaggagaaaaacgtcaccactgtcagaactgtgacaaatccttcacaacaTCAGGATATTTAAAGAgtcatcagagagttcacactggagagaaaccTTACTGCTGTGATCTTTGTGGGTCAGCTTTCAAACAACAGAGTAacctaaaaacacatcaacgcattcacactggggAAAAACCTTACCGCTGTGATCTATGTGGGACAGCTTTCAGACAACAGGGACAGCTAAAAagccatcaacgcattcacactggagagaagccgtacagctgtgaacaatgtgggaaaaccttttctgatAGTGGTGACCTTAAAAaacaccagcgcattcacactggagaaaagccatacagctgtgaacaatgtggggaaACGTTTTCTCGAAGTAGTtaccttaaatctcaccagcgcattcacaccggagagaagccgtacagctgtgagcAATGTGGGGAAACGTTTTCTCAACGAAGTAACCTTAAATgtcaccagcgcattcacactggagagaagccgtactggtgtgaacaatgtgggaaaaccttTTCTGAAAGTGGTGTCCTTAAAAAACACCAactcattcacactggagagaagccgtacagctgtgaacaatgtggaaAAACGTTTTCTCAGAGTAGTAGCCTTAAATGTCACCAGcgccttcacactggagagaagccgtacagctgtgatcagtGTGGTGAAACTTTTTCTCGTGGTGATAcccttaaatctcaccagcgcaATCACACTGGAGAGATgccgtactggtgtgatcaatgtggggaaATGTTTTCTCAGAGAAGGTACCTTAAAAaacaccagcgcattcacactggagagaggccgtactggtgtgatcaatgtggggaagtgttttctcagagtagtaaccttaaatctcaccagcgcattcacactggagagaagccgtacagctgtgatcaatgtggtgAAACTTTTTCTCGTGGTGATACCCTTAAAAAACACcagcgtgttcacactggagagaagccgtacgggtgtgatcaatgtgggaaaATGTTTTCTCAGAGTGGTAGCCTTAAAAAACACCAGCGTATTCACACTGCATCGTTGTGAACATGTTTCAGAgctaggcctgtcgcgatagtcaataaatcaattaatcgcgcgataaaaaaaattagcttGATAATTTTTCTgaccgcgataatttccatttgcatgcttgtttgttttcctttctctctctacctctctacctctctacctctctaccaaagagactggatgaCCACTCTCTGTTCCTTACTGTAAcaaggagtgaaccctctttgTCAGTCACATGGTCTTTGTGTGGGGAGGCGGGACTACTCCTGACTGAGAGAGTTGGACCAGGGTTTCCaacagcactttgcagttaaggtgCAATCAAAAGCCACATAGAAATAGATagatataatttattaattatacattatttacattttagtgtttcataaataattgttaaatgtagtaAAGTCTTTAGTCCATTGCACAAACACTCGAGGAATGCTGCAAACATTTGACAGCCAGTACGAATTGCCTGGgagaacatactgtatgtgtcacaAACAACAGAGACGAaatactaaaggagatcaaagacatattgtggatatttaaaatgtcttccggttccagtgttaa
>XM_039822231.1
TACAGCTGCCATGATTGACGTGTTGATAGCCAATGAGAGCTGTTTCTAAGATGGCTGCTCAGAGAGATGACGCAGCGTATTGGCGCTCCACAGTGGGAGCGCTTGCTGTATGTCGGTGGCTGTGCCGTGgtgaaaactaaacagaaaaagGCGGGGATAGTTTCTTTGTTTGGCAGCAACGTGAAGAAAACAAACGTACCCGGGAACACGGTGCAGGGCGAGGAGACGGAACGAGGTCGGCACATGAAGTTAGCAGACAGTTAGCATGGACTCTACAGGACAATATTCCTAACCTGGAGGAATTCTTTCCATCTGTGGACACTTCCGGACTACAGGAATATTAATAAGACAGGAAAGGACGGGGACTGGAGGTTTAGGACAGACTCCAGCTCATCTGTGGGACGAGACCCTTCTGACTTCAGGACGTCCGTCTGAATTAGTTCCCCCTGAAGAACAAGAATGAGTTCTCCACAAAAGCTCATCTGTGGGACGAGACCCTTCTGACTTCAGGACGTCCGTCTGAATTAGTTCCCCCTGAAGAACAAGAATGAGTTCTCCACAAAAGAAAccgagaggaagaggagaaaaacgtcaccactgtcagaactgtgacaaatccttcacaacaTCAGGATATTTAAAGAgtcatcagagagttcacactggagagaaaccTTACTGCTGTGATCTTTGTGGGTCAGCTTTCAAACAACAGAGTAacctaaaaacacatcaacgcattcacactggggAAAAACCTTACCGCTGTGATCTATGTGGGACAGCTTTCAGACAACAGGGACAGCTAAAAagccatcaacgcattcacactggagagaagccgtacagctgtgaacaatgtgggaaaaccttttctgatAGTGGTGACCTTAAAAaacaccagcgcattcacactggagaaaagccatacagctgtgaacaatgtggggaaACGTTTTCTCGAAGTAGTtaccttaaatctcaccagcgcattcacaccggagagaagccgtacagctgtgagcAATGTGGGGAAACGTTTTCTCAACGAAGTAACCTTAAATgtcaccagcgcattcacactggagagaagccgtactggtgtgaacaatgtgggaaaaccttTTCTGAAAGTGGTGTCCTTAAAAAACACCAactcattcacactggagagaagccgtacagctgtgaacaatgtggaaAAACGTTTTCTCAGAGTAGTAGCCTTAAATGTCACCAGcgccttcacactggagagaagccgtacagctgtgatcagtGTGGTGAAACTTTTTCTCGTGGTGATAcccttaaatctcaccagcgcaATCACACTGGAGAGATgccgtactggtgtgatcaatgtggggaaATGTTTTCTCAGAGAAGGTACCTTAAAAaacaccagcgcattcacactggagagaggccgtactggtgtgatcaatgtggggaagtgttttctcagagtagtaaccttaaatctcaccagcgcattcacactggagagaagccgtacagctgtgatcaatgtggtgAAACTTTTTCTCGTGGTGATACCCTTAAAAAACACcagcgtgttcacactggagagaagccgtacgggtgtgatcaatgtgggaaaATGTTTTCTCAGAGTGGTAGCCTTAAAAAACACCAGCGTATTCACACTGCATCGTTGTGAACATGTTTCAGAgctaggcctgtcgcgatagtcaataaatcaattaatcgcgcgataaaaaaaattagcttGATAATTTTTCTgaccgcgataatttccatttgcatgcttgtttgttttcctttctctctctacctctctacctctctacctctctaccaaagagactggatgaCCACTCTCTGTTCCTTACTGTAAcaaggagtgaaccctctttgTCAGTCACATGGTCTTTGTGTGGGGAGGCGGGACTACTCCTGACTGAGAGAGTTGGACCAGGGTTTCCaacagcactttgcagttaaggtgCAATCAAAAGCCACATAGAAATAGATagatataatttattaattatacattatttacattttagtgtttcataaataattgttaaatgtagtaAAGTCTTTAGTCCATTGCACAAACACTCGAGGAATGCTGCAAACATTTGACAGCCAGTACGAATTGCCTGGgagaacatactgtatgtgtcacaAACAACAGAGACGAaatactaaaggagatcaaagacatattgtggatatttaaaatgtcttccggttccagtgttaa
>XR_005641493.1
aaagGCGGGGATAGTTTCTTTGTTTGGCAGCAACGTGAAGAAAACAAACGTACCCGGGAACACGGTGCAGGGCGAGGAGACGGAACGAGGTCGGCACATGAAGTTAGCAGACAGTTAGCATGGACTCTACAGGACAATATTCCTAACCTGGAGGAATTCTTTCCATCTGTGGACACTTCCGGACTACAGGAATATTAATAAGACAGGAAAGGACGGGGACTGGAGGTTTAGGACAGACTCCAGCTCATCTGTGGGACGAGACCCTTCTGACTTCAGGACGTCCGTCTGAATTAGTTCCCCCTGAAGAACAAGAATGAGTTCTCCACAAAAGGGGGTCGTTCCTGATGAGGAAACAAGGCCAGGCAGCGCGGAAGATCATGAGGTTCCTGAGACGCTGcagacacagAGGCTGGCGGTATGGCATCATGACGGTGACCGGATGCTGCAAGCATGGGTATCCCCCCCCATCTCCAAGGAGAAAGAAGCCAGCTGGTGGATACAGACACTCCTTGTGCATCGGTGACCTCCGAAGGACAAGGGCGTCATGGACTGACCCTGTGTTGCCAAAGTACGTATCCAGGAATTTCCCTGTGCTGTCACACACGAAGGATAATTGAAGGGTAGCACCTCTTTTGTGGTTCAGCAGGTGGGAGAATTCAGATGTGGCATCCATCTATTGCACCAGCCACAAAGCGGAAGGCCTCATGACCAGCCATACGAGCAAAGACAGCCCCCACTTCCCCCATCTCATCTGGCTTGGGGAAATGAATTATATTGTGCAGGATGGCCATCATCTCTTCCACTACACTGTGAACTAGTCGTCCAACAGTGGCTCTCAGAATGCCAAATATGTCTGCTGTGACTCTGTACGAGGTGCCACATGCGAGCCAGTACAGACAAACCGCTATGTCGATCTCATGGCTCCATCCGTGTGGCTTTTGCCGTGGCAACATCTGGACCAGCACATTGATGGTGTCCCAGGAGAGCCTAAAGGCTGGCTTTAGGTCAGCCTCTGAGAAAAATGTAACCAGGATAGGCACGCAGTCATTCACTTGTGCATATCTCTGAGAAGGAGTTTGAtcctgtttaaaaaagaaaaatacatatttaatatcAACTGTTGTCATTCTAATTGATTATTAATCTTGCAATGTCTTTTTTTGCTTATTCATGAATTAACGTAGATTTCATGTATTtaata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU201639 False 1377 TUCP 0.46 5 35262223 35285734
XM_039822229.1 False 2054 mRNA 0.44 4 35290137 35315419
XM_039822230.1 True 2331 mRNA 0.45 5 35262153 35315419
XM_039822231.1 False 2257 mRNA 0.45 4 35262152 35315419
XR_005641493.1 False 1201 transcript 0.49 4 35262298 35285555

Neighbor

gene id symbol gene type direction distance location
LOC120572786 NA coding upstream 12462 35225746 ~ 35249690 (+)
LOC120572947 NA coding upstream 49715 35211322 ~ 35212437 (+)
LOC120572778 NA coding upstream 80467 35100719 ~ 35181685 (+)
LOC120572935 NA coding upstream 129043 35130259 ~ 35133109 (+)
LOC120572631 NA coding upstream 144379 35112479 ~ 35117773 (+)
LOC120572777 LOC104964776 coding downstream 8964 35324383 ~ 35329220 (+)
LOC120572927 NA coding downstream 152417 35467836 ~ 35475658 (+)
LOC120573494 NA coding downstream 245031 35560450 ~ 35574268 (+)
LOC120573495 NA coding downstream 337583 35653002 ~ 35675644 (+)
LOC120572944 NA coding downstream 484306 35799725 ~ 35801933 (+)
LOC120573010 NA non-coding upstream 41477 35168089 ~ 35220675 (+)
G149129 NA non-coding upstream 99528 35155187 ~ 35162624 (+)
G149127 NA non-coding upstream 108148 35150667 ~ 35154004 (+)
G149126 LOC106904641,LOC103129609,LOC105922223,LOC103371092 non-coding upstream 114288 35142586 ~ 35147864 (+)
G149100 NA non-coding upstream 212937 35045935 ~ 35049215 (+)
G149180 NA non-coding downstream 143957 35459376 ~ 35459934 (+)
G149184 NA non-coding downstream 177785 35493204 ~ 35551942 (+)
LOC120572998 NA non-coding downstream 363387 35678806 ~ 35679539 (+)
G149211 NA non-coding downstream 385107 35700526 ~ 36038269 (+)
G149194 NA non-coding downstream 414471 35729890 ~ 36017601 (+)
G149095 NA other upstream 119666 35136144 ~ 35142486 (+)
G149096 NA other upstream 133949 35122722 ~ 35128203 (+)
LOC120572831 NA other upstream 174057 35073121 ~ 35088095 (+)
LOC120572767 LOC101480284,LOC102312368,LOC100706304,LOC102797228,LOC101468181 other upstream 294720 34952498 ~ 34967432 (+)
LOC120572627 NA other upstream 364621 34808051 ~ 34897531 (+)
G149172 NA other downstream 110830 35426249 ~ 35429043 (+)
G149187 NA other downstream 472700 35788119 ~ 36262372 (+)
LOC120572849 NA other downstream 801879 36117298 ~ 36130103 (+)
LOC120572889 NA other downstream 1024212 36339631 ~ 36343826 (+)
LOC120572806 NA other downstream 1149042 36464461 ~ 36476242 (+)

Expression


Co-expression Network